Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025735 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D006399 3.1e-19 97.8 63 100.0
Cc01_g14710 Coffea canephora HOM05D000417 ORTHO05D000342 2.4e-11 71.6 43 88.4
Gohir.A03G026200 Gossypium hirsutum HOM05D002034 ORTHO05D006399 1.5e-10 68.9 40 90.0
SGA_v2.0_scaffold104G30143 Striga asiatica HOM05D002034 ORTHO05D006399 5.9e-10 67.0 42 83.3
Duzib170G0382 Durio zibethinus HOM05D002034 ORTHO05D006399 3.8e-09 64.3 40 85.0
CiPaw.14G055200 Carya illinoinensis HOM05D002034 ORTHO05D006399 3.2e-08 61.2 40 87.5
PGSC0003DMG400030374 Solanum tuberosum HOM05D002034 ORTHO05D006399 5.5e-08 60.5 39 84.6
Manes.18G141005 Manihot esculenta HOM05D002034 ORTHO05D006399 7.2e-08 60.1 40 85.0
Nitab4.5_0004155g0010 Nicotiana tabacum HOM05D002034 ORTHO05D006399 9.4e-08 59.7 39 84.6
Lj2A1091G43 Lonicera japonica HOM05D002034 ORTHO05D006399 1.2e-07 59.3 43 76.7
Glyma.11G165000 Glycine max HOM05D002034 ORTHO05D006399 1.6e-07 58.9 40 82.5
unitig_26.g10217 Utricularia gibba HOM05D002034 ORTHO05D006399 1.6e-07 58.9 39 79.5
HPP92_003242 Vanilla planifolia HOM05D002034 ORTHO05D006399 1.6e-07 58.9 42 76.2
Oeu064670.1 Olea europaea HOM05D002034 ORTHO05D006399 2.7e-07 58.2 31 87.1
Phvul.006G072900 Phaseolus vulgaris HOM05D002034 ORTHO05D006399 4.6e-07 57.4 40 80.0
Potri.001G281300 Populus trichocarpa HOM05D002034 ORTHO05D006399 4.6e-07 57.4 40 80.0
Potri.009G076600 Populus trichocarpa HOM05D002034 ORTHO05D006399 6.1e-07 57.0 40 82.5
Cfa011758 Carpinus fangiana HOM05D002034 ORTHO05D006399 7.9e-07 56.6 40 82.5
Haze_24395 Corylus avellana HOM05D002034 ORTHO05D006399 7.9e-07 56.6 40 82.5
Hma1.2p1_0146F.1_g065460 Hydrangea macrophylla HOM05D002034 ORTHO05D006399 7.9e-07 56.6 29 93.1
VMungo0647G1676 Vigna mungo HOM05D002034 ORTHO05D006399 7.9e-07 56.6 41 80.5
Actinidia34475 Actinidia chinensis HOM05D002034 ORTHO05D006399 1.0e-06 56.2 43 69.8
Nitab4.5_0000967g0020 Nicotiana tabacum HOM05D002034 ORTHO05D006399 1.4e-06 55.8 43 76.7
Dinv28685 Davidia involucrata HOM05D002034 ORTHO05D006399 3.0e-06 54.7 27 92.6
Glyma.18G058200 Glycine max HOM05D002034 ORTHO05D006399 3.9e-06 54.3 41 80.5
TAR623G0025 Trochodendron aralioides HOM05D002034 ORTHO05D006399 3.9e-06 54.3 44 70.5
Prupe.6G050700 Prunus persica HOM05D002034 ORTHO05D006399 5.1e-06 53.9 40 77.5
A02p07680 Brassica napus HOM05D002034 ORTHO05D006399 6.7e-06 53.5 42 78.6
BraA02t05843Z Brassica rapa HOM05D002034 ORTHO05D006399 6.7e-06 53.5 42 78.6
Ca_05091_v3 Cicer arietinum L. HOM05D002034 ORTHO05D006399 8.8e-06 53.1 41 75.6
Ca_14994_v3 Cicer arietinum L. HOM05D002034 ORTHO05D006399 8.8e-06 53.1 41 75.6
Sabra16G0175000 Salix brachista HOM05D002034 ORTHO05D006399 8.8e-06 53.1 39 76.9


User provided reference genes

Program Settings