Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 8.3e-154 547.0 270 100.0
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 5.8e-107 391.3 253 75.5
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 9.6e-102 374.0 261 70.5
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 6.0e-96 354.8 262 69.8
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 4.2e-89 332.0 256 66.0
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 7.1e-89 331.3 253 66.8
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 1.2e-88 330.5 231 70.1
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 1.2e-88 330.5 256 65.6
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.3e-85 320.5 172 95.3
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 8.2e-85 317.8 216 74.5
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 1.8e-84 316.6 257 62.6
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 1.5e-83 313.5 253 62.8
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 3.4e-83 312.4 254 64.2
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.0e-82 310.8 264 61.0
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.7e-82 310.1 253 66.8
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 2.2e-82 309.7 252 63.1
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 2.5e-81 306.2 352 52.6
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 4.2e-81 305.4 258 62.8
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 4.6e-80 302.0 262 59.5
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 6.1e-80 301.6 263 59.7
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.0e-79 300.8 265 60.4
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 1.5e-78 297.0 258 60.5
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 5.7e-78 295.0 253 59.3
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 5.7e-78 295.0 259 59.8
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 2.8e-77 292.7 257 61.1
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.8e-76 290.0 254 56.7
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 3.1e-76 289.3 247 60.7
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 5.3e-76 288.5 214 68.7
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 5.3e-76 288.5 256 60.5
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.2e-75 287.3 254 58.3
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 2.0e-75 286.6 252 58.3
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.6e-75 286.2 254 64.6
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 7.7e-75 284.6 212 66.5
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.0e-74 284.3 258 60.1
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 3.8e-74 282.3 259 58.7
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 6.5e-74 281.6 263 58.2
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 1.1e-73 280.8 255 60.4
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.1e-73 280.8 224 64.7
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 1.4e-73 280.4 262 55.7
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 3.2e-73 279.3 258 56.6
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 4.7e-72 275.4 256 55.5
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.0e-71 272.7 263 58.2
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.0e-71 272.7 256 58.6
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 3.9e-71 272.3 260 56.9
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 5.1e-71 271.9 265 54.3
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 7.4e-70 268.1 265 56.6
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 9.7e-70 267.7 262 55.7
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.4e-68 263.8 194 69.6
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 3.1e-68 262.7 257 54.5
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 5.3e-68 261.9 170 74.1
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 7.0e-68 261.5 226 60.6
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 1.2e-67 260.8 286 51.7
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 3.5e-67 259.2 224 60.7
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 3.5e-67 259.2 271 50.9
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 4.5e-67 258.8 289 51.2
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 5.9e-67 258.5 215 66.5
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 7.7e-67 258.1 264 54.5
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 1.0e-66 257.7 261 54.4
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.3e-66 257.3 268 51.1
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 3.6e-64 249.2 261 51.0
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 4.7e-64 248.8 251 51.8
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 5.2e-63 245.4 186 65.6
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 1.1e-62 244.2 256 52.7
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 3.3e-62 242.7 226 56.2
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 7.4e-62 241.5 187 65.2
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 7.4e-62 241.5 187 65.2
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 7.4e-62 241.5 186 62.9
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 6.3e-61 238.4 181 66.9
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 8.2e-61 238.0 181 66.9
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 8.2e-61 238.0 226 57.5
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 2.4e-60 236.5 181 66.3
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 2.4e-60 236.5 194 61.9
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 2.4e-60 236.5 230 53.5
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 7.0e-60 235.0 262 50.4
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 1.2e-59 234.2 254 51.6
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 2.6e-59 233.0 172 65.7
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 3.5e-59 232.6 223 56.5
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 3.5e-59 232.6 181 63.0
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 4.5e-59 232.3 240 54.6
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 7.7e-59 231.5 148 73.0
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 5.0e-58 228.8 220 55.0
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 6.5e-58 228.4 173 65.3
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 1.1e-57 227.6 224 56.2
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 3.2e-57 226.1 219 55.7
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 4.0e-55 219.2 169 62.7
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 4.0e-55 219.2 209 56.0
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 2.2e-53 213.4 315 42.9
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 1.6e-51 207.2 215 51.6
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.0e-50 204.5 231 52.8
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 1.7e-50 203.8 282 45.0
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 1.1e-49 201.1 172 59.3
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 2.5e-49 199.9 125 73.6
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 6.8e-47 191.8 145 60.0
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 6.3e-45 185.3 262 44.3
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 5.0e-42 175.6 189 50.3
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 1.2e-40 171.0 123 65.0
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 6.1e-40 168.7 208 48.6
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 6.1e-40 168.7 208 48.6
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.0e-39 167.9 172 52.9
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 1.4e-39 167.5 171 50.9
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 5.2e-39 165.6 152 53.9
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 6.8e-39 165.2 105 71.4
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 3.2e-36 156.4 186 46.2
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 2.3e-34 150.2 110 66.4
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 8.0e-32 141.7 185 41.6
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 8.3e-29 131.7 87 69.0
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.1e-25 121.3 236 37.3
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 5.6e-25 119.0 87 63.2
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 1.8e-23 114.0 139 41.7
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 5.2e-23 112.5 87 60.9
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 2.4e-12 77.0 259 31.3
AagrBONN_evm.TU.Sc2ySwM_117.739 Anthoceros agrestis HOM05D000461 ORTHO05D009042 8.1e-08 62.0 111 34.2
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 4.0e-07 59.7 55 65.5
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 5.8e-06 55.8 39 64.1


User provided reference genes

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