Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 8.9e-201 703.4 347 100.0
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.0e-196 689.9 347 98.8
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 1.1e-22 111.7 248 38.7
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 4.5e-19 99.8 182 39.0
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 5.9e-19 99.4 160 43.1
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 1.3e-18 98.2 188 37.2
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 3.8e-18 96.7 159 42.1
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 6.5e-18 95.9 183 38.3
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 8.5e-18 95.5 183 37.7
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 1.1e-17 95.1 183 37.7
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 1.4e-17 94.7 158 40.5
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 1.4e-17 94.7 158 40.5
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 1.9e-17 94.4 177 38.4
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 1.9e-17 94.4 182 37.9
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 2.5e-17 94.0 160 40.6
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 2.5e-17 94.0 160 41.2
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 2.5e-17 94.0 195 35.4
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 3.2e-17 93.6 160 40.6
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 4.2e-17 93.2 233 33.9
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 4.2e-17 93.2 180 36.7
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 5.5e-17 92.8 51 92.2
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 5.5e-17 92.8 160 40.6
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 5.5e-17 92.8 183 36.6
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 7.2e-17 92.4 51 90.2
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 9.4e-17 92.0 181 37.6
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 1.6e-16 91.3 181 36.5
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.6e-16 91.3 181 36.5
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 1.6e-16 91.3 186 38.2
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.6e-16 91.3 183 38.3
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 1.6e-16 91.3 189 36.5
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 2.1e-16 90.9 179 36.9
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 2.1e-16 90.9 181 37.0
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 2.7e-16 90.5 188 37.2
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 2.7e-16 90.5 180 36.7
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 2.7e-16 90.5 179 36.3
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 4.7e-16 89.7 156 40.4
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 4.7e-16 89.7 160 39.4
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 4.7e-16 89.7 183 37.2
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 7.9e-16 89.0 158 38.6
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 7.9e-16 89.0 177 36.2
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 7.9e-16 89.0 188 35.6
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 7.9e-16 89.0 47 91.5
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 1.0e-15 88.6 49 87.8
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.0e-15 88.6 49 87.8
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 1.0e-15 88.6 183 36.1
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 1.4e-15 88.2 154 39.6
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 1.8e-15 87.8 47 91.5
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 1.8e-15 87.8 160 38.8
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 2.3e-15 87.4 49 85.7
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 2.3e-15 87.4 179 36.3
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 2.3e-15 87.4 179 36.3
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 2.3e-15 87.4 51 86.3
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 3.0e-15 87.0 51 82.4
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 3.0e-15 87.0 74 59.5
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 3.0e-15 87.0 51 82.4
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 3.0e-15 87.0 189 33.9
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 3.9e-15 86.7 195 34.9
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 3.9e-15 86.7 48 87.5
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 3.9e-15 86.7 156 38.5
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 3.9e-15 86.7 51 82.4
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 5.1e-15 86.3 87 51.7
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 5.1e-15 86.3 49 83.7
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 5.1e-15 86.3 179 35.8
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 5.1e-15 86.3 160 38.8
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 6.7e-15 85.9 156 37.8
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 8.8e-15 85.5 48 85.4
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 8.8e-15 85.5 155 38.7
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 8.8e-15 85.5 51 80.4
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 8.8e-15 85.5 51 80.4
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.1e-14 85.1 51 84.3
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.5e-14 84.7 51 80.4
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 1.5e-14 84.7 51 80.4
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 1.5e-14 84.7 51 80.4
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 1.5e-14 84.7 51 78.4
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.5e-14 84.7 51 78.4
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 2.0e-14 84.3 50 80.0
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 2.0e-14 84.3 157 37.6
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 3.3e-14 83.6 50 80.0
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 3.3e-14 83.6 160 37.5
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 4.4e-14 83.2 49 81.6
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 5.7e-14 82.8 51 80.4
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 5.7e-14 82.8 199 34.7
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 5.7e-14 82.8 45 84.4
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.3e-13 81.6 50 76.0
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 1.7e-13 81.3 156 36.5
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 3.7e-13 80.1 47 80.9
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 6.3e-13 79.3 45 80.0
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 6.3e-13 79.3 47 76.6
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 1.4e-12 78.2 45 82.2
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 1.2e-11 75.1 190 32.6
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.5e-11 74.7 46 76.1
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 3.5e-11 73.6 51 72.5
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 4.5e-11 73.2 46 71.7
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 3.8e-10 70.1 40 85.0
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 6.5e-10 69.3 46 69.6
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 1.1e-09 68.6 46 65.2
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 5.5e-09 66.2 42 78.6
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 2.7e-08 63.9 51 60.8
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 5.7e-06 56.2 44 63.6
SalBow3G3879 Salvia bowleyana HOM05D002854 ORTHO05D003051 7.5e-06 55.8 158 29.7
CiPaw.15G085000 Carya illinoinensis HOM05D002854 ORTHO05D003051 9.7e-06 55.5 86 38.4


User provided reference genes

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