Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.6e-54 215.7 98 100.0
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.6e-54 215.7 98 100.0
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 5.3e-50 200.7 98 90.8
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 5.8e-49 197.2 98 86.7
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 5.0e-48 194.1 97 86.6
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 5.0e-48 194.1 98 84.7
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.1e-47 193.0 98 84.7
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.9e-47 192.2 98 87.8
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 1.9e-47 192.2 98 84.7
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 1.9e-47 192.2 98 85.7
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 4.2e-47 191.0 98 83.7
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 5.5e-47 190.7 98 83.7
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 7.1e-47 190.3 98 83.7
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 7.1e-47 190.3 98 83.7
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 2.7e-46 188.3 95 86.3
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 3.5e-46 188.0 98 83.7
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 6.1e-46 187.2 96 82.3
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 7.9e-46 186.8 98 82.7
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 1.8e-45 185.7 91 86.8
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 3.9e-45 184.5 98 82.7
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 1.5e-44 182.6 90 86.7
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 1.5e-44 182.6 90 86.7
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 1.5e-44 182.6 90 86.7
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 1.9e-44 182.2 91 83.5
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 4.3e-44 181.0 91 83.5
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 4.3e-44 181.0 98 77.6
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 4.3e-44 181.0 97 77.3
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 5.7e-44 180.6 89 86.5
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 7.4e-44 180.3 98 77.6
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 7.4e-44 180.3 98 77.6
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 9.7e-44 179.9 100 79.0
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 9.7e-44 179.9 100 79.0
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 9.7e-44 179.9 94 83.0
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 2.2e-43 178.7 98 76.5
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 2.2e-43 178.7 94 79.8
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 2.8e-43 178.3 98 79.6
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 2.8e-43 178.3 91 82.4
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 3.7e-43 177.9 98 78.6
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 3.7e-43 177.9 94 79.8
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 4.8e-43 177.6 98 76.5
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 4.8e-43 177.6 98 78.6
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 4.8e-43 177.6 98 79.6
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.8e-43 177.6 98 79.6
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 8.2e-43 176.8 91 82.4
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 8.2e-43 176.8 91 81.3
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 8.2e-43 176.8 98 75.5
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.2e-43 176.8 94 78.7
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.2e-43 176.8 94 78.7
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 8.2e-43 176.8 94 78.7
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 8.2e-43 176.8 94 78.7
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 8.2e-43 176.8 97 75.3
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.4e-42 176.0 94 78.7
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.4e-42 176.0 94 78.7
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.4e-42 176.0 95 77.9
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 1.8e-42 175.6 91 80.2
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 1.8e-42 175.6 91 80.2
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 1.8e-42 175.6 96 76.0
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 2.4e-42 175.3 94 79.8
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 3.1e-42 174.9 94 77.7
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.1e-42 174.9 91 81.3
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 4.1e-42 174.5 96 77.1
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 5.3e-42 174.1 91 79.1
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 5.3e-42 174.1 91 82.4
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 5.3e-42 174.1 91 80.2
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 6.9e-42 173.7 89 84.3
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 6.9e-42 173.7 91 81.3
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 6.9e-42 173.7 94 75.5
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 6.9e-42 173.7 94 75.5
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 9.0e-42 173.3 98 76.5
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 1.2e-41 172.9 98 78.6
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.2e-41 172.9 91 79.1
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 2.0e-41 172.2 95 76.8
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.6e-41 171.8 90 82.2
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.6e-41 171.8 90 82.2
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 2.6e-41 171.8 98 73.5
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.6e-41 171.8 94 77.7
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.4e-41 171.4 91 79.1
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.4e-41 171.4 91 80.2
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 3.4e-41 171.4 91 78.0
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 3.4e-41 171.4 98 75.5
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.9e-41 170.6 88 83.0
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 5.9e-41 170.6 91 81.3
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 5.9e-41 170.6 91 80.2
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 1.0e-40 169.9 98 73.5
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.3e-40 169.5 91 78.0
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.3e-40 169.5 90 80.0
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 1.3e-40 169.5 91 76.9
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 3.8e-40 167.9 91 75.8
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 3.8e-40 167.9 95 75.8
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 6.5e-40 167.2 91 73.6
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.5e-40 167.2 94 74.5
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 6.5e-40 167.2 90 78.9
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 6.5e-40 167.2 91 76.9
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 6.5e-40 167.2 91 79.1
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 1.1e-39 166.4 91 79.1
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 1.1e-39 166.4 98 73.5
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 3.2e-39 164.9 86 79.1
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 7.2e-39 163.7 98 70.4
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 9.4e-39 163.3 111 65.8
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 2.7e-38 161.8 95 75.8
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 6.1e-38 160.6 91 74.7
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 6.1e-38 160.6 113 66.4
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 1.8e-37 159.1 94 71.3
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 8.8e-37 156.8 78 83.3
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 1.5e-36 156.0 96 64.6
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 2.0e-36 155.6 96 66.7
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 2.5e-36 155.2 96 66.7
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 3.3e-36 154.8 96 66.7
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 4.3e-36 154.5 94 67.0
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 4.3e-36 154.5 94 67.0
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 4.3e-36 154.5 94 67.0
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 4.3e-36 154.5 91 70.3
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 7.4e-36 153.7 94 70.2
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 9.7e-36 153.3 91 69.2
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 1.3e-35 152.9 94 66.0
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 1.3e-35 152.9 94 66.0
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 1.3e-35 152.9 94 66.0
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 1.3e-35 152.9 94 66.0
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 1.3e-35 152.9 94 66.0
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 2.2e-35 152.1 94 67.0
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 2.8e-35 151.8 94 68.1
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.8e-34 149.1 82 75.6
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.2e-33 146.4 105 62.9
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.3e-32 142.9 78 80.8
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.8e-32 141.4 80 80.0
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.8e-29 132.5 74 74.3
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.1e-28 129.8 89 60.7
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 5.7e-28 127.5 74 75.7
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 4.8e-27 124.4 63 79.4
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 1.1e-26 123.2 67 76.1
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 5.9e-25 117.5 71 71.8
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.5e-23 112.8 61 82.0
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 1.9e-23 112.5 61 78.7
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.2e-22 109.8 74 66.2
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 1.0e-16 90.1 68 51.5
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 1.6e-14 82.8 66 50.0
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 1.4e-13 79.7 61 57.4
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.2e-12 76.6 43 74.4
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 2.2e-08 62.4 57 43.9


User provided reference genes

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