Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025712 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.6e-111 404.4 226 100.0
CSS0027719 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.8e-51 205.7 191 72.3
CSS0005428 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.2e-41 174.1 182 69.2
CSS0050093 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.1e-41 171.8 195 64.1
CSS0038075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.0e-11 72.4 49 69.4
CSS0009426 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.9e-10 70.5 49 67.3
CSS0044845 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.2e-10 68.6 49 63.3
CSS0010680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.6e-09 67.4 49 65.3
CSS0040342 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.6e-09 67.4 49 65.3
CANSAT25G1047 Cannabis sativa HOM05D000034 ORTHO05D000037 1.0e-08 64.7 42 71.4
CANSAT25G2314 Cannabis sativa HOM05D000034 ORTHO05D000037 1.0e-08 64.7 42 71.4
CANSAT54G1197 Cannabis sativa HOM05D000034 ORTHO05D000037 1.0e-08 64.7 42 71.4
CANSAT54G2552 Cannabis sativa HOM05D000034 ORTHO05D000037 1.0e-08 64.7 42 71.4
TAR331G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.0e-08 64.7 100 40.0
CSS0039380 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-08 64.3 49 63.3
Lj3g0012091 Lotus japonicus HOM05D000034 ORTHO05D000037 1.8e-08 63.9 105 39.0
RcHm_v2.0_Chr1g0354781 Rosa chinensis HOM05D000034 ORTHO05D000037 1.8e-08 63.9 42 69.0
LjContig00141g0023111 Lotus japonicus HOM05D000034 ORTHO05D000037 3.0e-08 63.2 42 71.4
PSO063G6922 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 63.2 42 69.0
PSO170G2012 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 63.2 42 69.0
PSO210G4967 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 63.2 42 69.0
PSO210G6866 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 63.2 42 69.0
PSO386G0107 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 63.2 42 69.0
PSO675G0791 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 63.2 42 69.0
PSO700G0240 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 63.2 42 69.0
CANSAT01G0970 Cannabis sativa HOM05D000034 ORTHO05D000037 4.0e-08 62.8 42 69.0
CANSAT80G2513 Cannabis sativa HOM05D000034 ORTHO05D000037 4.0e-08 62.8 40 72.5
AUR62037954 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.2e-08 62.4 44 68.2
CANSAT01G2546 Cannabis sativa HOM05D000034 ORTHO05D000037 6.8e-08 62.0 42 69.0
CANSAT11G1962 Cannabis sativa HOM05D000034 ORTHO05D000037 6.8e-08 62.0 43 65.1
CANSAT25G1613 Cannabis sativa HOM05D000034 ORTHO05D000037 6.8e-08 62.0 42 69.0
TWI73G1290 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.8e-08 62.0 64 50.0
Lj3g0012180 Lotus japonicus HOM05D000034 ORTHO05D000037 8.8e-08 61.6 105 39.0
PSO724G0660 Papaver somniferum HOM05D000034 ORTHO05D000037 8.8e-08 61.6 42 66.7
TWI38G1947 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.2e-07 61.2 47 59.6
Aqoxy4G01435 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.5e-07 60.8 56 58.9
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.5e-07 60.8 56 58.9
arahy.Tifrunner.gnm1.ann1.MPB7DX Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-07 60.8 38 73.7
CANSAT21G1727 Cannabis sativa HOM05D000034 ORTHO05D000037 1.5e-07 60.8 42 69.0
MBI19_g00241_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.5e-07 60.8 42 64.3
arahy.Tifrunner.gnm1.ann1.8AJD73 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.6e-07 60.1 61 54.1
TWI60G0194 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.6e-07 60.1 47 57.4
PSO017G6287 Papaver somniferum HOM05D000034 ORTHO05D000037 3.4e-07 59.7 42 66.7
arahy.Tifrunner.gnm1.ann1.650AVT Arachis hypogaea HOM05D000034 ORTHO05D000037 4.4e-07 59.3 38 71.1
arahy.Tifrunner.gnm1.ann1.FCT25S Arachis hypogaea HOM05D000034 ORTHO05D000037 4.4e-07 59.3 38 71.1
CANSAT64G2284 Cannabis sativa HOM05D000034 ORTHO05D000037 4.4e-07 59.3 40 70.0
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 4.4e-07 59.3 55 52.7
TWI09G0723 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.4e-07 59.3 47 57.4
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 5.7e-07 58.9 55 52.7
MBI08_g00970_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 5.7e-07 58.9 44 63.6
MBI14_g17384_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 5.7e-07 58.9 44 63.6
SHI14674 Sapria himalayana HOM05D000034 ORTHO05D000037 5.7e-07 58.9 43 53.5
HanXRQChr12g0382961 Helianthus annuus HOM05D000034 ORTHO05D000037 7.5e-07 58.5 88 42.0
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 7.5e-07 58.5 39 71.8
Aqoxy5G02543 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.8e-07 58.2 40 62.5
Aqoxy6G02146 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.8e-07 58.2 92 40.2
Aqoxy7G02254 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.8e-07 58.2 40 62.5
CANSAT01G1210 Cannabis sativa HOM05D000034 ORTHO05D000037 9.8e-07 58.2 42 66.7
Oeu015491.1 Olea europaea HOM05D000034 ORTHO05D000037 9.8e-07 58.2 61 49.2
SHI13850 Sapria himalayana HOM05D000034 ORTHO05D000037 9.8e-07 58.2 42 57.1
TWI73G1226 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.8e-07 58.2 47 57.4
TWI74G1293 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.8e-07 58.2 47 57.4
Atru.chr5.2512 Acer truncatum HOM05D000034 ORTHO05D000037 1.3e-06 57.8 42 64.3
arahy.Tifrunner.gnm1.ann1.RU9D2T Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 30 83.3
CSS0001522 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 57.8 40 65.0
CSS0002925 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 57.8 40 65.0
CSS0009060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 57.8 40 65.0
CSS0010359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 57.8 40 65.0
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 57.8 40 65.0
HanXRQChr07g0185941 Helianthus annuus HOM05D000034 ORTHO05D000037 1.3e-06 57.8 55 54.5
Lj1g0002194 Lotus japonicus HOM05D000034 ORTHO05D000037 1.3e-06 57.8 40 65.0
MBI10_g03022_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.3e-06 57.8 44 63.6
Os10g0460733 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 1.3e-06 57.8 42 64.3
arahy.Tifrunner.gnm1.ann1.F8S6LB Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 38 68.4
MELO3C034964.2 Cucumis melo HOM05D000034 ORTHO05D000037 1.7e-06 57.4 38 68.4
MBI08_g29137_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.7e-06 57.4 42 57.1
QL01p050021 Quercus lobata HOM05D000034 ORTHO05D000037 1.7e-06 57.4 47 61.7
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 1.7e-06 57.4 34 73.5
Rhsim04G0111300 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.7e-06 57.4 73 42.5
Rhsim04G0145700 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.7e-06 57.4 73 42.5
Rhsim05G0210200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.7e-06 57.4 73 42.5
Aqoxy1G02789 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.2e-06 57.0 47 53.2
arahy.Tifrunner.gnm1.ann1.B6EI28 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 57.0 38 68.4
arahy.Tifrunner.gnm1.ann1.EQ53E4 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 57.0 30 83.3
arahy.Tifrunner.gnm1.ann1.ES6UTP Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 57.0 30 83.3
arahy.Tifrunner.gnm1.ann1.H0SGIW Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 57.0 30 83.3
arahy.Tifrunner.gnm1.ann1.HQ0KDL Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 57.0 30 83.3
arahy.Tifrunner.gnm1.ann1.S3JL1H Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 57.0 30 83.3
arahy.Tifrunner.gnm1.ann1.UA7YVD Arachis hypogaea HOM05D000034 ORTHO05D002688 2.2e-06 57.0 30 83.3
CANSAT54G1366 Cannabis sativa HOM05D000034 ORTHO05D000285 2.2e-06 57.0 70 44.3
Hma1.2p1_0358F.1_g134740 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.2e-06 57.0 42 61.9
MBI12_g12393_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.2e-06 57.0 42 59.5
MBI17_g21965_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.2e-06 57.0 42 59.5
PSO017G3336 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-06 57.0 40 62.5
PSO541G4587 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-06 57.0 40 62.5
PSO832G2050 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-06 57.0 42 64.3
PGR119G0632 Punica granatum HOM05D000034 ORTHO05D000037 2.2e-06 57.0 64 50.0
SHI20335 Sapria himalayana HOM05D000034 ORTHO05D000037 2.2e-06 57.0 45 57.8
SHI27191 Sapria himalayana HOM05D000034 ORTHO05D000037 2.2e-06 57.0 42 54.8
TWI75G1793 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.2e-06 57.0 70 44.3
TWI75G1861 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.2e-06 57.0 70 44.3
TWI81G0533 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.2e-06 57.0 70 44.3
CANSAT80G1286 Cannabis sativa HOM05D000034 ORTHO05D000037 2.8e-06 56.6 40 67.5
MBI17_g01576_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.8e-06 56.6 42 64.3
Os10g0126100 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 2.8e-06 56.6 42 64.3
TWI23G0349 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.8e-06 56.6 44 59.1
TWI31G0756 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.8e-06 56.6 70 44.3
Atru.chr4.1236 Acer truncatum HOM05D000034 ORTHO05D000037 3.7e-06 56.2 42 61.9
arahy.Tifrunner.gnm1.ann1.48C0A1 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.7e-06 56.2 35 71.4
arahy.Tifrunner.gnm1.ann1.NHZ1NU Arachis hypogaea HOM05D000034 ORTHO05D000037 3.7e-06 56.2 38 68.4
CSS0041691 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.7e-06 56.2 40 62.5
CANSAT64G1448 Cannabis sativa HOM05D000034 ORTHO05D000037 3.7e-06 56.2 42 64.3
Duzib187G1082 Durio zibethinus HOM05D000034 ORTHO05D000037 3.7e-06 56.2 35 74.3
MBI14_g15656_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.7e-06 56.2 44 61.4
Prupe.1G096200 Prunus persica HOM05D000034 ORTHO05D000037 3.7e-06 56.2 134 30.6
arahy.Tifrunner.gnm1.ann1.V5K3GS Arachis hypogaea HOM05D000034 ORTHO05D000037 4.9e-06 55.8 35 71.4
CSS0015900 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.9e-06 55.8 40 62.5
ECA232G0123 Erigeron canadensis HOM05D000034 ORTHO05D000037 4.9e-06 55.8 55 52.7
MBI07_g05325_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 4.9e-06 55.8 42 57.1
Oeu011781.1 Olea europaea HOM05D000034 ORTHO05D000037 4.9e-06 55.8 42 61.9
Oeu017244.1 Olea europaea HOM05D000034 ORTHO05D000037 4.9e-06 55.8 42 61.9
Oeu059220.1 Olea europaea HOM05D000034 ORTHO05D000037 4.9e-06 55.8 72 45.8
Oeu063760.1 Olea europaea HOM05D000034 ORTHO05D000037 4.9e-06 55.8 61 47.5
Os04g0471100 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 4.9e-06 55.8 42 61.9
PSO782G2923 Papaver somniferum HOM05D000034 ORTHO05D000037 4.9e-06 55.8 40 62.5
Rhsim01G0138000 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.9e-06 55.8 73 42.5
Rhsim11G0185300 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.9e-06 55.8 40 65.0
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.9e-06 55.8 40 65.0
RhsimUnG0061200 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.9e-06 55.8 73 42.5
TWI14G0766 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.9e-06 55.8 70 44.3
TWI39G0489 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.9e-06 55.8 47 53.2
TWI39G1305 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.9e-06 55.8 70 44.3
Atru.chr10.353 Acer truncatum HOM05D000034 ORTHO05D000037 6.3e-06 55.5 37 70.3
Aqoxy2G01242 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.3e-06 55.5 38 63.2
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.3e-06 55.5 38 63.2
Aqoxy6G01842 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.3e-06 55.5 42 61.9
arahy.Tifrunner.gnm1.ann1.55DRF4 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.3e-06 55.5 38 68.4
arahy.Tifrunner.gnm1.ann1.DIK1RJ Arachis hypogaea HOM05D000034 ORTHO05D000037 6.3e-06 55.5 30 80.0
arahy.Tifrunner.gnm1.ann1.H7NW57 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.3e-06 55.5 30 80.0
CSS0041293 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.3e-06 55.5 40 62.5
CANSAT78G0128 Cannabis sativa HOM05D000034 ORTHO05D000037 6.3e-06 55.5 42 64.3
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 6.3e-06 55.5 58 51.7
HanXRQChr12g0361021 Helianthus annuus HOM05D000034 ORTHO05D000037 6.3e-06 55.5 55 52.7
HanXRQChr16g0506241 Helianthus annuus HOM05D000034 ORTHO05D000037 6.3e-06 55.5 59 47.5
Hma1.2p1_0000F.1_g000130 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.3e-06 55.5 42 59.5
Hma1.2p1_0006F.1_g004960 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.3e-06 55.5 42 59.5
Hma1.2p1_0071F.1_g037930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.3e-06 55.5 42 59.5
Hma1.2p1_1250F.1_g270290 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.3e-06 55.5 42 59.5
MBI01_g42393_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.3e-06 55.5 42 59.5
MBI16_g14986_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.3e-06 55.5 35 74.3
MBI19_g26579_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 6.3e-06 55.5 42 59.5
PSO732G0102 Papaver somniferum HOM05D000034 ORTHO05D000037 6.3e-06 55.5 40 62.5
TWI12G0430 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.3e-06 55.5 47 55.3
Hma1.2p1_0529F.1_g173210 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.3e-06 55.1 42 59.5
Hma1.2p1_0616F.1_g189950 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.3e-06 55.1 42 59.5
Hma1.2p1_1201F.1_g266550 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.3e-06 55.1 42 59.5
MBI18_g01503_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 44 61.4
MBI18_g26297_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 41 63.4
Os06g0595433 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 8.3e-06 55.1 42 59.5
TWI23G0160 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 43 58.1
TWI34G0916 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 43 58.1
TWI34G1702 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 43 58.1
TWI38G0294 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 43 58.1
TWI38G2340 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 43 58.1
TWI53G0605 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 43 58.1
TWI60G0087 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 43 58.1
TWI75G1126 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.3e-06 55.1 43 58.1


User provided reference genes

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