Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 9.3e-71 270.0 129 100.0
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.3e-68 261.5 129 96.9
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.0e-65 252.3 129 96.1
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.9e-53 211.5 130 84.6
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.0e-48 196.8 129 81.4
CSS0036547 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.2e-43 179.1 129 72.9
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.0e-40 167.9 88 92.0
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 1.2e-36 156.8 88 84.1
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 1.5e-36 156.4 85 85.9
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 1.5e-36 156.4 85 85.9
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 9.8e-36 153.7 84 84.5
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 4.8e-35 151.4 89 78.7
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 1.8e-34 149.4 89 79.8
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 2.4e-34 149.1 88 79.5
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 2.4e-34 149.1 88 80.7
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 2.4e-34 149.1 87 81.6
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 3.1e-34 148.7 88 78.4
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 4.1e-34 148.3 88 80.7
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 5.4e-34 147.9 88 77.3
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 5.4e-34 147.9 90 76.7
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 5.4e-34 147.9 87 80.5
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 9.1e-34 147.1 88 78.4
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 3.5e-33 145.2 89 77.5
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 1.0e-32 143.7 83 78.3
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 1.3e-32 143.3 86 77.9
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 1.7e-32 142.9 82 81.7
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 1.7e-32 142.9 84 78.6
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 1.7e-32 142.9 83 79.5
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 1.7e-32 142.9 83 78.3
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 2.3e-32 142.5 84 77.4
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 2.3e-32 142.5 83 77.1
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 2.9e-32 142.1 82 80.5
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 3.8e-32 141.7 82 79.3
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 5.0e-32 141.4 80 82.5
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 5.0e-32 141.4 83 77.1
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 5.0e-32 141.4 83 77.1
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 2.5e-31 139.0 84 77.4
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 2.5e-31 139.0 80 80.0
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 2.5e-31 139.0 80 81.2
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 3.2e-31 138.7 80 77.5
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 3.2e-31 138.7 82 79.3
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 4.2e-31 138.3 88 75.0
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 1.2e-30 136.7 80 80.0
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 1.6e-30 136.3 87 73.6
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 1.6e-30 136.3 86 74.4
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 2.1e-30 136.0 82 76.8
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 3.6e-30 135.2 80 80.0
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 8.0e-30 134.0 79 77.2
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 1.0e-29 133.7 79 75.9
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 1.4e-29 133.3 80 76.2
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 1.4e-29 133.3 87 72.4
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 1.8e-29 132.9 88 72.7
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.8e-29 132.9 88 72.7
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 1.8e-29 132.9 90 68.9
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 2.3e-29 132.5 88 70.5
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 2.3e-29 132.5 80 73.8
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 3.0e-29 132.1 97 68.0
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 3.0e-29 132.1 86 74.4
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 3.0e-29 132.1 79 75.9
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 4.0e-29 131.7 81 74.1
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 8.8e-29 130.6 86 74.4
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 8.8e-29 130.6 80 71.2
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 2.0e-28 129.4 81 72.8
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 2.6e-28 129.0 77 77.9
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 2.6e-28 129.0 88 69.3
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 3.4e-28 128.6 80 75.0
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 4.4e-28 128.3 93 67.7
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 5.7e-28 127.9 87 67.8
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 5.7e-28 127.9 92 67.4
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 7.5e-28 127.5 87 66.7
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.3e-27 126.7 81 70.4
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 2.2e-27 125.9 87 65.5
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 2.2e-27 125.9 87 65.5
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 2.8e-27 125.6 81 70.4
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 2.8e-27 125.6 80 71.2
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 3.7e-27 125.2 80 71.2
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 3.7e-27 125.2 89 67.4
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 1.1e-26 123.6 80 71.2
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 1.1e-26 123.6 83 68.7
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.1e-26 123.6 82 69.5
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 1.8e-26 122.9 80 70.0
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 1.8e-26 122.9 81 69.1
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 2.4e-26 122.5 87 64.4
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 2.4e-26 122.5 71 77.5
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 3.1e-26 122.1 87 64.4
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 3.1e-26 122.1 87 64.4
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 3.1e-26 122.1 87 64.4
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 3.1e-26 122.1 97 64.9
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 1.6e-25 119.8 97 63.9
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 5.9e-25 117.9 83 65.1
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 1.3e-24 116.7 97 56.7
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 2.9e-24 115.5 99 58.6
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 3.8e-24 115.2 80 66.2
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 8.6e-24 114.0 83 65.1
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 1.1e-23 113.6 60 85.0
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 5.6e-23 111.3 80 67.5
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 7.3e-23 110.9 80 62.5
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 7.3e-23 110.9 80 62.5
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 7.3e-23 110.9 80 62.5
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 9.5e-23 110.5 82 64.6
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 1.8e-21 106.3 70 80.0
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 1.8e-21 106.3 70 80.0
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 4.0e-21 105.1 93 50.5
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 8.9e-21 104.0 69 68.1
MELO3C008912.2 Cucumis melo HOM05D004656 ORTHO05D005404 3.4e-20 102.1 55 83.6
Zm00001eb125490 Zea mays HOM05D004656 ORTHO05D005404 9.8e-20 100.5 83 55.4
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 1.3e-19 100.1 109 50.5
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 3.7e-19 98.6 79 62.0
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 4.9e-19 98.2 82 57.3
Zm00001eb384090 Zea mays HOM05D004656 ORTHO05D005404 1.6e-17 93.2 82 53.7
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.0e-16 90.5 55 74.5
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.9e-15 86.3 55 70.9
Eucgr.E03560 Eucalyptus grandis HOM05D004656 ORTHO05D005404 5.6e-15 84.7 55 69.1
Eucgr.C00011 Eucalyptus grandis HOM05D004656 ORTHO05D005404 7.3e-15 84.3 55 69.1
Eucgr.L00388 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.1e-13 80.5 60 63.3
Eucgr.E03557 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.8e-13 79.7 61 59.0
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 1.5e-12 76.6 87 43.7
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 1.5e-12 76.6 100 41.0
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 1.9e-10 69.7 93 40.9
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 2.4e-10 69.3 80 43.8
CSS0022791 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 7.8e-09 64.3 71 52.1
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 1.0e-08 63.9 82 42.7


User provided reference genes

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