Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025888 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.4e-124 448.0 229 100.0
CSS0031884 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.8e-101 372.9 233 86.3
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.0e-52 209.9 291 47.1
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.4e-47 192.6 330 39.4
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.5e-42 177.2 319 39.8
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.3e-38 164.1 240 45.8
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.4e-32 144.1 305 36.4
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.0e-32 142.5 287 36.9
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.5e-31 140.6 219 42.9
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 4.1e-29 132.5 208 43.8
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.6e-28 129.0 297 35.0
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.0e-27 126.3 187 41.7
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.5e-26 124.0 122 55.7
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 8.9e-16 88.2 233 28.3
MELO3C005509.2 Cucumis melo HOM05D024292 ORTHO05D010101 1.2e-15 87.8 189 31.7
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.6e-15 86.7 230 26.1
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 2.6e-15 86.7 166 33.7
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 2.6e-15 86.7 167 33.5
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 2.6e-15 86.7 231 28.1
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 1.7e-14 84.0 203 28.1
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 2.9e-14 83.2 167 31.1
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 8.4e-14 81.6 173 32.9
CsaV3_5G004510 Cucumis sativus L. HOM05D024292 ORTHO05D010101 3.2e-13 79.7 175 29.7
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 5.4e-13 79.0 136 35.3
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 9.3e-13 78.2 231 27.7
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 1.2e-12 77.8 164 34.1
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 1.2e-12 77.8 164 34.1
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 2.1e-12 77.0 172 30.8
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 3.5e-12 76.3 152 32.2
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 2.3e-11 73.6 170 28.2
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 3.9e-11 72.8 156 30.8
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 8.7e-11 71.6 174 28.7
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 1.1e-10 71.2 166 33.7
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 1.5e-10 70.9 226 25.2
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 1.9e-10 70.5 101 37.6
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 4.3e-10 69.3 166 31.3
QL04p029334 Quercus lobata HOM05D020596 ORTHO05D010101 4.3e-10 69.3 166 30.7
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 5.6e-10 68.9 118 33.1
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 5.6e-10 68.9 158 30.4
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 5.6e-10 68.9 157 32.5
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 7.3e-10 68.6 156 32.7
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 7.3e-10 68.6 166 30.1
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 6.2e-09 65.5 171 28.1
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 1.1e-08 64.7 103 33.0
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 2.4e-08 63.5 156 30.8
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 6.9e-08 62.0 225 26.7
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 9.0e-08 61.6 96 35.4
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 2.6e-07 60.1 175 28.6
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 2.9e-06 56.6 134 26.9


User provided reference genes

Program Settings