Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 5.1e-77 291.2 169 100.0
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.5e-57 225.3 161 86.3
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 2.2e-51 206.1 110 89.1
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.4e-50 203.4 160 73.1
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 2.4e-50 202.6 110 88.2
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 4.1e-50 201.8 158 66.5
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.5e-49 198.4 157 65.6
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 5.9e-49 198.0 160 65.0
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 7.7e-49 197.6 162 66.0
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 1.0e-48 197.2 110 85.5
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 1.3e-48 196.8 110 80.9
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 2.2e-48 196.1 162 64.2
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 3.8e-48 195.3 160 64.4
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 5.0e-48 194.9 114 82.5
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.5e-47 193.4 110 82.7
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 2.5e-47 192.6 111 81.1
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 4.2e-47 191.8 110 83.6
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 5.5e-47 191.4 114 78.1
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 9.4e-47 190.7 111 80.2
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.2e-46 190.3 114 78.9
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 1.2e-46 190.3 111 82.9
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.6e-46 189.9 110 80.9
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 2.1e-46 189.5 110 78.2
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 2.1e-46 189.5 114 78.1
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 2.1e-46 189.5 158 63.3
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 2.7e-46 189.1 114 77.2
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.7e-46 189.1 114 78.9
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 3.6e-46 188.7 114 78.9
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.6e-46 188.7 157 60.5
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 4.7e-46 188.3 115 79.1
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 6.1e-46 188.0 160 63.1
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 8.0e-46 187.6 110 79.1
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 8.0e-46 187.6 114 76.3
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 8.0e-46 187.6 114 78.1
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 8.0e-46 187.6 157 59.9
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.0e-45 187.2 110 77.3
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 1.0e-45 187.2 110 79.1
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 1.0e-45 187.2 114 77.2
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 1.0e-45 187.2 114 77.2
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.4e-45 186.8 114 78.1
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 1.4e-45 186.8 110 80.0
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 1.8e-45 186.4 110 77.3
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 1.8e-45 186.4 110 77.3
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 2.3e-45 186.0 114 74.6
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 2.3e-45 186.0 110 79.1
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 2.3e-45 186.0 110 77.3
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 3.0e-45 185.7 168 58.3
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 3.0e-45 185.7 114 76.3
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 4.0e-45 185.3 114 78.1
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 1.5e-44 183.3 114 76.3
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 3.4e-44 182.2 162 58.6
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 4.4e-44 181.8 110 80.9
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 5.7e-44 181.4 162 59.3
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 5.7e-44 181.4 161 57.1
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.3e-43 180.3 160 58.8
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.7e-43 179.9 110 74.5
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.7e-43 179.9 160 59.4
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.7e-43 179.9 110 79.1
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.7e-43 179.9 110 78.2
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 2.2e-43 179.5 158 60.8
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 2.8e-43 179.1 110 77.3
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 2.8e-43 179.1 162 58.6
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 3.7e-43 178.7 110 79.1
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 3.7e-43 178.7 163 58.9
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 8.3e-43 177.6 114 71.9
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 8.3e-43 177.6 110 78.2
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.1e-42 177.2 114 73.7
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.4e-42 176.8 110 74.5
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.4e-42 176.8 110 73.6
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 1.8e-42 176.4 116 74.1
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.4e-42 176.0 158 59.5
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.4e-42 176.0 107 77.6
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 5.4e-42 174.9 111 73.0
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 7.0e-42 174.5 115 73.0
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 7.0e-42 174.5 114 70.2
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 9.1e-42 174.1 114 70.2
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 1.6e-41 173.3 111 73.0
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 1.6e-41 173.3 114 69.3
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.0e-41 172.9 110 74.5
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 2.0e-41 172.9 114 70.2
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 2.7e-41 172.6 146 61.6
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 2.7e-41 172.6 114 71.9
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 3.5e-41 172.2 115 72.2
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 7.7e-41 171.0 116 71.6
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 1.7e-40 169.9 114 70.2
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 2.3e-40 169.5 115 69.6
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 3.8e-40 168.7 158 59.5
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 6.6e-40 167.9 110 72.7
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 6.6e-40 167.9 111 70.3
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.1e-39 167.2 111 73.0
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.5e-39 166.8 123 66.7
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.5e-39 166.8 110 69.1
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 1.9e-39 166.4 114 69.3
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 2.5e-39 166.0 118 67.8
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.2e-38 163.7 109 72.5
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 2.1e-38 162.9 110 70.0
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 6.8e-37 157.9 86 83.7
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 1.5e-36 156.8 93 82.8
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 2.2e-35 152.9 192 45.8
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 6.3e-35 151.4 110 67.3
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 9.2e-34 147.5 86 79.1
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 3.5e-33 145.6 91 75.8
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 1.7e-32 143.3 93 75.3
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.7e-32 143.3 94 73.4
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.2e-30 137.1 86 76.7
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 1.2e-30 137.1 86 79.1
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 6.1e-30 134.8 119 53.8
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.0e-29 134.0 86 75.6
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.4e-29 133.7 84 73.8
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 4.9e-27 125.2 69 85.5
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 8.3e-27 124.4 90 67.8
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 7.0e-26 121.3 114 56.1
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 2.8e-22 109.4 70 75.7
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 6.4e-19 98.2 65 70.8


User provided reference genes

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