Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.6e-64 248.1 121 100.0
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.0e-59 232.3 116 96.6
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 3.3e-54 214.9 116 87.9
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 7.5e-54 213.8 116 87.1
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 7.5e-54 213.8 116 86.2
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.3e-53 213.0 116 86.2
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 1.7e-53 212.6 116 87.1
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 1.7e-53 212.6 116 87.9
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.7e-53 212.6 116 84.5
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 2.2e-53 212.2 116 85.3
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 2.2e-53 212.2 116 86.2
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 2.2e-53 212.2 114 88.6
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 2.8e-53 211.8 114 87.7
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 2.8e-53 211.8 116 86.2
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 2.8e-53 211.8 117 87.2
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.7e-53 211.5 116 87.1
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 3.7e-53 211.5 116 86.2
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 6.3e-53 210.7 116 85.3
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 6.3e-53 210.7 116 85.3
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 6.3e-53 210.7 116 86.2
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 6.3e-53 210.7 116 86.2
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 6.3e-53 210.7 116 86.2
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.1e-52 209.9 116 84.5
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 1.1e-52 209.9 116 86.2
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.1e-52 209.9 114 89.5
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 1.1e-52 209.9 116 85.3
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.4e-52 209.5 116 85.3
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 1.4e-52 209.5 116 84.5
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.8e-52 209.1 116 85.3
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.8e-52 209.1 116 85.3
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 1.8e-52 209.1 116 84.5
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 4.1e-52 208.0 116 83.6
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 4.1e-52 208.0 116 83.6
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 4.1e-52 208.0 116 83.6
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 4.1e-52 208.0 116 83.6
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 5.3e-52 207.6 116 83.6
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 7.0e-52 207.2 116 85.3
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 7.0e-52 207.2 115 83.5
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 7.0e-52 207.2 116 83.6
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 7.0e-52 207.2 122 83.6
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 9.1e-52 206.8 116 84.5
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 9.1e-52 206.8 116 84.5
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.2e-51 206.5 116 82.8
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.2e-51 206.5 116 84.5
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.2e-51 206.5 116 83.6
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.6e-51 206.1 116 81.0
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 1.6e-51 206.1 116 81.0
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.6e-51 206.1 116 83.6
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 2.0e-51 205.7 116 83.6
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 2.0e-51 205.7 116 81.9
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.0e-51 205.7 116 82.8
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 2.0e-51 205.7 116 83.6
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 82.8
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 82.8
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 82.8
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 82.8
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 82.8
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 82.8
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 80.2
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 80.2
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 80.2
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 80.2
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 80.2
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 80.2
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 80.2
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 2.7e-51 205.3 116 83.6
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 3.5e-51 204.9 116 81.9
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 3.5e-51 204.9 116 83.6
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 3.5e-51 204.9 116 82.8
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 5.9e-51 204.1 116 81.0
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 5.9e-51 204.1 116 81.9
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 5.9e-51 204.1 116 82.8
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 5.9e-51 204.1 116 81.9
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.3e-50 203.0 116 80.2
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.3e-50 203.0 120 80.0
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 2.2e-50 202.2 116 82.8
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.9e-50 201.8 116 81.9
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 3.8e-50 201.4 116 80.2
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 3.8e-50 201.4 116 81.9
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 3.8e-50 201.4 114 86.0
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 5.0e-50 201.1 116 83.6
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 5.0e-50 201.1 116 80.2
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 5.0e-50 201.1 116 81.9
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 6.5e-50 200.7 116 81.0
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 6.5e-50 200.7 116 81.9
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 6.5e-50 200.7 116 82.8
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 6.5e-50 200.7 116 80.2
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 8.5e-50 200.3 116 81.0
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 1.1e-49 199.9 116 81.0
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 3.2e-49 198.4 121 77.7
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 3.2e-49 198.4 116 81.9
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 4.2e-49 198.0 116 79.3
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.6e-48 196.1 113 83.2
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 3.6e-48 194.9 116 80.2
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.4e-47 193.0 116 77.6
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 1.8e-47 192.6 116 78.4
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.8e-47 192.6 116 76.7
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 3.0e-47 191.8 111 79.3
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 4.0e-47 191.4 116 78.4
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 1.2e-46 189.9 116 75.0
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 2.8e-45 185.3 116 76.7
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 4.8e-45 184.5 102 85.3
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 2.4e-44 182.2 116 74.1
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.1e-44 181.8 116 75.9
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 5.0e-42 174.5 135 65.9
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.9e-41 172.6 116 71.6
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 3.2e-41 171.8 105 77.1
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 2.1e-40 169.1 116 67.2
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 6.8e-39 164.1 118 64.4
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 3.4e-38 161.8 118 63.6
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 2.8e-37 158.7 95 78.9
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 3.7e-37 158.3 95 81.1
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.8e-36 156.0 123 64.2
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.9e-34 148.7 112 63.4
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.8e-27 124.0 120 57.5
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 5.8e-22 107.8 55 87.3
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 8.3e-21 104.0 56 80.4
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 3.2e-20 102.1 56 76.8
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.3e-13 80.1 43 95.3
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 3.6e-08 62.0 34 82.4
Prupe.6G248300 Prunus persica HOM05D006631 ORTHO05D334351 1.2e-06 57.0 44 68.2


User provided reference genes

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