Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025495 Camellia sinensis var. sinensis HOM05D029099 ORTHO05D000721 1.7e-51 205.7 101 100.0
CSS0047983 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 2.4e-29 132.1 132 58.3
CSS0007509 Camellia sinensis var. sinensis HOM05D029099 ORTHO05D000721 4.1e-21 104.8 101 58.4
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 5.3e-21 104.4 94 63.8
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 4.5e-20 101.3 80 66.2
Hma1.2p1_0026F.1_g016650 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.2e-17 93.2 106 52.8
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 4.7e-17 91.3 87 56.3
CSS0046819 Camellia sinensis var. sinensis HOM05D029099 ORTHO05D000721 1.8e-16 89.4 98 54.1
CSS0048769 Camellia sinensis var. sinensis HOM05D029099 ORTHO05D000721 2.0e-15 85.9 101 52.5
CANSAT56G3374 Cannabis sativa HOM05D001128 ORTHO05D000721 1.3e-14 83.2 114 46.5
Nn2g11296 Nelumbo nucifera HOM05D001128 ORTHO05D000721 1.8e-13 79.3 106 50.0
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 5.3e-13 77.8 102 45.1
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 1.2e-12 76.6 103 49.5
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 3.5e-12 75.1 90 51.1
Duzib093G0147 Durio zibethinus HOM05D001128 ORTHO05D000721 3.5e-12 75.1 100 51.0
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 3.5e-12 75.1 90 50.0
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 4.5e-12 74.7 108 44.4
Duzib106G0526 Durio zibethinus HOM05D001128 ORTHO05D000721 5.9e-12 74.3 102 44.1
COL.COLO4_14683 Corchorus olitorius HOM05D001128 ORTHO05D000721 1.0e-11 73.6 98 46.9
Ciclev10011799m.g Citrus clementina HOM05D001128 ORTHO05D000721 1.3e-11 73.2 107 45.8
Nn2g13535 Nelumbo nucifera HOM05D001128 ORTHO05D000721 1.3e-11 73.2 124 44.4
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 1.3e-11 73.2 87 54.0
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 1.3e-11 73.2 93 49.5
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 1.7e-11 72.8 102 47.1
Cc02_g07190 Coffea canephora HOM05D001128 ORTHO05D000721 3.8e-11 71.6 75 56.0
Gorai.012G073700 Gossypium raimondii HOM05D001128 ORTHO05D000721 3.8e-11 71.6 102 46.1
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 5.0e-11 71.2 106 47.2
Haze_20899 Corylus avellana HOM05D001128 ORTHO05D000721 8.5e-11 70.5 97 45.4
THA.LOC104805648 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 1.1e-10 70.1 103 42.7
Dinv35538 Davidia involucrata HOM05D001128 ORTHO05D000721 1.5e-10 69.7 96 45.8
Gohir.A05G346700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.5e-10 69.7 102 45.1
TWI77G0372 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.5e-10 69.7 89 47.2
Cfa017294 Carpinus fangiana HOM05D001128 ORTHO05D000721 1.9e-10 69.3 94 45.7
Duzib128G0075 Durio zibethinus HOM05D001128 ORTHO05D000721 1.9e-10 69.3 100 46.0
Potri.016G105000 Populus trichocarpa HOM05D001128 ORTHO05D000721 1.9e-10 69.3 103 45.6
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.5e-10 68.9 101 47.5
Gohir.D04G065500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.5e-10 68.9 102 45.1
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.5e-10 68.9 101 47.5
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 2.5e-10 68.9 101 47.5
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 2.5e-10 68.9 129 42.6
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 3.2e-10 68.6 94 48.9
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 3.2e-10 68.6 97 47.4
Haze_17155 Corylus avellana HOM05D001128 ORTHO05D000721 3.2e-10 68.6 109 45.9
Hma1.2p1_0671F.1_g200660 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 3.2e-10 68.6 93 47.3
MSTRG.5621 Avicennia marina HOM05D001128 ORTHO05D000721 5.5e-10 67.8 87 48.3
Thecc.05G027900 Theobroma cacao HOM05D001128 ORTHO05D000721 5.5e-10 67.8 100 46.0
MELO3C003199.2 Cucumis melo HOM05D001128 ORTHO05D000721 7.2e-10 67.4 89 47.2
ATR0210G013 Amborella trichopoda HOM05D001128 ORTHO05D000721 9.4e-10 67.0 103 42.7
ClCG04G007510 Citrullus lanatus HOM05D001128 ORTHO05D000721 9.4e-10 67.0 92 44.6
Gohir.A04G086100 Gossypium hirsutum HOM05D001128 ORTHO05D000721 9.4e-10 67.0 100 45.0
CsaV3_4G025740 Cucumis sativus L. HOM05D001128 ORTHO05D000721 1.2e-09 66.6 89 49.4
Migut.J00260 Erythranthe guttata HOM05D001128 ORTHO05D000721 1.2e-09 66.6 76 50.0
SalBow1G2079 Salvia bowleyana HOM05D001128 ORTHO05D000721 1.2e-09 66.6 83 48.2
Lsat_1_v5_gn_9_31700 Lactuca sativa HOM05D001128 ORTHO05D000721 1.6e-09 66.2 104 41.3
Atru.chr8.2106 Acer truncatum HOM05D001128 ORTHO05D000721 2.1e-09 65.9 103 43.7
Nitab4.5_0000119g0370 Nicotiana tabacum HOM05D001128 ORTHO05D000721 2.1e-09 65.9 86 46.5
Gohir.D04G126000 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.7e-09 65.5 100 45.0
Gorai.012G109000 Gossypium raimondii HOM05D001128 ORTHO05D000721 2.7e-09 65.5 100 45.0
CSS0004370 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 3.6e-09 65.1 102 42.2
CDE02G1727 Ceratophyllum demersum HOM05D001128 ORTHO05D000721 3.6e-09 65.1 75 46.7
Nitab4.5_0000008g0230 Nicotiana tabacum HOM05D001128 ORTHO05D000721 3.6e-09 65.1 131 40.5
MBI14_g02856_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 4.7e-09 64.7 76 55.3
CANSAT35G1304 Cannabis sativa HOM05D001128 ORTHO05D000721 8.0e-09 63.9 120 43.3
PGSC0003DMG400011730 Solanum tuberosum HOM05D001128 ORTHO05D000721 8.0e-09 63.9 88 47.7
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.0e-08 63.5 94 47.9
Actinidia14078 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.0e-08 63.5 95 47.4
CSS0013156 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.0e-08 63.5 88 48.9
CSS0030928 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.0e-08 63.5 88 48.9
Oeu018335.1 Olea europaea HOM05D001128 ORTHO05D000721 1.0e-08 63.5 93 41.9
Rhsim05G0200600 Rhododendron simsii HOM05D001128 ORTHO05D000721 1.0e-08 63.5 96 44.8
QL07p027947 Quercus lobata HOM05D001128 ORTHO05D000721 1.4e-08 63.2 96 45.8
vmacro20201 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 1.4e-08 63.2 148 38.5
Aqoxy1G00786 Aquilegia oxysepala HOM05D001128 ORTHO05D000721 1.8e-08 62.8 103 43.7
Gorai.006G178800 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.8e-08 62.8 99 46.5
Manes.09G099100 Manihot esculenta HOM05D001128 ORTHO05D000721 1.8e-08 62.8 104 44.2
CiPaw.01G293700 Carya illinoinensis HOM05D001128 ORTHO05D000721 2.3e-08 62.4 102 43.1
Nitab4.5_0003264g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 2.3e-08 62.4 127 41.7
Sabra16G0104100 Salix brachista HOM05D001128 ORTHO05D000721 2.3e-08 62.4 95 45.3
Oeu001830.1 Olea europaea HOM05D001128 ORTHO05D000721 3.0e-08 62.0 82 46.3
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 3.0e-08 62.0 113 42.5
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 3.0e-08 62.0 107 42.1
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 4.0e-08 61.6 127 40.9
MSTRG.19049 Avicennia marina HOM05D001128 ORTHO05D000721 5.2e-08 61.2 85 43.5
CiPaw.10G150200 Carya illinoinensis HOM05D001128 ORTHO05D000721 5.2e-08 61.2 103 41.7
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 5.2e-08 61.2 113 42.5
CDE09G1396 Ceratophyllum demersum HOM05D001128 ORTHO05D000721 6.7e-08 60.8 108 40.7
Gohir.A09G161600 Gossypium hirsutum HOM05D001128 ORTHO05D000721 6.7e-08 60.8 92 47.8
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 6.7e-08 60.8 132 38.6
Potri.006G093000 Populus trichocarpa HOM05D001128 ORTHO05D000721 6.7e-08 60.8 100 44.0
Lj3C959G13 Lonicera japonica HOM05D001128 ORTHO05D000721 8.8e-08 60.5 97 41.2
Nitab4.5_0000243g0040 Nicotiana tabacum HOM05D001128 ORTHO05D000721 8.8e-08 60.5 88 46.6
TWI09G0818 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 8.8e-08 60.5 99 41.4
Nitab4.5_0002822g0050 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.1e-07 60.1 95 43.2
MSTRG.10240 Avicennia marina HOM05D001128 ORTHO05D000721 1.5e-07 59.7 85 43.5
Oeu009915.1 Olea europaea HOM05D001128 ORTHO05D000721 1.5e-07 59.7 94 42.6
Cpa.g.sc56.66 Carica papaya HOM05D001128 ORTHO05D000721 2.0e-07 59.3 100 43.0
HanXRQChr06g0176291 Helianthus annuus HOM05D001128 ORTHO05D000721 2.0e-07 59.3 81 48.1
TWI74G1371 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 2.0e-07 59.3 95 41.1
Peaxi162Scf00014g01511 Petunia axillaris HOM05D001128 ORTHO05D000721 2.6e-07 58.9 82 40.2
PGR004G1424 Punica granatum HOM05D001128 ORTHO05D000721 2.6e-07 58.9 84 45.2
Nitab4.5_0011623g0010 Nicotiana tabacum HOM05D001128 ORTHO05D000721 3.3e-07 58.5 137 38.7
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 3.3e-07 58.5 134 38.8
Solyc09g011690.4 Solanum lycopersicum HOM05D001128 ORTHO05D000721 4.4e-07 58.2 86 45.3
Solyc10g084970.2 Solanum lycopersicum HOM05D001128 ORTHO05D000721 4.4e-07 58.2 87 44.8
Sopen09g006510 Solanum pennellii HOM05D001128 ORTHO05D000721 4.4e-07 58.2 86 45.3
Sopen10g034430 Solanum pennellii HOM05D001128 ORTHO05D000721 4.4e-07 58.2 87 44.8
PGSC0003DMG400011013 Solanum tuberosum HOM05D001128 ORTHO05D000721 4.4e-07 58.2 87 44.8
Ca_07581_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 5.7e-07 57.8 89 42.7
Sc10g0001950 Simmondsia chinensis HOM05D001128 ORTHO05D000721 5.7e-07 57.8 91 41.8
Gohir.D09G157200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 9.7e-07 57.0 99 43.4
Lsat_1_v5_gn_8_80861 Lactuca sativa HOM05D001128 ORTHO05D000721 9.7e-07 57.0 139 37.4
THA.LOC104823397 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 9.7e-07 57.0 110 40.0
DCAR_028803 Daucus carota HOM05D001128 ORTHO05D000721 1.3e-06 56.6 83 44.6
Peaxi162Scf00132g00911 Petunia axillaris HOM05D001128 ORTHO05D000721 1.3e-06 56.6 83 48.2
Sc22g0004330 Simmondsia chinensis HOM05D001128 ORTHO05D000721 1.3e-06 56.6 99 44.4
Nitab4.5_0000652g0060 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.7e-06 56.2 97 45.4
Nitab4.5_0002823g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.7e-06 56.2 97 42.3
EL10Ac6g15458 Beta vulgaris HOM05D001128 ORTHO05D000721 3.7e-06 55.1 75 50.7
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 3.7e-06 55.1 101 41.6
AT3G54000 Arabidopsis thaliana HOM05D001128 ORTHO05D000721 4.8e-06 54.7 83 41.0
CDE04G0001 Ceratophyllum demersum HOM05D001128 ORTHO05D000721 4.8e-06 54.7 73 49.3
Gorai.007G377500 Gossypium raimondii HOM05D001128 ORTHO05D000721 4.8e-06 54.7 82 43.9
Sed0025256 Sechium edule HOM05D001128 ORTHO05D000721 4.8e-06 54.7 88 38.6
ClCG10G021600 Citrullus lanatus HOM05D001128 ORTHO05D000721 6.3e-06 54.3 109 36.7
Gohir.D11G347100 Gossypium hirsutum HOM05D001128 ORTHO05D000721 6.3e-06 54.3 82 41.5
Gohir.A11G328200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 8.2e-06 53.9 82 41.5


User provided reference genes

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