Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025625 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D000004 1.0e-72 276.6 132 100.0
CSS0033585 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D000004 8.5e-27 124.0 116 56.0
CSS0010759 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-20 102.1 95 53.7
CSS0020053 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-19 99.0 95 52.6
CSS0016554 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.0e-19 98.2 95 54.7
CSS0028435 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.2e-18 94.4 95 50.5
CSS0011681 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-17 92.0 128 42.2
CSS0030187 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-17 92.0 92 50.0
CSS0004052 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.6e-15 85.9 95 49.5
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-15 85.5 93 47.3
CSS0026644 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.3e-14 81.3 81 58.0
CSS0025174 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.4e-13 79.3 58 65.5
CSS0044276 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.3e-13 78.2 83 49.4
CSS0006009 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.0e-13 77.8 123 39.8
CSS0000625 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-10 70.5 82 50.0
CSS0041535 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-10 70.5 91 45.1
CSS0005186 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D043286 1.5e-10 70.1 88 46.6
CSS0008242 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-10 70.1 78 47.4
TAR549G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000004 3.2e-10 68.9 95 42.1
CSS0008224 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D043286 4.2e-10 68.6 88 45.5
QL01p048324 Quercus lobata HOM05D002615 ORTHO05D002913 4.2e-10 68.6 95 41.1
CSS0030642 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.4e-10 67.4 82 48.8
CSS0027194 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.6e-09 66.6 93 43.0
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-09 66.2 114 35.1
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 2.1e-09 66.2 114 34.2
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-09 66.2 114 35.1
PGSC0003DMG400015955 Solanum tuberosum HOM05D000003 ORTHO05D000006 2.1e-09 66.2 95 37.9
CSS0031199 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-09 65.9 74 47.3
CSS0035318 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.7e-09 65.9 123 34.1
CiPaw.06G025000 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.6e-09 65.5 125 32.8
CSS0020651 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-09 65.1 90 47.8
QL11p030734 Quercus lobata HOM05D000969 ORTHO05D000899 4.7e-09 65.1 114 34.2
CSS0026440 Camellia sinensis var. sinensis HOM05D010577 ORTHO05D012830 6.1e-09 64.7 82 45.1
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 1.8e-08 63.2 95 35.8
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 1.8e-08 63.2 95 35.8
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 2.3e-08 62.8 95 35.8
CSS0023967 Camellia sinensis var. sinensis HOM05D010577 ORTHO05D012830 3.0e-08 62.4 67 53.7
CSS0027234 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.0e-08 62.4 86 43.0
QL04p042086 Quercus lobata HOM05D000003 ORTHO05D000006 3.0e-08 62.4 95 35.8
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 3.0e-08 62.4 95 35.8
Aqoxy3G01815 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.2e-08 61.6 96 34.4
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 6.7e-08 61.2 95 37.9
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 1.2e-07 60.5 95 34.7
TAR493G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.2e-07 60.5 95 33.7
Aqoxy1G02903 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.0e-07 59.7 90 38.9
PSO384G1525 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-07 59.7 98 31.6
QL05p026285 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-07 59.7 95 36.8
QL04p090352 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-07 59.3 94 35.1
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 2.6e-07 59.3 95 34.7
Aqoxy5G02498 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.3e-07 58.9 87 39.1
Sopen11g019660 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-07 58.9 95 34.7
Atru.chr2.258 Acer truncatum HOM05D000003 ORTHO05D000004 4.4e-07 58.5 96 40.6
CSS0030423 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.4e-07 58.5 77 44.2
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 4.4e-07 58.5 95 32.6
PSO675G4067 Papaver somniferum HOM05D000003 ORTHO05D000006 5.7e-07 58.2 94 38.3
QL06p003549 Quercus lobata HOM05D004938 ORTHO05D006035 5.7e-07 58.2 95 37.9
QL08p022680 Quercus lobata HOM05D000458 ORTHO05D004796 5.7e-07 58.2 95 37.9
PGSC0003DMG400032795 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 95 37.9
Aqoxy3G00652 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.2e-06 56.2 92 37.0
PGSC0003DMG400033900 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.2e-06 56.2 95 32.6
Aqoxy7G01789 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.8e-06 55.8 93 36.6
PSO513G0078 Papaver somniferum HOM05D000003 ORTHO05D000006 2.8e-06 55.8 94 37.2
CSS0028707 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.7e-06 55.5 101 37.6
TAR640G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 4.8e-06 55.1 82 39.0
QL03p009188 Quercus lobata HOM05D000003 ORTHO05D000006 6.3e-06 54.7 95 31.6
Atru.chr3.1819 Acer truncatum HOM05D000003 ORTHO05D000004 8.2e-06 54.3 96 34.4
Aqoxy1G01793 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 8.2e-06 54.3 92 34.8


User provided reference genes

Program Settings