Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 5.5e-101 370.9 182 100.0
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 5.7e-58 228.0 174 68.4
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 1.7e-57 226.5 174 69.5
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 1.2e-55 220.3 165 69.7
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 4.7e-52 208.4 165 66.1
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 2.3e-51 206.1 165 66.1
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 4.0e-51 205.3 169 62.7
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 8.9e-51 204.1 172 64.0
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 1.5e-50 203.4 169 63.3
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 3.4e-50 202.2 174 61.5
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 4.4e-50 201.8 147 70.1
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 1.7e-49 199.9 174 61.5
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 1.7e-49 199.9 172 63.4
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 1.7e-49 199.9 169 62.1
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 2.2e-49 199.5 175 61.1
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 1.4e-48 196.8 177 59.9
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 5.4e-48 194.9 194 54.6
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 5.4e-48 194.9 176 59.1
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 7.0e-48 194.5 92 100.0
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 9.2e-48 194.1 178 58.4
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 1.6e-47 193.4 176 59.7
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 1.6e-47 193.4 176 60.8
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 2.0e-47 193.0 165 61.8
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 2.7e-47 192.6 177 59.9
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 6.0e-47 191.4 176 59.7
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.3e-46 190.3 177 59.3
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 1.7e-46 189.9 175 59.4
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 5.0e-46 188.3 176 58.0
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 6.6e-46 188.0 174 60.3
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 8.6e-46 187.6 175 60.0
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 8.6e-46 187.6 176 59.1
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 1.1e-45 187.2 126 73.8
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 1.5e-45 186.8 174 56.3
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 1.5e-45 186.8 178 59.0
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 1.9e-45 186.4 173 56.6
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 3.3e-45 185.7 175 57.1
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 5.6e-45 184.9 181 56.4
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 7.3e-45 184.5 176 59.1
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 1.2e-44 183.7 175 56.6
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.6e-44 183.3 177 57.6
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 1.1e-43 180.6 174 56.3
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 1.4e-43 180.3 137 65.0
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 2.3e-43 179.5 174 55.2
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 4.0e-43 178.7 175 56.0
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 4.0e-43 178.7 175 56.6
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 1.5e-42 176.8 163 58.3
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 1.5e-42 176.8 173 54.9
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 1.5e-42 176.8 176 55.7
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 2.0e-42 176.4 179 53.6
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 3.4e-42 175.6 164 57.3
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 7.5e-42 174.5 167 56.3
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 1.3e-41 173.7 174 52.3
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 3.7e-41 172.2 174 52.3
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 1.9e-40 169.9 108 75.9
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 3.2e-40 169.1 204 50.5
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 4.1e-40 168.7 124 64.5
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 4.1e-40 168.7 140 61.4
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 9.2e-40 167.5 171 52.6
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 1.2e-39 167.2 173 52.6
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 1.6e-39 166.8 179 52.5
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 3.5e-39 165.6 176 53.4
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 4.6e-39 165.2 139 63.3
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 7.8e-39 164.5 105 75.2
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 1.7e-38 163.3 171 50.9
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 1.7e-38 163.3 205 46.3
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 3.0e-38 162.5 171 53.8
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 3.0e-38 162.5 120 65.0
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 5.1e-38 161.8 161 54.7
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 5.1e-38 161.8 105 72.4
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 1.5e-37 160.2 125 61.6
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 3.3e-37 159.1 115 65.2
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 2.1e-36 156.4 134 60.4
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 4.7e-36 155.2 139 55.4
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 1.8e-35 153.3 115 63.5
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 1.8e-35 153.3 139 56.1
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 1.8e-35 153.3 108 65.7
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 4.0e-35 152.1 115 63.5
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 8.9e-35 151.0 129 61.2
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 1.5e-34 150.2 115 62.6
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 1.5e-34 150.2 157 54.1
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 2.0e-34 149.8 115 62.6
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 2.6e-34 149.4 107 67.3
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 3.4e-34 149.1 115 61.7
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 5.8e-34 148.3 111 62.2
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 9.9e-34 147.5 112 62.5
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 9.9e-34 147.5 149 53.0
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 1.3e-33 147.1 111 64.0
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 2.2e-33 146.4 139 54.0
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 2.2e-33 146.4 139 54.0
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 2.2e-33 146.4 139 54.0
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 3.2e-32 142.5 106 65.1
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 9.2e-32 141.0 105 63.8
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 1.7e-30 136.7 143 53.1
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 2.3e-30 136.3 106 60.4
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 8.6e-30 134.4 115 57.4
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 2.5e-29 132.9 128 56.2
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 5.6e-29 131.7 91 69.2
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 4.7e-28 128.6 108 62.0
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 1.2e-26 124.0 194 41.8
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 5.4e-24 115.2 126 46.0
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.1e-23 113.2 77 71.4
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 2.3e-22 109.8 79 65.8
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 1.5e-21 107.1 168 42.9
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.4e-19 100.5 103 56.3
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 4.0e-19 99.0 50 88.0
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 4.0e-19 99.0 159 40.3
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 1.7e-17 93.6 58 72.4
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.9e-16 90.1 111 44.1
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.9e-16 90.1 50 78.0
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 5.4e-16 88.6 82 58.5
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 9.3e-16 87.8 48 81.2
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 4.6e-15 85.5 111 40.5
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 2.3e-14 83.2 111 40.5
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 6.7e-14 81.6 112 40.2
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 4.5e-10 68.9 47 63.8
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 5.8e-10 68.6 109 40.4
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 1.2e-07 60.8 57 54.4
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 3.5e-07 59.3 90 36.7
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 1.0e-06 57.8 56 53.6
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 1.0e-06 57.8 56 53.6


User provided reference genes

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