Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025856 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D110646 4.8e-49 197.6 105 100.0
CSS0022375 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D109211 2.7e-44 181.8 106 93.4
CSS0036968 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D000879 4.2e-37 157.9 108 85.2
CSS0044659 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D000879 5.2e-27 124.4 107 72.9
CSS0005835 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D000879 1.6e-23 112.8 105 65.7
CSS0028682 Camellia sinensis var. sinensis HOM05D021829 ORTHO05D109265 1.6e-20 102.8 103 61.2
CSS0003257 Camellia sinensis var. sinensis HOM05D000291 ORTHO05D000879 5.9e-15 84.3 105 54.3
vmacro20816 Vaccinium macrocarpon HOM05D000291 ORTHO05D000879 1.0e-14 83.6 74 63.5
Actinidia01277 Actinidia chinensis HOM05D000291 ORTHO05D000879 1.5e-13 79.7 74 64.9
Dinv25439 Davidia involucrata HOM05D000291 ORTHO05D000879 9.5e-13 77.0 78 59.0
Sabra18G0116600 Salix brachista HOM05D000291 ORTHO05D000879 1.0e-11 73.6 67 64.2
Potri.018G142800 Populus trichocarpa HOM05D000291 ORTHO05D000879 2.3e-11 72.4 65 64.6
VMungo1215G0077 Vigna mungo HOM05D000291 ORTHO05D000879 6.8e-11 70.9 54 74.1
CiPaw.07G196800 Carya illinoinensis HOM05D000291 ORTHO05D000879 8.8e-11 70.5 75 58.7
Potri.006G075800 Populus trichocarpa HOM05D000291 ORTHO05D000879 1.2e-10 70.1 67 59.7
Phvul.003G141500 Phaseolus vulgaris HOM05D000291 ORTHO05D000879 1.5e-10 69.7 57 66.7
GSVIVG01010864001 Vitis vinifera HOM05D000291 ORTHO05D000879 1.5e-10 69.7 77 55.8
Cfa013450 Carpinus fangiana HOM05D000291 ORTHO05D000879 2.0e-10 69.3 79 58.2
Sabra06G0056500 Salix brachista HOM05D000291 ORTHO05D000879 2.0e-10 69.3 68 61.8
ClCG11G011780 Citrullus lanatus HOM05D000291 ORTHO05D000879 3.4e-10 68.6 76 59.2
Lj4g0023693 Lotus japonicus HOM05D000291 ORTHO05D000879 4.4e-10 68.2 48 77.1
Glyma.13G100400 Glycine max HOM05D000291 ORTHO05D000879 5.7e-10 67.8 72 56.9
Cpa.g.sc95.13 Carica papaya HOM05D000291 ORTHO05D000879 7.5e-10 67.4 58 67.2
Dinv41173 Davidia involucrata HOM05D000291 ORTHO05D000879 9.8e-10 67.0 77 51.9
Medtr2g037980 Medicago truncatula HOM05D000291 ORTHO05D000879 9.8e-10 67.0 49 73.5
Nitab4.5_0000007g0370 Nicotiana tabacum HOM05D000291 ORTHO05D000879 9.8e-10 67.0 78 52.6
CsaV3_2G008710 Cucumis sativus L. HOM05D000291 ORTHO05D000879 1.3e-09 66.6 80 53.8
Hma1.2p1_1326F.1_g275810 Hydrangea macrophylla HOM05D000291 ORTHO05D000879 1.3e-09 66.6 75 57.3
Haze_22017 Corylus avellana HOM05D000291 ORTHO05D000879 2.8e-09 65.5 75 58.7
PGSC0003DMG400009667 Solanum tuberosum HOM05D000291 ORTHO05D000879 2.8e-09 65.5 79 46.8
Ca_02104_v3 Cicer arietinum L. HOM05D000291 ORTHO05D000879 3.7e-09 65.1 41 82.9
Thecc.09G185800 Theobroma cacao HOM05D000291 ORTHO05D000879 6.3e-09 64.3 81 51.9
CSS0022651 Camellia sinensis var. sinensis HOM05D000291 ORTHO05D000879 1.1e-08 63.5 43 74.4
CSS0039170 Camellia sinensis var. sinensis HOM05D000291 ORTHO05D000879 1.1e-08 63.5 58 69.0
Solyc12g017430.3 Solanum lycopersicum HOM05D000291 ORTHO05D000879 1.4e-08 63.2 69 52.2
CAN.G67.5 Capsicum annuum HOM05D000291 ORTHO05D000879 1.8e-08 62.8 79 48.1
TAR383G0754 Trochodendron aralioides HOM05D000291 ORTHO05D000879 1.8e-08 62.8 77 51.9
Glyma.17G059500 Glycine max HOM05D000291 ORTHO05D000879 2.4e-08 62.4 47 74.5
Gohir.A05G002400 Gossypium hirsutum HOM05D000291 ORTHO05D000879 2.4e-08 62.4 74 51.4
Atru.chr7.758 Acer truncatum HOM05D000291 ORTHO05D000879 3.1e-08 62.0 78 51.3
Atru.chr7.780 Acer truncatum HOM05D000291 ORTHO05D000879 3.1e-08 62.0 78 51.3
Sc18g0004190 Simmondsia chinensis HOM05D000291 ORTHO05D000879 7.0e-08 60.8 76 47.4
Duzib168G0006 Durio zibethinus HOM05D000291 ORTHO05D000879 9.2e-08 60.5 83 49.4
Ca_21253_v3 Cicer arietinum L. HOM05D000291 ORTHO05D000879 1.6e-07 59.7 45 73.3
Gorai.009G002600 Gossypium raimondii HOM05D000291 ORTHO05D000879 1.6e-07 59.7 52 61.5
Lalb_Chr13g0300021 Lupinus albus HOM05D000291 ORTHO05D000879 2.0e-07 59.3 52 63.5
MD16G1249100 Malus domestica HOM05D000291 ORTHO05D000879 2.0e-07 59.3 45 71.1
Psat1g145640 Pisum sativum HOM05D000291 ORTHO05D000879 2.0e-07 59.3 46 67.4
MELO3C003976.2 Cucumis melo HOM05D000291 ORTHO05D000879 2.7e-07 58.9 74 51.4
Lalb_Chr11g0074781 Lupinus albus HOM05D000291 ORTHO05D000879 4.5e-07 58.2 50 66.0
Prupe.1G075800 Prunus persica HOM05D000291 ORTHO05D000879 4.5e-07 58.2 42 73.8
MSTRG.26543 Avicennia marina HOM05D000291 ORTHO05D000879 5.9e-07 57.8 81 46.9
Duzib150G0075 Durio zibethinus HOM05D000291 ORTHO05D000879 5.9e-07 57.8 71 52.1
COL.COLO4_07058 Corchorus olitorius HOM05D000291 ORTHO05D000879 7.7e-07 57.4 71 53.5
TPR.G5434 Trifolium pratense HOM05D000291 ORTHO05D000879 1.0e-06 57.0 84 46.4
Cc00_g20360 Coffea canephora HOM05D000291 ORTHO05D000879 1.3e-06 56.6 50 64.0
Glyma.15G165800 Glycine max HOM05D000291 ORTHO05D000879 1.3e-06 56.6 38 81.6
Hma1.2p1_0022F.1_g014490 Hydrangea macrophylla HOM05D000291 ORTHO05D000879 1.3e-06 56.6 78 48.7
Lj6g0024154 Lotus japonicus HOM05D000291 ORTHO05D000879 1.3e-06 56.6 39 76.9
Nitab4.5_0001995g0060 Nicotiana tabacum HOM05D000291 ORTHO05D000879 1.3e-06 56.6 57 56.1
Psat4g013400 Pisum sativum HOM05D000291 ORTHO05D000879 1.3e-06 56.6 42 69.0
Medtr4g127440 Medicago truncatula HOM05D000291 ORTHO05D000879 1.7e-06 56.2 42 69.0
QL02p046816 Quercus lobata HOM05D000291 ORTHO05D000879 1.7e-06 56.2 67 56.7
Peaxi162Scf00124g00044 Petunia axillaris HOM05D000291 ORTHO05D000879 2.3e-06 55.8 78 43.6
Eucgr.C02326 Eucalyptus grandis HOM05D000291 ORTHO05D000879 2.9e-06 55.5 35 80.0
Gohir.D05G003000 Gossypium hirsutum HOM05D000291 ORTHO05D000879 2.9e-06 55.5 51 58.8
Sc14g0001450 Simmondsia chinensis HOM05D000291 ORTHO05D000879 5.0e-06 54.7 75 49.3
Sed0015547 Sechium edule HOM05D000291 ORTHO05D000879 6.6e-06 54.3 73 50.7
TPR.G9000 Trifolium pratense HOM05D000291 ORTHO05D000879 6.6e-06 54.3 43 67.4
TWI63G0722 Tripterygium wilfordii HOM05D000291 ORTHO05D000879 6.6e-06 54.3 75 46.7
MSTRG.19374 Avicennia marina HOM05D000291 ORTHO05D000879 8.6e-06 53.9 73 46.6
Glyma.09G059500 Glycine max HOM05D000291 ORTHO05D000879 8.6e-06 53.9 42 71.4


User provided reference genes

Program Settings