Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 0.0e+00 1166.4 595 100.0
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 3.4e-269 931.4 613 78.6
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 5.5e-267 924.1 614 76.5
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 9.4e-267 923.3 614 76.5
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 2.1e-250 869.0 614 72.6
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 2.1e-218 762.7 619 65.3
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 1.4e-209 733.4 613 62.0
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 3.4e-208 728.8 613 60.4
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 5.8e-208 728.0 616 60.7
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 8.3e-207 724.2 626 61.5
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 3.2e-206 722.2 615 61.8
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 3.5e-205 718.8 649 58.4
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 3.9e-204 715.3 624 62.0
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 6.6e-204 714.5 634 61.8
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 2.2e-199 699.5 620 58.9
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 1.1e-198 697.2 616 59.6
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 6.0e-197 691.4 526 64.8
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 3.3e-195 685.6 620 57.9
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 2.8e-194 682.6 626 58.9
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 3.6e-194 682.2 614 58.0
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 2.4e-193 679.5 615 59.2
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 5.3e-193 678.3 620 57.6
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 1.5e-192 676.8 619 60.6
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 2.0e-192 676.4 647 56.6
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 2.0e-192 676.4 619 57.8
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.4e-190 670.2 589 60.1
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.6e-189 666.8 620 57.4
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 3.5e-189 665.6 611 58.8
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 6.2e-186 654.8 615 57.7
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 1.8e-185 653.3 621 56.7
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 5.3e-185 651.7 607 57.8
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 9.0e-185 651.0 620 57.3
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 2.6e-184 649.4 622 57.4
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 2.6e-184 649.4 616 57.5
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 3.4e-184 649.0 595 58.2
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 2.2e-183 646.4 624 56.6
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.2e-183 646.4 620 56.3
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 4.9e-183 645.2 578 59.2
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 2.4e-182 642.9 619 55.7
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 2.1e-181 639.8 643 55.1
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 6.0e-181 638.3 623 56.0
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.0e-180 637.5 637 55.1
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 1.4e-177 627.1 594 56.6
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 2.6e-176 622.9 609 56.5
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 3.4e-176 622.5 594 55.7
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 4.9e-175 618.6 628 53.8
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 5.5e-174 615.1 618 57.4
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.6e-173 613.6 570 56.5
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 4.6e-173 612.1 628 54.1
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 4.6e-173 612.1 618 54.5
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 6.0e-173 611.7 621 54.8
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 5.1e-172 608.6 634 52.4
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 6.7e-172 608.2 549 57.9
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 8.7e-172 607.8 516 62.0
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 1.9e-171 606.7 612 53.6
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 1.6e-170 603.6 595 55.5
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 1.6e-170 603.6 627 53.3
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 1.6e-170 603.6 614 53.9
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 2.8e-170 602.8 622 56.1
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 3.7e-170 602.4 598 55.4
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 8.2e-170 601.3 546 57.5
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.8e-169 600.1 518 60.2
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 3.4e-168 595.9 550 57.1
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 7.6e-168 594.7 558 56.1
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 1.0e-167 594.3 549 57.0
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 1.3e-167 594.0 601 53.9
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.3e-167 594.0 621 53.6
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 2.2e-167 593.2 635 52.6
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 2.5e-166 589.7 675 51.3
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 2.7e-165 586.3 600 53.7
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 7.9e-165 584.7 575 54.4
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 1.0e-164 584.3 537 56.6
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 3.9e-164 582.4 570 55.3
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 9.7e-163 577.8 619 52.8
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 6.3e-162 575.1 618 52.6
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 6.3e-162 575.1 656 49.5
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 1.0e-159 567.8 616 52.1
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 8.5e-159 564.7 618 51.9
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 7.2e-158 561.6 605 54.2
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 2.3e-156 556.6 578 53.6
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 1.8e-153 547.0 577 53.7
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 1.2e-152 544.3 630 49.5
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 2.6e-152 543.1 617 49.8
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 5.9e-152 542.0 608 51.6
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 7.7e-152 541.6 578 53.1
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 1.7e-151 540.4 639 47.7
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 8.5e-151 538.1 432 62.5
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 1.2e-149 534.3 515 54.8
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 6.1e-149 531.9 643 48.2
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 6.7e-148 528.5 494 56.3
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 5.0e-143 512.3 573 51.7
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 6.5e-143 511.9 591 49.9
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 1.0e-135 488.0 561 50.1
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.8e-129 467.2 643 44.6
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 2.4e-129 466.8 598 45.7
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 2.6e-123 446.8 485 49.3
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 2.2e-122 443.7 395 54.7
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 4.9e-98 362.8 538 40.1
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 4.1e-97 359.8 453 47.7
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 1.4e-84 318.2 497 37.4
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 3.2e-81 307.0 462 37.9
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 4.3e-78 296.6 293 58.0
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 9.0e-76 288.9 632 34.5
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 1.1e-73 282.0 192 74.0
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.3e-63 247.7 209 60.3
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 4.2e-57 226.9 317 39.4
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 1.5e-38 165.2 563 27.0
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 1.2e-27 129.0 128 52.3
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 3.5e-27 127.5 369 30.6
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 5.0e-26 123.6 420 27.6
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 2.0e-22 111.7 565 23.9
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.5e-19 100.5 106 54.7
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.5e-19 100.5 106 54.7
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 2.2e-18 98.2 68 67.6
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.8e-18 97.4 104 54.8
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.8e-18 97.4 104 54.8
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.5e-17 95.5 203 36.5
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 4.0e-15 87.4 113 41.6
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 2.2e-10 71.6 79 55.7


User provided reference genes

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