Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 2.1e-100 369.0 184 100.0
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 7.7e-26 121.3 161 49.7
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.9e-24 116.7 162 47.5
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 3.0e-22 109.4 136 51.5
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.2e-20 103.2 178 41.6
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 2.8e-20 102.8 147 47.6
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.8e-19 100.1 158 42.4
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 5.3e-19 98.6 165 42.4
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 9.1e-19 97.8 119 50.4
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.5e-18 97.1 161 43.5
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 1.3e-17 94.0 153 43.8
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 1.7e-17 93.6 136 45.6
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 1.7e-17 93.6 185 36.8
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 2.9e-17 92.8 154 40.3
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 5.0e-17 92.0 165 40.6
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 5.0e-17 92.0 172 40.1
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 8.5e-17 91.3 128 46.1
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.4e-16 90.5 152 39.5
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 1.4e-16 90.5 158 41.8
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.5e-16 89.7 169 39.6
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 3.2e-16 89.4 162 38.9
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 4.2e-16 89.0 122 45.9
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 9.4e-16 87.8 144 37.5
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 9.4e-16 87.8 172 38.4
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 1.2e-15 87.4 152 42.1
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.2e-15 87.4 159 39.6
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.2e-15 87.4 159 39.6
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 1.6e-15 87.0 149 41.6
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 2.1e-15 86.7 125 41.6
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 2.1e-15 86.7 131 42.0
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 2.7e-15 86.3 140 40.7
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 2.7e-15 86.3 132 40.9
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 3.6e-15 85.9 146 39.7
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.6e-15 85.9 160 38.1
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 3.6e-15 85.9 159 39.6
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 3.6e-15 85.9 132 39.4
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 3.6e-15 85.9 132 39.4
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 4.7e-15 85.5 140 40.7
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 4.7e-15 85.5 159 39.0
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 6.1e-15 85.1 159 35.8
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 6.1e-15 85.1 151 38.4
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 6.1e-15 85.1 164 39.6
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 1.0e-14 84.3 126 41.3
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.0e-14 84.3 159 39.6
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 1.4e-14 84.0 130 42.3
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.4e-14 84.0 159 37.7
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.4e-14 84.0 159 37.7
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 1.4e-14 84.0 143 41.3
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.4e-14 84.0 160 40.0
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 3.9e-14 82.4 159 37.7
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 3.9e-14 82.4 160 38.1
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 5.1e-14 82.0 158 37.3
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 5.1e-14 82.0 167 37.1
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 5.1e-14 82.0 172 35.5
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 6.7e-14 81.6 159 39.0
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 6.7e-14 81.6 159 37.1
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 6.7e-14 81.6 169 39.6
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 6.7e-14 81.6 132 37.9
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 8.8e-14 81.3 156 36.5
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 1.5e-13 80.5 142 39.4
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 2.0e-13 80.1 177 35.0
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.0e-13 80.1 128 42.2
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.6e-13 79.7 128 42.2
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 2.6e-13 79.7 158 38.0
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 3.3e-13 79.3 139 41.0
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 3.3e-13 79.3 136 40.4
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 4.4e-13 79.0 153 37.9
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 5.7e-13 78.6 131 38.2
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 9.7e-13 77.8 161 37.3
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 9.7e-13 77.8 166 36.1
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 9.7e-13 77.8 130 39.2
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 1.7e-12 77.0 153 37.9
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 2.2e-12 76.6 154 37.0
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 2.8e-12 76.3 187 34.2
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 3.7e-12 75.9 160 36.2
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 8.2e-12 74.7 100 46.0
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 2.4e-11 73.2 126 40.5
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 3.1e-11 72.8 164 34.8
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 3.1e-11 72.8 149 42.3
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 7.0e-11 71.6 130 38.5
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 1.2e-10 70.9 130 36.9
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 2.6e-10 69.7 131 39.7
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 4.5e-10 68.9 132 38.6
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 7.7e-10 68.2 127 36.2
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 7.7e-10 68.2 137 32.8
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.3e-09 67.4 93 46.2
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 5.0e-09 65.5 164 34.1
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 5.0e-09 65.5 127 35.4
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 6.5e-09 65.1 146 34.9
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 1.5e-08 63.9 146 35.6
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 2.5e-08 63.2 129 34.1
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 4.2e-08 62.4 142 38.0
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 5.5e-08 62.0 130 35.4
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 6.1e-07 58.5 130 33.1
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 6.1e-07 58.5 163 28.8
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 6.1e-07 58.5 111 37.8
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 8.0e-07 58.2 122 38.5
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 1.4e-06 57.4 143 31.5
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 1.4e-06 57.4 109 36.7
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 2.3e-06 56.6 60 51.7
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 4.0e-06 55.8 143 30.8
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 5.2e-06 55.5 130 31.5
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 8.8e-06 54.7 150 29.3


User provided reference genes

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