Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 0.0e+00 1570.4 780 100.0
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 0.0e+00 1529.6 780 97.8
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 0.0e+00 1137.5 796 72.9
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 0.0e+00 1136.3 796 73.2
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 0.0e+00 1125.5 799 72.0
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 0.0e+00 1113.6 820 70.2
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.2e-309 1066.2 789 69.1
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 4.2e-307 1057.7 795 66.2
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 3.3e-304 1048.1 791 66.5
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 6.2e-303 1043.9 789 66.5
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 4.0e-302 1041.2 789 66.7
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 1.9e-299 1032.3 793 65.2
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 3.5e-298 1028.1 808 63.4
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.5e-293 1012.7 798 65.3
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 5.9e-293 1010.7 794 64.2
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 1.6e-290 1002.7 781 62.9
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 6.3e-287 990.7 630 79.0
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 1.4e-286 989.6 795 63.4
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.5e-285 986.1 796 63.2
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 5.9e-285 984.2 809 62.2
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 2.5e-283 978.8 794 62.6
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.0e-281 973.4 794 62.2
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 2.3e-281 972.2 809 62.1
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 3.0e-281 971.8 794 62.2
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 6.7e-281 970.7 635 77.0
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 3.3e-280 968.4 792 63.4
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 5.7e-280 967.6 809 62.3
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 5.3e-278 961.1 797 62.4
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 9.1e-278 960.3 784 62.0
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.2e-277 959.9 849 58.9
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 3.4e-277 958.4 800 61.0
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 3.4e-277 958.4 801 60.4
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 1.3e-276 956.4 782 61.8
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 1.7e-276 956.1 796 62.1
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.2e-276 955.7 794 61.6
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 6.5e-276 954.1 812 59.4
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 1.4e-275 953.0 794 61.2
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 3.2e-275 951.8 784 60.6
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 4.2e-275 951.4 863 58.5
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 4.2e-275 951.4 784 61.1
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 6.1e-274 947.6 786 60.6
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 1.0e-273 946.8 808 60.5
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 1.1e-272 943.3 784 60.2
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.6e-272 942.2 793 60.5
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 7.4e-272 940.6 799 60.8
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-271 939.9 794 60.2
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 2.8e-271 938.7 790 60.4
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 1.8e-270 936.0 786 60.2
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 1.2e-269 933.3 784 59.7
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.6e-269 932.9 794 60.2
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 3.5e-269 931.8 794 60.1
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 7.7e-269 930.6 794 59.8
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.0e-268 930.2 794 59.9
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 5.0e-268 927.9 800 59.1
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 1.1e-267 926.8 847 56.7
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 2.5e-267 925.6 789 59.6
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 2.3e-265 919.1 798 59.8
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 4.1e-262 908.3 789 58.3
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 2.1e-258 896.0 806 56.7
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.6e-258 895.2 806 56.5
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 1.8e-257 892.9 794 57.1
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 2.6e-256 889.0 790 57.3
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 4.4e-256 888.3 789 58.3
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 1.0e-249 867.1 786 57.0
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 1.4e-249 866.7 802 55.0
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 1.8e-249 866.3 797 56.2
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 8.3e-247 857.4 803 54.0
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 1.8e-246 856.3 801 56.4
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.0e-244 850.5 741 60.2
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 1.3e-244 850.1 817 57.5
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 6.6e-244 847.8 793 56.2
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 8.6e-244 847.4 799 54.2
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 1.5e-243 846.7 806 54.1
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 9.5e-243 844.0 801 53.9
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 2.8e-242 842.4 797 56.0
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 8.9e-241 837.4 803 53.2
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 4.4e-240 835.1 805 53.7
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.1e-238 830.5 797 53.7
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.8e-238 829.7 797 53.7
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 2.0e-237 826.2 798 54.4
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 1.4e-233 813.5 787 55.5
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 3.1e-233 812.4 800 52.9
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 1.2e-232 810.4 776 54.9
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.5e-232 810.1 787 55.1
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 6.4e-231 804.7 762 54.3
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 2.3e-228 796.2 797 52.4
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 1.4e-217 760.4 780 49.9
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 1.6e-205 720.3 585 64.4
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 1.7e-204 716.8 671 54.4
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 5.1e-204 715.3 814 49.1
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 5.3e-201 705.3 642 59.7
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.5e-200 703.7 780 49.2
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.9e-179 633.6 791 49.9
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 1.4e-177 627.5 802 44.4
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 4.5e-168 595.9 593 54.1
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 1.6e-149 534.3 776 40.7
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 9.8e-131 471.9 794 38.2
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 2.4e-105 387.5 851 34.5
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 7.3e-94 349.4 410 48.3
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 9.6e-94 349.0 247 68.0
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 3.6e-93 347.1 297 57.6
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 1.5e-91 341.7 251 68.5
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 7.6e-91 339.3 289 58.5
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 2.2e-90 337.8 287 57.8
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 4.6e-88 330.1 844 30.5
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.7e-82 311.6 307 56.7
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 5.1e-79 300.1 252 58.3
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.8e-61 241.1 194 65.5
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 4.5e-51 207.2 206 50.5
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.9e-49 201.8 139 69.1
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 5.5e-49 200.3 211 49.3
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 3.3e-46 191.0 168 57.1
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 5.3e-36 157.1 1013 21.3
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 8.5e-34 149.8 87 81.6
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 4.2e-33 147.5 274 36.1
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 8.8e-23 113.2 119 50.4
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 6.8e-15 87.0 243 30.0
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 4.9e-13 80.9 68 52.9
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.0e-10 73.2 50 72.0
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 1.7e-10 72.4 49 71.4
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 6.6e-10 70.5 210 27.1
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 4.3e-09 67.8 45 64.4


User provided reference genes

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