Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025551 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D112514 5.3e-27 123.6 63 100.0
CSS0039676 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D002004 1.3e-22 109.0 74 81.1
CSS0029347 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D002004 6.3e-12 73.6 50 76.0
CSS0029177 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D002004 1.1e-11 72.8 62 66.1
vmacro18482 Vaccinium macrocarpon HOM05D000206 ORTHO05D002004 2.6e-10 68.2 62 59.7
Rhsim08G0023800 Rhododendron simsii HOM05D000206 ORTHO05D002004 5.9e-10 67.0 62 61.3
Dinv28286 Davidia involucrata HOM05D000206 ORTHO05D002004 1.0e-09 66.2 60 63.3
QL06p053550 Quercus lobata HOM05D000206 ORTHO05D002004 1.7e-09 65.5 59 64.4
Ciclev10009037m.g Citrus clementina HOM05D000206 ORTHO05D002004 2.9e-09 64.7 60 58.3
GSVIVG01026415001 Vitis vinifera HOM05D000206 ORTHO05D002004 3.8e-09 64.3 60 60.0
Dinv19112 Davidia involucrata HOM05D000206 ORTHO05D002004 5.0e-09 63.9 60 61.7
Dinv29564 Davidia involucrata HOM05D000206 ORTHO05D002004 1.1e-08 62.8 60 58.3
Dinv29570 Davidia involucrata HOM05D000206 ORTHO05D002004 1.1e-08 62.8 60 58.3
Rhsim08G0024600 Rhododendron simsii HOM05D000206 ORTHO05D002004 1.1e-08 62.8 59 61.0
Oeu024777.1 Olea europaea HOM05D000206 ORTHO05D002004 1.4e-08 62.4 60 56.7
Atru.chr3.4 Acer truncatum HOM05D000206 ORTHO05D002004 1.9e-08 62.0 60 56.7
PGR119G0947 Punica granatum HOM05D000206 ORTHO05D002004 1.9e-08 62.0 60 56.7
CiPaw.13G127500 Carya illinoinensis HOM05D000206 ORTHO05D002004 4.2e-08 60.8 60 53.3
CiPaw.13G127600 Carya illinoinensis HOM05D000206 ORTHO05D002004 4.2e-08 60.8 60 53.3
RcHm_v2.0_Chr2g0096611 Rosa chinensis HOM05D000206 ORTHO05D002004 4.2e-08 60.8 60 55.0
CAN.G883.10 Capsicum annuum HOM05D000206 ORTHO05D002004 5.5e-08 60.5 59 54.2
Nitab4.5_0011544g0010 Nicotiana tabacum HOM05D000206 ORTHO05D002004 5.5e-08 60.5 58 56.9
Nitab4.5_0012341g0020 Nicotiana tabacum HOM05D000206 ORTHO05D002004 5.5e-08 60.5 58 56.9
Peaxi162Scf00981g00113 Petunia axillaris HOM05D000206 ORTHO05D002004 5.5e-08 60.5 58 55.2
RcHm_v2.0_Chr6g0310881 Rosa chinensis HOM05D000206 ORTHO05D002004 5.5e-08 60.5 60 56.7
Cfa007123 Carpinus fangiana HOM05D000206 ORTHO05D002004 7.2e-08 60.1 60 55.0
Dinv19109 Davidia involucrata HOM05D000206 ORTHO05D002004 7.2e-08 60.1 60 60.0
Actinidia35694 Actinidia chinensis HOM05D000206 ORTHO05D002004 1.6e-07 58.9 60 55.0
Dinv29566 Davidia involucrata HOM05D000206 ORTHO05D002004 1.6e-07 58.9 58 56.9
Duzib138G1234 Durio zibethinus HOM05D000206 ORTHO05D002004 1.6e-07 58.9 60 55.0
Hma1.2p1_0085F.1_g044210 Hydrangea macrophylla HOM05D000206 ORTHO05D002004 1.6e-07 58.9 55 61.8
PGSC0003DMG400009427 Solanum tuberosum HOM05D000206 ORTHO05D002004 1.6e-07 58.9 59 52.5
DCAR_006176 Daucus carota HOM05D000206 ORTHO05D002004 2.1e-07 58.5 55 61.8
Dinv26675 Davidia involucrata HOM05D000206 ORTHO05D002004 2.1e-07 58.5 57 57.9
Dinv29563 Davidia involucrata HOM05D000206 ORTHO05D002004 2.1e-07 58.5 57 56.1
Gorai.001G212500 Gossypium raimondii HOM05D000206 ORTHO05D002004 2.1e-07 58.5 57 57.9
Solyc02g068315.1 Solanum lycopersicum HOM05D000206 ORTHO05D002004 2.1e-07 58.5 59 52.5
Sopen02g017420 Solanum pennellii HOM05D000206 ORTHO05D002004 2.1e-07 58.5 59 52.5
Hma1.2p1_0085F.1_g044190 Hydrangea macrophylla HOM05D000206 ORTHO05D002004 2.7e-07 58.2 53 60.4
QL02p035486 Quercus lobata HOM05D000206 ORTHO05D002004 3.6e-07 57.8 60 56.7
Dinv26674 Davidia involucrata HOM05D000206 ORTHO05D002004 4.6e-07 57.4 57 56.1
Cfa020813 Carpinus fangiana HOM05D000206 ORTHO05D002004 6.1e-07 57.0 59 54.2
COL.COLO4_24532 Corchorus olitorius HOM05D000206 ORTHO05D002004 6.1e-07 57.0 58 55.2
Haze_19173 Corylus avellana HOM05D000206 ORTHO05D002004 6.1e-07 57.0 60 53.3
Haze_19187 Corylus avellana HOM05D000206 ORTHO05D002004 6.1e-07 57.0 60 53.3
Dinv29567 Davidia involucrata HOM05D000206 ORTHO05D002004 7.9e-07 56.6 60 55.0
Gohir.D07G190400 Gossypium hirsutum HOM05D000206 ORTHO05D002004 7.9e-07 56.6 56 57.1
Migut.K00869 Erythranthe guttata HOM05D000206 ORTHO05D002004 1.0e-06 56.2 54 59.3
Lj2A507T49 Lonicera japonica HOM05D000206 ORTHO05D002004 1.4e-06 55.8 57 56.1
Gohir.A07G183700 Gossypium hirsutum HOM05D000206 ORTHO05D002004 1.8e-06 55.5 57 54.4
Manes.01G158700 Manihot esculenta HOM05D000206 ORTHO05D002004 1.8e-06 55.5 57 52.6
TPR.G33746 Trifolium pratense HOM05D000141 ORTHO05D004489 1.8e-06 55.5 56 50.0
AT1G14120 Arabidopsis thaliana HOM05D000206 ORTHO05D002004 2.3e-06 55.1 69 44.9
CANSAT64G1403 Cannabis sativa HOM05D000206 ORTHO05D002004 2.3e-06 55.1 60 48.3
Cfa010665 Carpinus fangiana HOM05D000206 ORTHO05D002004 2.3e-06 55.1 59 52.5
Dinv26676 Davidia involucrata HOM05D000206 ORTHO05D002004 2.3e-06 55.1 56 53.6
FvH4_1g09830 Fragaria vesca HOM05D000206 ORTHO05D002004 2.3e-06 55.1 60 53.3
FAN19G2057 Fragaria x ananassa HOM05D000206 ORTHO05D002004 2.3e-06 55.1 60 53.3
DCAR_006175 Daucus carota HOM05D000206 ORTHO05D002004 3.0e-06 54.7 55 58.2
Dinv26677 Davidia involucrata HOM05D000206 ORTHO05D002004 3.0e-06 54.7 60 51.7
PSO017G4970 Papaver somniferum HOM05D000206 ORTHO05D002004 3.0e-06 54.7 57 56.1
PSO170G4790 Papaver somniferum HOM05D000206 ORTHO05D002004 3.0e-06 54.7 57 56.1
Sopen02g017410 Solanum pennellii HOM05D000206 ORTHO05D002004 3.0e-06 54.7 59 49.2
Thecc.01G171100 Theobroma cacao HOM05D000206 ORTHO05D002004 3.0e-06 54.7 60 53.3
MD02G1107000 Malus domestica HOM05D000206 ORTHO05D002004 3.9e-06 54.3 61 54.1
Solyc02g068330.2 Solanum lycopersicum HOM05D000206 ORTHO05D002004 3.9e-06 54.3 56 51.8
Sopen02g017430 Solanum pennellii HOM05D000206 ORTHO05D002004 3.9e-06 54.3 56 51.8
FAN23G2017 Fragaria x ananassa HOM05D000206 ORTHO05D002004 5.1e-06 53.9 57 54.4
Lj8A143T56 Lonicera japonica HOM05D000206 ORTHO05D002004 5.1e-06 53.9 59 50.8
MD10G1316500 Malus domestica HOM05D000206 ORTHO05D002004 5.1e-06 53.9 60 50.0
PSO170G4451 Papaver somniferum HOM05D000206 ORTHO05D002004 5.1e-06 53.9 57 56.1
PGR119G0734 Punica granatum HOM05D000206 ORTHO05D002004 5.1e-06 53.9 60 50.0
RcHm_v2.0_Chr2g0096111 Rosa chinensis HOM05D000206 ORTHO05D002004 5.1e-06 53.9 60 50.0
Actinidia35172 Actinidia chinensis HOM05D000206 ORTHO05D002004 6.7e-06 53.5 59 50.8
Eucgr.I02177 Eucalyptus grandis HOM05D000206 ORTHO05D002004 6.7e-06 53.5 60 53.3
Lj2g0012095 Lotus japonicus HOM05D000206 ORTHO05D002004 6.7e-06 53.5 57 49.1
Cfa005416 Carpinus fangiana HOM05D000206 ORTHO05D002004 8.8e-06 53.1 56 53.6
Cfa020817 Carpinus fangiana HOM05D000206 ORTHO05D002004 8.8e-06 53.1 59 52.5
FAN23G2866 Fragaria x ananassa HOM05D000206 ORTHO05D002004 8.8e-06 53.1 60 51.7


User provided reference genes

Program Settings