Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.0e-180 634.4 343 100.0
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.5e-179 630.9 343 99.4
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 4.9e-159 564.7 344 87.5
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.0e-128 463.0 343 74.9
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.1e-49 201.4 409 43.8
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 5.6e-38 162.5 348 38.8
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 4.0e-28 129.8 346 34.1
Actinidia20741 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.2e-27 128.3 285 41.4
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 2.0e-27 127.5 358 33.2
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 4.4e-27 126.3 350 33.4
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 1.3e-26 124.8 348 34.2
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 2.2e-26 124.0 365 34.5
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 9.3e-25 118.6 345 32.5
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 3.9e-23 113.2 357 32.8
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 1.1e-22 111.7 362 31.8
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 9.6e-22 108.6 363 33.6
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 1.3e-21 108.2 356 32.0
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 2.1e-21 107.5 361 33.2
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 2.4e-20 104.0 356 32.3
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.2e-19 101.7 375 30.7
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 2.0e-19 100.9 372 30.9
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 4.4e-19 99.8 356 29.5
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 1.7e-18 97.8 347 31.1
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 4.9e-18 96.3 351 30.2
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 6.4e-18 95.9 345 29.9
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 4.2e-17 93.2 345 30.1
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 7.1e-17 92.4 372 29.6
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 7.1e-17 92.4 346 28.3
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 3.5e-16 90.1 361 29.4
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 4.6e-16 89.7 339 28.9
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.6e-16 89.7 348 28.7
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 6.0e-16 89.4 342 31.0
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.7e-15 87.8 346 30.1
CSS0008692 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.1e-15 86.3 67 71.6
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 5.1e-15 86.3 360 30.0
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 8.7e-15 85.5 351 29.6
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 1.5e-14 84.7 353 27.5
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.5e-14 84.7 369 27.6
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.5e-14 84.7 366 28.1
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 2.5e-14 84.0 357 28.9
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 7.3e-14 82.4 370 28.9
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 1.3e-13 81.6 376 29.3
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 2.1e-13 80.9 360 27.2
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 2.8e-13 80.5 349 30.1
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 4.8e-13 79.7 365 26.8
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 6.2e-13 79.3 366 29.5
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 8.1e-13 79.0 345 28.7
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 1.1e-12 78.6 352 24.1
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.4e-12 78.2 370 26.5
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 4.0e-12 76.6 354 27.7
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 5.3e-12 76.3 353 28.6
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 5.3e-12 76.3 363 28.7
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 6.9e-12 75.9 383 27.2
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 9.0e-12 75.5 348 29.9
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 9.0e-12 75.5 355 27.6
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.6e-11 73.9 349 27.8
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 2.6e-11 73.9 366 27.3
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.6e-11 73.9 341 27.0
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 2.6e-11 73.9 357 26.9
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 1.3e-10 71.6 337 26.7
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 1.7e-10 71.2 365 24.7
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 1.7e-10 71.2 382 27.7
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 1.7e-10 71.2 353 27.8
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 2.2e-10 70.9 342 28.1
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 2.9e-10 70.5 342 27.2
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 2.9e-10 70.5 345 25.8
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 3.8e-10 70.1 341 26.7
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 1.4e-09 68.2 362 29.3
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.4e-09 67.4 231 29.9
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 3.2e-09 67.0 354 27.1
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 3.2e-09 67.0 356 28.1
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 4.2e-09 66.6 367 27.5
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 5.4e-09 66.2 367 27.5
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 5.4e-09 66.2 349 27.2
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 7.1e-09 65.9 341 23.8
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 9.3e-09 65.5 356 26.1
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 9.3e-09 65.5 339 28.0
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 1.2e-08 65.1 346 27.5
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 1.2e-08 65.1 352 26.4
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 1.2e-08 65.1 352 26.4
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 1.6e-08 64.7 347 26.5
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 1.6e-08 64.7 320 26.9
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.6e-08 64.7 361 27.1
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 2.7e-08 63.9 367 26.2
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 4.6e-08 63.2 340 27.6
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 4.6e-08 63.2 345 24.6
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 6.0e-08 62.8 357 26.6
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 1.0e-07 62.0 354 26.3
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.0e-07 62.0 353 26.3
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.0e-07 62.0 377 28.1
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 1.3e-07 61.6 332 26.2
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 1.3e-07 61.6 352 25.3
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 1.8e-07 61.2 347 25.6
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.3e-07 60.8 358 26.3
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 2.3e-07 60.8 229 32.3
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 3.0e-07 60.5 222 31.1
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 3.9e-07 60.1 378 25.4
Hund14289 Selenicereus undatus HOM05D029928 ORTHO05D003520 5.1e-07 59.7 362 23.8
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 6.7e-07 59.3 359 25.6
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 8.7e-07 58.9 346 27.2
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 1.5e-06 58.2 371 27.5
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.9e-06 57.8 350 24.0
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 1.9e-06 57.8 344 27.3
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 2.5e-06 57.4 346 25.4
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 3.3e-06 57.0 236 28.8
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 3.3e-06 57.0 352 25.6
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 4.3e-06 56.6 348 23.6
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 4.3e-06 56.6 318 25.8
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 4.3e-06 56.6 349 25.5
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 5.6e-06 56.2 362 26.0
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 9.6e-06 55.5 349 26.4
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 9.6e-06 55.5 222 29.7
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 9.6e-06 55.5 252 29.0


User provided reference genes

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