Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025869 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D009791 2.2e-94 349.0 176 100.0
CSS0024542 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D009791 1.1e-45 187.2 101 99.0
Actinidia29501 Actinidia chinensis HOM05D000085 ORTHO05D009791 1.3e-17 94.0 100 56.0
Actinidia03435 Actinidia chinensis HOM05D000085 ORTHO05D009791 1.6e-17 93.6 110 48.2
Lj4A685T34 Lonicera japonica HOM05D000085 ORTHO05D009791 4.8e-17 92.0 114 50.9
DCAR_031504 Daucus carota HOM05D000085 ORTHO05D009791 2.9e-14 82.8 106 49.1
FAN27G0973 Fragaria x ananassa HOM05D000085 ORTHO05D009791 2.9e-14 82.8 110 51.8
TAR628G0721 Trochodendron aralioides HOM05D000085 ORTHO05D009791 3.8e-14 82.4 104 51.0
Prupe.8G012500 Prunus persica HOM05D000085 ORTHO05D009791 8.4e-14 81.3 138 40.6
FvH4_2g15260 Fragaria vesca HOM05D000085 ORTHO05D009791 1.4e-13 80.5 108 50.9
FAN15G3404 Fragaria x ananassa HOM05D000085 ORTHO05D009791 1.4e-13 80.5 151 43.7
FAN24G2618 Fragaria x ananassa HOM05D000085 ORTHO05D009791 7.1e-13 78.2 108 50.0
Manes.18G084900 Manihot esculenta HOM05D000085 ORTHO05D009791 7.1e-13 78.2 102 49.0
MD05G1010000 Malus domestica HOM05D000085 ORTHO05D009791 2.7e-12 76.3 110 46.4
Prupe.8G012300 Prunus persica HOM05D008363 ORTHO05D009791 1.8e-11 73.6 104 46.2
TWI60G0672 Tripterygium wilfordii HOM05D000085 ORTHO05D009791 3.9e-11 72.4 104 47.1
SalBow6G4001 Salvia bowleyana HOM05D000085 ORTHO05D009791 5.1e-11 72.0 104 51.0
RcHm_v2.0_Chr6g0277981 Rosa chinensis HOM05D000085 ORTHO05D009791 1.5e-10 70.5 108 44.4
GSVIVG01009979001 Vitis vinifera HOM05D000085 ORTHO05D009791 1.5e-10 70.5 103 48.5
Cfa018397 Carpinus fangiana HOM05D000085 ORTHO05D009791 2.5e-10 69.7 117 38.5
Lj1g0014811 Lotus japonicus HOM05D000085 ORTHO05D009791 1.6e-09 67.0 110 38.2
Potri.005G185500 Populus trichocarpa HOM05D000085 ORTHO05D009791 2.1e-09 66.6 106 46.2
Ciclev10003429m.g Citrus clementina HOM05D000085 ORTHO05D009791 2.8e-09 66.2 116 44.0
Manes.02G172500 Manihot esculenta HOM05D000085 ORTHO05D009791 2.8e-09 66.2 99 46.5
Cc10_g13260 Coffea canephora HOM05D000085 ORTHO05D009791 3.7e-09 65.9 105 39.0
Thecc.08G138000 Theobroma cacao HOM05D000085 ORTHO05D009791 8.1e-09 64.7 111 42.3
Oeu045987.1 Olea europaea HOM05D000085 ORTHO05D009791 1.1e-08 64.3 110 43.6
Atru.chr13.1646 Acer truncatum HOM05D000085 ORTHO05D009791 2.0e-07 60.1 104 45.2
Glyma.06G120400 Glycine max HOM05D000085 ORTHO05D009791 3.4e-07 59.3 103 42.7
MD10G1008700 Malus domestica HOM05D000085 ORTHO05D009791 3.4e-07 59.3 110 38.2
Aqoxy6G00346 Aquilegia oxysepala HOM05D000485 ORTHO05D009791 1.3e-06 57.4 137 38.0
Cpa.g.sc26.71 Carica papaya HOM05D000085 ORTHO05D009791 1.3e-06 57.4 105 41.0
Nitab4.5_0003622g0040 Nicotiana tabacum HOM05D000085 ORTHO05D009791 2.2e-06 56.6 110 38.2
CAN.G46.6 Capsicum annuum HOM05D000085 ORTHO05D009791 6.4e-06 55.1 110 36.4
Haze_17673 Corylus avellana HOM05D000085 ORTHO05D009791 6.4e-06 55.1 92 38.0
Glyma.04G242900 Glycine max HOM05D000085 ORTHO05D009791 6.4e-06 55.1 103 39.8


User provided reference genes

Program Settings