Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025594 Camellia sinensis var. sinensis HOM05D001035 ORTHO05D001045 5.3e-98 360.9 169 100.0
CSS0040615 Camellia sinensis var. sinensis HOM05D001035 ORTHO05D001045 2.6e-28 129.4 63 95.2
Cfa012766 Carpinus fangiana HOM05D001035 ORTHO05D001045 1.2e-20 104.0 85 57.6
CiPaw.08G002100 Carya illinoinensis HOM05D001035 ORTHO05D001045 3.4e-20 102.4 63 74.6
Dinv41743 Davidia involucrata HOM05D001035 ORTHO05D001045 4.4e-20 102.1 63 71.4
Actinidia35139 Actinidia chinensis HOM05D001035 ORTHO05D001045 9.8e-20 100.9 65 76.9
Haze_21290 Corylus avellana HOM05D001035 ORTHO05D001045 6.4e-19 98.2 63 68.3
Rhsim11G0054800 Rhododendron simsii HOM05D001035 ORTHO05D001045 1.1e-18 97.4 64 73.4
Actinidia18883 Actinidia chinensis HOM05D001035 ORTHO05D001045 1.9e-18 96.7 64 75.0
RcHm_v2.0_Chr7g0228111 Rosa chinensis HOM05D001035 ORTHO05D001045 1.3e-16 90.5 62 66.1
FvH4_5g32060 Fragaria vesca HOM05D001035 ORTHO05D001045 3.0e-16 89.4 63 63.5
FAN08G1353 Fragaria x ananassa HOM05D001035 ORTHO05D001045 3.0e-16 89.4 63 63.5
FAN18G0239 Fragaria x ananassa HOM05D001035 ORTHO05D001045 3.0e-16 89.4 63 63.5
MD15G1408200 Malus domestica HOM05D001035 ORTHO05D001045 3.0e-16 89.4 63 63.5
FAN13G2816 Fragaria x ananassa HOM05D001035 ORTHO05D001045 3.9e-16 89.0 63 63.5
Prupe.1G552900 Prunus persica HOM05D001035 ORTHO05D001045 3.9e-16 89.0 63 63.5
Lj3A34G36 Lonicera japonica HOM05D001035 ORTHO05D001045 6.6e-16 88.2 63 60.3
Eucgr.F03001 Eucalyptus grandis HOM05D001035 ORTHO05D001045 8.6e-16 87.8 63 65.1
Aqoxy5G03463 Aquilegia oxysepala HOM05D001035 ORTHO05D001045 1.5e-15 87.0 63 60.3
MD08G1219600 Malus domestica HOM05D001035 ORTHO05D001045 1.5e-15 87.0 63 61.9
Manes.02G196600 Manihot esculenta HOM05D001035 ORTHO05D001045 9.5e-15 84.3 63 63.5
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.2e-14 84.0 69 55.1
Nitab4.5_0002013g0020 Nicotiana tabacum HOM05D001035 ORTHO05D001045 1.6e-14 83.6 63 58.7
Peaxi162Scf00391g00737 Petunia axillaris HOM05D001035 ORTHO05D001045 2.1e-14 83.2 63 58.7
GSVIVG01036236001 Vitis vinifera HOM05D001035 ORTHO05D001045 2.1e-14 83.2 63 57.1
MBI03_g13494_MAGBIO Magnolia biondii HOM05D001035 ORTHO05D001045 3.6e-14 82.4 63 66.7
SGA_v2.0_scaffold118G32518 Striga asiatica HOM05D001035 ORTHO05D001045 3.6e-14 82.4 94 45.7
SGA_v2.0_scaffold118G32529 Striga asiatica HOM05D001035 ORTHO05D001045 3.6e-14 82.4 94 45.7
Ciclev10000204m.g Citrus clementina HOM05D001035 ORTHO05D001045 4.7e-14 82.0 63 58.7
HanXRQChr02g0044241 Helianthus annuus HOM05D001035 ORTHO05D001045 4.7e-14 82.0 70 54.3
Phvul.011G001200 Phaseolus vulgaris HOM05D001035 ORTHO05D001045 6.2e-14 81.6 63 61.9
Nitab4.5_0003211g0030 Nicotiana tabacum HOM05D001035 ORTHO05D001045 8.1e-14 81.3 63 57.1
TAR381G0676 Trochodendron aralioides HOM05D001035 ORTHO05D001045 1.1e-13 80.9 63 63.5
Atru.chr13.2382 Acer truncatum HOM05D001035 ORTHO05D001045 1.4e-13 80.5 63 57.1
Oeu013894.4 Olea europaea HOM05D001035 ORTHO05D001045 1.4e-13 80.5 63 61.9
Duzib116G0807 Durio zibethinus HOM05D001035 ORTHO05D001045 2.3e-13 79.7 69 56.5
Potri.019G080300 Populus trichocarpa HOM05D001035 ORTHO05D001045 2.3e-13 79.7 63 60.3
Thecc.08G188300 Theobroma cacao HOM05D001035 ORTHO05D001045 3.1e-13 79.3 63 60.3
Glyma.20G071666 Glycine max HOM05D001035 ORTHO05D001045 4.0e-13 79.0 65 58.5
Migut.C01305 Erythranthe guttata HOM05D001035 ORTHO05D001045 5.2e-13 78.6 63 57.1
Glyma.08G238800 Glycine max HOM05D001035 ORTHO05D001045 5.2e-13 78.6 63 58.7
VMungo1127G0841 Vigna mungo HOM05D001035 ORTHO05D001045 5.2e-13 78.6 63 60.3
arahy.Tifrunner.gnm1.ann1.LX8XJC Arachis hypogaea HOM05D001035 ORTHO05D001045 8.9e-13 77.8 63 58.7
Sopen11g011250 Solanum pennellii HOM05D001035 ORTHO05D001045 8.9e-13 77.8 63 54.0
ClCG11G008620 Citrullus lanatus HOM05D001035 ORTHO05D001045 1.2e-12 77.4 104 40.4
Cc10_g10150 Coffea canephora HOM05D001035 ORTHO05D001045 1.2e-12 77.4 63 54.0
CAN.G102.4 Capsicum annuum HOM05D001035 ORTHO05D001045 1.5e-12 77.0 62 53.2
Cpa.g.sc66.12 Carica papaya HOM05D001035 ORTHO05D001045 1.5e-12 77.0 63 60.3
Nn3g18383 Nelumbo nucifera HOM05D001035 ORTHO05D001045 1.5e-12 77.0 63 58.7
Gohir.A02G087300 Gossypium hirsutum HOM05D001035 ORTHO05D001045 2.0e-12 76.6 63 57.1
Psat7g225680 Pisum sativum HOM05D001035 ORTHO05D001045 2.0e-12 76.6 66 56.1
SalBow7G3463 Salvia bowleyana HOM05D001035 ORTHO05D001045 2.0e-12 76.6 63 58.7
Lj3g0009046 Lotus japonicus HOM05D001035 ORTHO05D001045 2.6e-12 76.3 66 54.5
Sabra19G0091500 Salix brachista HOM05D001035 ORTHO05D001045 2.6e-12 76.3 63 60.3
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 2.6e-12 76.3 63 60.3
arahy.Tifrunner.gnm1.ann1.V13CJX Arachis hypogaea HOM05D001035 ORTHO05D001045 4.4e-12 75.5 63 57.1
Medtr4g032925 Medicago truncatula HOM05D001035 ORTHO05D001045 4.4e-12 75.5 62 59.7
Medtr4g032935 Medicago truncatula HOM05D001035 ORTHO05D001045 4.4e-12 75.5 62 59.7
Sabra13G0093300 Salix brachista HOM05D001035 ORTHO05D001045 4.4e-12 75.5 64 54.7
Gohir.D02G102100 Gossypium hirsutum HOM05D001035 ORTHO05D001045 5.8e-12 75.1 63 55.6
Gorai.005G115800 Gossypium raimondii HOM05D001035 ORTHO05D001045 5.8e-12 75.1 63 55.6
TPR.G34169 Trifolium pratense HOM05D001035 ORTHO05D001045 5.8e-12 75.1 66 54.5
TWI14G1389 Tripterygium wilfordii HOM05D001035 ORTHO05D001045 7.5e-12 74.7 63 54.0
Lalb_Chr01g0000111 Lupinus albus HOM05D001035 ORTHO05D001045 1.3e-11 73.9 63 54.0
Potri.013G107950 Populus trichocarpa HOM05D001035 ORTHO05D001045 1.3e-11 73.9 64 54.7
PGR042G2161 Punica granatum HOM05D001035 ORTHO05D001045 1.3e-11 73.9 63 55.6
Ca_19705_v3 Cicer arietinum L. HOM05D001035 ORTHO05D001045 2.2e-11 73.2 63 55.6
Glyma.12G001200 Glycine max HOM05D001035 ORTHO05D001045 2.2e-11 73.2 63 57.1
Lsat_1_v5_gn_1_12260 Lactuca sativa HOM05D001035 ORTHO05D001045 2.2e-11 73.2 72 51.4
Sed0015270 Sechium edule HOM05D001035 ORTHO05D001045 3.7e-11 72.4 104 37.5
DCAR_011522 Daucus carota HOM05D001035 ORTHO05D001045 4.9e-11 72.0 63 52.4
Sc26g0000520 Simmondsia chinensis HOM05D001035 ORTHO05D001045 4.9e-11 72.0 62 53.2
AUR62004617 Chenopodium quinoa HOM05D001035 ORTHO05D001045 6.4e-11 71.6 64 50.0
AUR62022644 Chenopodium quinoa HOM05D001035 ORTHO05D001045 6.4e-11 71.6 64 50.0
MELO3C008069.2 Cucumis melo HOM05D001035 ORTHO05D001045 6.4e-11 71.6 104 38.5
CANSAT01G0217 Cannabis sativa HOM05D001035 ORTHO05D001045 1.4e-10 70.5 61 57.4
THA.LOC104810575 Tarenaya hassleriana HOM05D001035 ORTHO05D001045 1.4e-10 70.5 83 48.2
CsaV3_2G033000 Cucumis sativus L. HOM05D001035 ORTHO05D001045 1.9e-10 70.1 104 37.5
EL10Ac1g00120 Beta vulgaris HOM05D001035 ORTHO05D001045 3.2e-10 69.3 64 51.6
Hund27102 Selenicereus undatus HOM05D001035 ORTHO05D001045 3.2e-10 69.3 64 54.7
DCAR_001460 Daucus carota HOM05D001035 ORTHO05D001045 1.2e-09 67.4 61 50.8
PSO170G4043 Papaver somniferum HOM05D001035 ORTHO05D001045 1.2e-09 67.4 63 52.4
Aa31LG7G6510 Aethionema arabicum HOM05D001035 ORTHO05D001045 3.5e-09 65.9 63 54.0
Ah.05g178430 Amaranthus hybridus HOM05D001035 ORTHO05D001045 3.5e-09 65.9 74 43.2
PSO017G4800 Papaver somniferum HOM05D001035 ORTHO05D001045 4.6e-09 65.5 63 50.8
BcaB07g32272 Brassica carinata HOM05D001035 ORTHO05D001045 1.3e-08 63.9 83 45.8
unitig_32.g11184 Utricularia gibba HOM05D001035 ORTHO05D007098 1.3e-08 63.9 66 43.9
AL1G36150 Arabidopsis lyrata HOM05D001035 ORTHO05D001045 1.7e-08 63.5 83 45.8
ATR0693G444 Amborella trichopoda HOM05D001035 ORTHO05D001045 3.0e-08 62.8 63 50.8
BcaC06g34979 Brassica carinata HOM05D001035 ORTHO05D001045 3.0e-08 62.8 83 47.0
C07p21000 Brassica napus HOM05D001035 ORTHO05D001045 3.0e-08 62.8 83 47.0
BolC7t42632H Brassica oleracea HOM05D001035 ORTHO05D001045 3.0e-08 62.8 83 47.0
BolC8t49800H Brassica oleracea HOM05D001035 ORTHO05D001045 3.0e-08 62.8 83 44.6
Carub.0001s2213 Capsella rubella HOM05D001035 ORTHO05D001045 3.0e-08 62.8 87 43.7
AT1G22620 Arabidopsis thaliana HOM05D001035 ORTHO05D001045 3.9e-08 62.4 83 45.8
Thhalv10006740m.g Eutrema salsugineum HOM05D001035 ORTHO05D001045 3.9e-08 62.4 83 44.6
Sp1g20120 Schrenkiella parvula HOM05D001035 ORTHO05D001045 3.9e-08 62.4 83 44.6
CARHR022990 Cardamine hirsuta HOM05D001035 ORTHO05D001045 5.1e-08 62.0 83 42.2
CDE02G2546 Ceratophyllum demersum HOM05D001035 ORTHO05D001045 5.1e-08 62.0 62 51.6
BcaB03g11914 Brassica carinata HOM05D001035 ORTHO05D001045 6.6e-08 61.6 83 43.4
A07p14280 Brassica napus HOM05D001035 ORTHO05D001045 8.6e-08 61.2 83 45.8
BraA07t29185Z Brassica rapa HOM05D001035 ORTHO05D001045 8.6e-08 61.2 83 45.8
BcaC07g39169 Brassica carinata HOM05D001035 ORTHO05D001045 1.1e-07 60.8 63 49.2
A08p28460 Brassica napus HOM05D001035 ORTHO05D001045 1.1e-07 60.8 83 43.4
C08p21620 Brassica napus HOM05D001035 ORTHO05D001045 1.1e-07 60.8 63 49.2
BraA08t34775Z Brassica rapa HOM05D001035 ORTHO05D001045 1.1e-07 60.8 83 43.4
vmacro00749 Vaccinium macrocarpon HOM05D001035 ORTHO05D001045 1.9e-07 60.1 33 87.9
HPP92_001194 Vanilla planifolia HOM05D001035 ORTHO05D001045 3.3e-07 59.3 63 47.6
Solyc11g022380.3 Solanum lycopersicum HOM05D001035 ORTHO05D001045 7.3e-07 58.2 63 44.4
SEGI_16379 Sequoiadendron giganteum HOM05D001035 ORTHO05D001045 1.6e-06 57.0 63 44.4
Os08g0109100 Oryza sativa ssp. japonica HOM05D001035 ORTHO05D001045 2.8e-06 56.2 74 41.9
BcaB03g14194 Brassica carinata HOM05D001035 ORTHO05D001045 3.6e-06 55.8 60 48.3


User provided reference genes

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