Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 1.3e-176 622.9 294 100.0
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 1.1e-135 486.9 292 78.1
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 9.4e-127 457.2 292 74.0
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 3.6e-126 455.3 284 76.4
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 4.7e-126 454.9 282 77.3
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 3.7e-123 445.3 277 75.1
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 1.7e-120 436.4 295 69.8
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 6.5e-120 434.5 291 70.1
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 8.5e-120 434.1 284 71.8
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 3.2e-119 432.2 284 71.1
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 3.0e-117 425.6 282 71.3
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 3.4e-116 422.2 273 72.2
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 7.5e-116 421.0 299 67.9
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 2.2e-115 419.5 285 69.1
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 8.3e-115 417.5 309 65.4
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 1.1e-114 417.2 280 69.6
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 3.1e-114 415.6 286 69.9
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 4.1e-114 415.2 281 72.6
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 1.3e-112 410.2 288 67.7
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 6.5e-112 407.9 276 69.6
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.5e-111 406.8 291 67.0
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 1.5e-111 406.8 272 70.2
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 1.9e-111 406.4 278 70.5
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 4.7e-110 401.7 282 69.9
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 4.4e-108 395.2 276 67.4
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 9.8e-108 394.0 265 69.4
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 8.3e-107 391.0 300 63.3
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 1.4e-106 390.2 279 67.0
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 5.4e-106 388.3 259 70.3
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 1.2e-105 387.1 210 87.1
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 1.2e-105 387.1 350 58.3
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 2.7e-105 386.0 292 63.7
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 2.7e-105 386.0 310 65.2
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 1.0e-104 384.0 241 73.9
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 1.8e-101 373.2 279 66.7
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 9.8e-100 367.5 287 61.7
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 2.1e-94 349.7 239 71.1
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 4.7e-94 348.6 268 65.3
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 1.7e-88 330.1 277 59.2
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 5.0e-88 328.6 271 59.4
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 6.8e-85 318.2 228 68.0
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 8.9e-85 317.8 281 55.9
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 1.6e-81 307.0 246 62.6
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 1.1e-74 284.3 199 68.3
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 4.1e-74 282.3 201 68.7
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 8.9e-69 264.6 242 53.7
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 2.1e-65 253.4 229 57.2
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 7.3e-63 245.0 135 83.7
Actinidia01309 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.0e-56 224.6 117 87.2
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 2.4e-53 213.4 165 63.6
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 3.8e-51 206.1 145 69.7
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 4.2e-50 202.6 281 42.3
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 1.6e-38 164.1 113 68.1
Glyma.16G118000 Glycine max HOM05D008207 ORTHO05D010373 5.1e-32 142.5 92 72.8
MD16G1242000 Malus domestica HOM05D008207 ORTHO05D010373 1.9e-31 140.6 81 76.5
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 2.4e-29 133.7 95 66.3
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 2.3e-24 117.1 83 66.3
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 6.7e-24 115.5 72 70.8
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 3.3e-23 113.2 103 57.3
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 3.3e-23 113.2 118 48.3
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 9.7e-23 111.7 252 34.1
Glyma.02G093251 Glycine max HOM05D008207 ORTHO05D010373 6.3e-22 109.0 69 72.5
Haze_22075 Corylus avellana HOM05D008207 ORTHO05D010373 2.6e-20 103.6 56 76.8
Os02g0462300 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 7.2e-18 95.5 49 79.6
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 2.3e-16 90.5 61 70.5
SEGI_16784 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 2.8e-14 83.6 49 67.3


User provided reference genes

Program Settings