Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025757 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 8.8e-72 273.5 134 100.0
CSS0030683 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 9.1e-45 183.7 95 96.8
Cpa.g.sc139.36 Carica papaya HOM05D004109 ORTHO05D005867 5.6e-42 174.5 95 89.5
Cfa002071 Carpinus fangiana HOM05D004109 ORTHO05D005867 5.6e-42 174.5 95 90.5
Cfa005415 Carpinus fangiana HOM05D004109 ORTHO05D005867 5.6e-42 174.5 95 90.5
Haze_01914 Corylus avellana HOM05D004109 ORTHO05D005867 5.6e-42 174.5 95 90.5
Ciclev10015058m.g Citrus clementina HOM05D004109 ORTHO05D005867 7.2e-42 174.1 95 89.5
RcHm_v2.0_Chr7g0241131 Rosa chinensis HOM05D004109 ORTHO05D005867 7.2e-42 174.1 136 66.9
CiPaw.09G142500 Carya illinoinensis HOM05D004109 ORTHO05D005867 1.6e-41 172.9 95 88.4
QL08p023474 Quercus lobata HOM05D004109 ORTHO05D005867 1.6e-41 172.9 94 89.4
FvH4_3g10270 Fragaria vesca HOM05D004109 ORTHO05D005867 2.1e-41 172.6 136 66.2
Prupe.4G091700 Prunus persica HOM05D004109 ORTHO05D005867 2.1e-41 172.6 95 88.4
FAN25G1737 Fragaria x ananassa HOM05D001785 ORTHO05D001933 3.6e-41 171.8 131 67.2
MD10G1251700 Malus domestica HOM05D004109 ORTHO05D005867 4.7e-41 171.4 90 91.1
Atru.chr12.891 Acer truncatum HOM05D004109 ORTHO05D005867 6.1e-41 171.0 95 87.4
Potri.011G163400 Populus trichocarpa HOM05D004109 ORTHO05D005867 6.1e-41 171.0 95 89.5
FAN21G0038 Fragaria x ananassa HOM05D001785 ORTHO05D001933 8.0e-41 170.6 131 67.2
Hma1.2p1_0892F.1_g233350 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 8.0e-41 170.6 95 89.5
MD05G1271100 Malus domestica HOM05D004109 ORTHO05D005867 8.0e-41 170.6 90 91.1
Potri.001G465300 Populus trichocarpa HOM05D004109 ORTHO05D005867 1.0e-40 170.2 95 88.4
RcHm_v2.0_Chr5g0016531 Rosa chinensis HOM05D004109 ORTHO05D005867 1.0e-40 170.2 110 78.2
GSVIVG01001692001 Vitis vinifera HOM05D004109 ORTHO05D005867 1.0e-40 170.2 95 87.4
Migut.B01142 Erythranthe guttata HOM05D004109 ORTHO05D005867 1.4e-40 169.9 95 86.3
arahy.Tifrunner.gnm1.ann1.E4EMQ7 Arachis hypogaea HOM05D004109 ORTHO05D005867 1.8e-40 169.5 92 89.1
Phvul.006G126900 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 1.8e-40 169.5 92 88.0
TWI63G1440 Tripterygium wilfordii HOM05D004109 ORTHO05D005867 1.8e-40 169.5 136 65.4
Gohir.A13G125500 Gossypium hirsutum HOM05D004109 ORTHO05D005867 2.3e-40 169.1 95 87.4
Gohir.D13G129300 Gossypium hirsutum HOM05D004109 ORTHO05D005867 2.3e-40 169.1 95 87.4
Sabra16G0315800 Salix brachista HOM05D004109 ORTHO05D005867 2.3e-40 169.1 94 87.2
Cc02_g32120 Coffea canephora HOM05D004109 ORTHO05D005867 3.0e-40 168.7 95 87.4
FAN11G0285 Fragaria x ananassa HOM05D001785 ORTHO05D001933 4.0e-40 168.3 131 66.4
FAN16G0137 Fragaria x ananassa HOM05D001785 ORTHO05D001933 4.0e-40 168.3 105 80.0
Glyma.15G131700 Glycine max HOM05D004109 ORTHO05D005867 4.0e-40 168.3 92 88.0
CAN.G411.27 Capsicum annuum HOM05D004109 ORTHO05D005867 5.2e-40 167.9 141 63.8
MSTRG.20474 Avicennia marina HOM05D004109 ORTHO05D005867 6.8e-40 167.5 95 85.3
CANSAT01G0468 Cannabis sativa HOM05D004109 ORTHO05D005867 6.8e-40 167.5 91 89.0
VMungo0540G0358 Vigna mungo HOM05D004109 ORTHO05D005867 6.8e-40 167.5 92 87.0
Lj4g0018356 Lotus japonicus HOM05D004109 ORTHO05D005867 8.9e-40 167.2 91 87.9
Medtr2g030520 Medicago truncatula HOM05D004109 ORTHO05D005867 8.9e-40 167.2 92 88.0
Nitab4.5_0001778g0190 Nicotiana tabacum HOM05D004109 ORTHO05D005867 8.9e-40 167.2 110 76.4
Ca_00854_v3 Cicer arietinum L. HOM05D004109 ORTHO05D005867 1.2e-39 166.8 92 88.0
COL.COLO4_13719 Corchorus olitorius HOM05D004109 ORTHO05D005867 1.2e-39 166.8 95 85.3
Duzib160G0240 Durio zibethinus HOM05D004109 ORTHO05D005867 1.2e-39 166.8 95 85.3
Glyma.09G025600 Glycine max HOM05D004109 ORTHO05D005867 1.2e-39 166.8 92 88.0
Gorai.013G145300 Gossypium raimondii HOM05D004109 ORTHO05D005867 1.2e-39 166.8 91 89.0
Manes.06G058300 Manihot esculenta HOM05D004109 ORTHO05D005867 1.2e-39 166.8 88 93.2
Nitab4.5_0003703g0080 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.2e-39 166.8 132 63.6
TPR.G39866 Trifolium pratense HOM05D004109 ORTHO05D005867 1.2e-39 166.8 92 88.0
arahy.Tifrunner.gnm1.ann1.X3TBAN Arachis hypogaea HOM05D004109 ORTHO05D005867 1.5e-39 166.4 88 92.0
Nitab4.5_0001793g0060 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.5e-39 166.4 110 74.5
THA.LOC104799477 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 1.5e-39 166.4 91 86.8
DCAR_003019 Daucus carota HOM05D004109 ORTHO05D005867 2.0e-39 166.0 95 85.3
Migut.B01141 Erythranthe guttata HOM05D004109 ORTHO05D005867 2.0e-39 166.0 93 86.0
Lj7A233T12 Lonicera japonica HOM05D004109 ORTHO05D005867 2.0e-39 166.0 87 92.0
THA.LOC104810828 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 2.0e-39 166.0 91 89.0
CsaV3_1G037190 Cucumis sativus L. HOM05D004109 ORTHO05D005867 2.6e-39 165.6 95 85.3
Lalb_Chr20g0120131 Lupinus albus HOM05D004109 ORTHO05D005867 2.6e-39 165.6 92 87.0
Psat1g166680 Pisum sativum HOM05D004109 ORTHO05D005867 2.6e-39 165.6 92 87.0
Sabra11G0141200 Salix brachista HOM05D004109 ORTHO05D005867 2.6e-39 165.6 91 89.0
Thecc.10G182100 Theobroma cacao HOM05D004109 ORTHO05D005867 2.6e-39 165.6 95 85.3
ClCG03G008220 Citrullus lanatus HOM05D004109 ORTHO05D005867 3.4e-39 165.2 95 86.3
Solyc02g071890.3 Solanum lycopersicum HOM05D004109 ORTHO05D005867 4.4e-39 164.9 95 84.2
Sopen02g020880 Solanum pennellii HOM05D004109 ORTHO05D005867 4.4e-39 164.9 95 84.2
A09p08450 Brassica napus HOM05D004109 ORTHO05D005867 7.5e-39 164.1 136 62.5
BraA09t36495Z Brassica rapa HOM05D004109 ORTHO05D005867 7.5e-39 164.1 136 62.5
MELO3C002828.2 Cucumis melo HOM05D004109 ORTHO05D005867 7.5e-39 164.1 95 85.3
Phvul.002G198300 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 7.5e-39 164.1 91 86.8
Rhsim07G0074000 Rhododendron simsii HOM05D004109 ORTHO05D005867 7.5e-39 164.1 92 84.8
Sed0019466 Sechium edule HOM05D004109 ORTHO05D005867 7.5e-39 164.1 95 84.2
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 9.8e-39 163.7 88 89.8
arahy.Tifrunner.gnm1.ann1.S2DTMZ Arachis hypogaea HOM05D004109 ORTHO05D005867 9.8e-39 163.7 88 89.8
AUR62000071 Chenopodium quinoa HOM05D004109 ORTHO05D005867 9.8e-39 163.7 95 84.2
Nn7g37134 Nelumbo nucifera HOM05D004109 ORTHO05D005867 9.8e-39 163.7 88 89.8
BcaC04g23349 Brassica carinata HOM05D004109 ORTHO05D005867 1.3e-38 163.3 136 62.5
BolC9t53868H Brassica oleracea HOM05D004109 ORTHO05D005867 1.3e-38 163.3 136 62.5
Peaxi162Scf00112g01722 Petunia axillaris HOM05D004109 ORTHO05D005867 1.3e-38 163.3 135 64.4
Sed0002561 Sechium edule HOM05D004109 ORTHO05D005867 1.3e-38 163.3 95 84.2
EL10Ac1g00099 Beta vulgaris HOM05D004109 ORTHO05D005867 1.7e-38 162.9 95 84.2
BcaNung04636 Brassica carinata HOM05D004109 ORTHO05D005867 1.7e-38 162.9 136 62.5
Eucgr.D00111 Eucalyptus grandis HOM05D004109 ORTHO05D005867 1.7e-38 162.9 93 84.9
Thhalv10004035m.g Eutrema salsugineum HOM05D004109 ORTHO05D005867 1.7e-38 162.9 92 83.7
Lj6g0008240 Lotus japonicus HOM05D004109 ORTHO05D005867 1.7e-38 162.9 89 87.6
Ah.05g178270 Amaranthus hybridus HOM05D004109 ORTHO05D005867 2.2e-38 162.5 95 84.2
Carub.0008s2466 Capsella rubella HOM05D004109 ORTHO05D005867 2.2e-38 162.5 92 83.7
Duzib192G0069 Durio zibethinus HOM05D004109 ORTHO05D005867 2.2e-38 162.5 95 83.2
Glyma.08G081500 Glycine max HOM05D004109 ORTHO05D005867 2.2e-38 162.5 106 75.5
CARHR277790 Cardamine hirsuta HOM05D004109 ORTHO05D005867 2.9e-38 162.2 92 83.7
Lsat_1_v5_gn_2_116541 Lactuca sativa HOM05D004109 ORTHO05D005867 2.9e-38 162.2 130 63.1
TAR369G0339 Trochodendron aralioides HOM05D004109 ORTHO05D005867 2.9e-38 162.2 88 88.6
AL8G41120 Arabidopsis lyrata HOM05D004109 ORTHO05D005867 3.7e-38 161.8 92 82.6
ECA238G2995 Erigeron canadensis HOM05D004109 ORTHO05D005867 3.7e-38 161.8 90 84.4
Hund27096 Selenicereus undatus HOM05D004109 ORTHO05D005867 3.7e-38 161.8 95 84.2
VMungo0251G3018 Vigna mungo HOM05D004109 ORTHO05D005867 4.9e-38 161.4 89 87.6
Aa31LG1G12300 Aethionema arabicum HOM05D004109 ORTHO05D005867 6.4e-38 161.0 133 61.7
ATR0810G187 Amborella trichopoda HOM05D004109 ORTHO05D005867 6.4e-38 161.0 87 89.7
C01p45280 Brassica napus HOM05D004109 ORTHO05D005867 6.4e-38 161.0 93 83.9
BcaC01g02640 Brassica carinata HOM05D004109 ORTHO05D005867 8.3e-38 160.6 130 63.1
A06p30510 Brassica napus HOM05D004109 ORTHO05D005867 8.3e-38 160.6 130 63.1
C03p62550 Brassica napus HOM05D004109 ORTHO05D005867 8.3e-38 160.6 130 63.1
C09p09570 Brassica napus HOM05D004109 ORTHO05D005867 8.3e-38 160.6 136 61.8
BolC3t18512H Brassica oleracea HOM05D004109 ORTHO05D005867 8.3e-38 160.6 130 63.1
BraA06t26000Z Brassica rapa HOM05D004109 ORTHO05D005867 8.3e-38 160.6 130 63.1
HanXRQChr07g0201181 Helianthus annuus HOM05D004109 ORTHO05D005867 8.3e-38 160.6 89 85.4
MBI02_g14218_MAGBIO Magnolia biondii HOM05D004109 ORTHO05D005867 1.1e-37 160.2 90 85.6
Sp2g26950 Schrenkiella parvula HOM05D004109 ORTHO05D005867 1.1e-37 160.2 129 64.3
SGA_v2.0_scaffold114G32023 Striga asiatica HOM05D004109 ORTHO05D005867 1.1e-37 160.2 88 86.4
AT5G63890 Arabidopsis thaliana HOM05D004109 ORTHO05D005867 1.4e-37 159.8 91 82.4
BolC8t51924H Brassica oleracea HOM05D004109 ORTHO05D005867 1.4e-37 159.8 89 85.4
Sc26g0000620 Simmondsia chinensis HOM05D004109 ORTHO05D005867 1.8e-37 159.5 95 82.1
PGR083G1643 Punica granatum HOM05D004109 ORTHO05D005867 2.4e-37 159.1 89 86.5
BcaB02g09768 Brassica carinata HOM05D004109 ORTHO05D005867 3.2e-37 158.7 89 84.3
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 3.2e-37 158.7 86 89.5
unitig_0.g2208 Utricularia gibba HOM05D004109 ORTHO05D005867 4.1e-37 158.3 87 85.1
BcaC01g02810 Brassica carinata HOM05D004109 ORTHO05D005867 1.2e-36 156.8 93 81.7
C03p60030 Brassica napus HOM05D004109 ORTHO05D005867 1.2e-36 156.8 93 81.7
Pp3c25_2460 Physcomitrium patens HOM05D004109 ORTHO05D005867 1.2e-36 156.8 93 79.6
PGSC0003DMG400028409 Solanum tuberosum HOM05D004109 ORTHO05D005867 2.0e-36 156.0 87 85.1
Aqoxy7G00406 Aquilegia oxysepala HOM05D004109 ORTHO05D005867 2.7e-36 155.6 88 85.2
Os01g0232700 Oryza sativa ssp. japonica HOM05D004109 ORTHO05D005867 2.7e-36 155.6 128 62.5
HPP92_000958 Vanilla planifolia HOM05D004109 ORTHO05D005867 5.9e-36 154.5 87 83.9
SEGI_09299 Sequoiadendron giganteum HOM05D004109 ORTHO05D005867 7.8e-36 154.1 86 84.9
BolC3t15408H Brassica oleracea HOM05D004109 ORTHO05D005867 1.3e-35 153.3 93 80.6
PSO675G4088 Papaver somniferum HOM05D004109 ORTHO05D005867 2.3e-35 152.5 88 83.0
CDE06G2252 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 3.9e-35 151.8 86 81.4
Mapoly0060s0093 Marchantia polymorpha HOM05D004109 ORTHO05D005867 5.0e-35 151.4 89 80.9
Pp3c16_4820 Physcomitrium patens HOM05D004109 ORTHO05D005867 5.0e-35 151.4 87 82.8
PSO675G5109 Papaver somniferum HOM05D004109 ORTHO05D005867 6.6e-35 151.0 88 81.8
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 8.6e-35 150.6 81 90.1
CSS0037475 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 8.6e-35 150.6 81 88.9
CDE03G0162 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 8.6e-35 150.6 86 81.4
AagrBONN_evm.TU.Sc2ySwM_228.1565 Anthoceros agrestis HOM05D004109 ORTHO05D005867 1.1e-34 150.2 87 82.8
SMO137G0061 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 4.3e-34 148.3 82 87.8
Nitab4.5_0008572g0030 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.6e-33 146.4 93 76.3
CBR_g8928 Chara braunii HOM05D004109 ORTHO05D005867 6.2e-33 144.4 85 82.4
vmacro23219 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 6.2e-33 144.4 104 70.2
Cre02.g077350 Chlamydomonas reinhardtii HOM05D004109 ORTHO05D005867 8.9e-32 140.6 82 82.9
MCO06G190 Micromonas commoda HOM05D004109 ORTHO05D005867 3.4e-31 138.7 82 81.7
PRCOL_00002586 Prasinoderma coloniale HOM05D004109 ORTHO05D005867 9.8e-31 137.1 82 76.8
vmacro13807 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 4.9e-30 134.8 95 69.5
Cfa023091 Carpinus fangiana HOM05D004109 ORTHO05D005867 5.8e-23 111.3 92 55.4
Hma1.2p1_0258F.1_g104030 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 1.9e-18 96.3 64 79.7
BcaC09g48845 Brassica carinata HOM05D004109 ORTHO05D009034 1.4e-16 90.1 88 56.8
BcaNung04631 Brassica carinata HOM05D004109 ORTHO05D005867 8.9e-16 87.4 136 42.6
Lsat_1_v5_gn_0_43980 Lactuca sativa HOM05D004109 ORTHO05D005867 1.2e-15 87.0 86 47.7
Lsat_1_v5_gn_0_46200 Lactuca sativa HOM05D004109 ORTHO05D005867 2.2e-14 82.8 86 45.3
Haze_27135 Corylus avellana HOM05D004109 ORTHO05D005867 1.1e-13 80.5 85 48.2
BolC3t18268H Brassica oleracea HOM05D004109 ORTHO05D005867 3.5e-12 75.5 51 76.5
SMO170G0053 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 2.1e-09 66.2 30 93.3


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