Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025492 Camellia sinensis var. sinensis HOM05D000588 ORTHO05D112867 9.0e-96 353.6 180 100.0
TAR625G0646 Trochodendron aralioides HOM05D000588 ORTHO05D004275 6.8e-11 71.6 46 76.1
TAR633G2704 Trochodendron aralioides HOM05D000588 ORTHO05D004275 6.8e-11 71.6 46 76.1
Ciclev10028444m.g Citrus clementina HOM05D000588 ORTHO05D004275 1.2e-10 70.9 46 73.9
Atru.chr3.3897 Acer truncatum HOM05D000588 ORTHO05D004275 1.5e-10 70.5 46 73.9
PSO339G2986 Papaver somniferum HOM05D000588 ORTHO05D004275 1.5e-10 70.5 46 73.9
PSO384G2134 Papaver somniferum HOM05D000588 ORTHO05D004275 1.5e-10 70.5 46 73.9
CDE04G3587 Ceratophyllum demersum HOM05D000588 ORTHO05D004275 2.6e-10 69.7 45 75.6
CDE07G0122 Ceratophyllum demersum HOM05D000588 ORTHO05D004275 2.6e-10 69.7 45 75.6
Nn2g10372 Nelumbo nucifera HOM05D000588 ORTHO05D004275 2.6e-10 69.7 46 73.9
Nn5g26920 Nelumbo nucifera HOM05D000588 ORTHO05D004275 3.4e-10 69.3 46 73.9
TAR623G0371 Trochodendron aralioides HOM05D000588 ORTHO05D004275 3.4e-10 69.3 46 73.9
CiPaw.13G094900 Carya illinoinensis HOM05D000588 ORTHO05D004275 4.4e-10 68.9 40 85.0
Cc01_g12820 Coffea canephora HOM05D000588 ORTHO05D004275 4.4e-10 68.9 61 57.4
CSS0007929 Camellia sinensis var. sinensis HOM05D000588 ORTHO05D004275 5.8e-10 68.6 46 73.9
Cfa011497 Carpinus fangiana HOM05D000588 ORTHO05D004275 5.8e-10 68.6 46 71.7
Haze_24091 Corylus avellana HOM05D000588 ORTHO05D004275 5.8e-10 68.6 46 71.7
Manes.11G130800 Manihot esculenta HOM05D000588 ORTHO05D004275 5.8e-10 68.6 45 73.3
MELO3C020643.2 Cucumis melo HOM05D000588 ORTHO05D004275 9.8e-10 67.8 40 82.5
CsaV3_1G034110 Cucumis sativus L. HOM05D000588 ORTHO05D004275 9.8e-10 67.8 40 82.5
arahy.Tifrunner.gnm1.ann1.42PK2U Arachis hypogaea HOM05D000588 ORTHO05D004275 1.3e-09 67.4 46 71.7
arahy.Tifrunner.gnm1.ann1.60SBBK Arachis hypogaea HOM05D000588 ORTHO05D004275 1.3e-09 67.4 46 71.7
Cpa.g.sc1351.1 Carica papaya HOM05D000588 ORTHO05D004275 1.3e-09 67.4 45 73.3
COL.COLO4_18502 Corchorus olitorius HOM05D000588 ORTHO05D004275 1.3e-09 67.4 45 73.3
Gohir.A07G098300 Gossypium hirsutum HOM05D000588 ORTHO05D004275 1.3e-09 67.4 45 73.3
Gohir.D03G125900 Gossypium hirsutum HOM05D000588 ORTHO05D004275 1.3e-09 67.4 45 73.3
Gorai.001G110500 Gossypium raimondii HOM05D000588 ORTHO05D004275 1.3e-09 67.4 45 73.3
Gorai.003G132100 Gossypium raimondii HOM05D000588 ORTHO05D004275 1.3e-09 67.4 45 73.3
Os01g0841100 Oryza sativa ssp. japonica HOM05D000588 ORTHO05D004275 1.3e-09 67.4 59 57.6
Phvul.009G244800 Phaseolus vulgaris HOM05D000588 ORTHO05D004275 1.3e-09 67.4 46 71.7
VMungo1309G0153 Vigna mungo HOM05D000588 ORTHO05D004275 1.3e-09 67.4 46 71.7
Glyma.09G048100 Glycine max HOM05D000588 ORTHO05D004275 1.7e-09 67.0 46 71.7
Glyma.15G155400 Glycine max HOM05D000588 ORTHO05D004275 1.7e-09 67.0 46 71.7
Potri.018G097000 Populus trichocarpa HOM05D000588 ORTHO05D004275 1.7e-09 67.0 37 86.5
Sabra18G0084200 Salix brachista HOM05D000588 ORTHO05D004275 1.7e-09 67.0 37 86.5
Aqoxy4G02917 Aquilegia oxysepala HOM05D000588 ORTHO05D004275 2.2e-09 66.6 45 68.9
CiPaw.14G068600 Carya illinoinensis HOM05D000588 ORTHO05D004275 2.2e-09 66.6 39 82.1
Eucgr.B02370 Eucalyptus grandis HOM05D000588 ORTHO05D004275 2.2e-09 66.6 46 69.6
Actinidia37205 Actinidia chinensis HOM05D000588 ORTHO05D004275 2.9e-09 66.2 46 69.6
Duzib168G2354 Durio zibethinus HOM05D000588 ORTHO05D004275 2.9e-09 66.2 45 71.1
Nitab4.5_0000514g0120 Nicotiana tabacum HOM05D000588 ORTHO05D004275 2.9e-09 66.2 45 71.1
Nitab4.5_0002403g0050 Nicotiana tabacum HOM05D000588 ORTHO05D004275 2.9e-09 66.2 45 71.1
Thecc.09G322200 Theobroma cacao HOM05D000588 ORTHO05D004275 2.9e-09 66.2 45 71.1
Duzib170G0065 Durio zibethinus HOM05D000588 ORTHO05D004275 3.7e-09 65.9 45 71.1
SalBow2G2620 Salvia bowleyana HOM05D000588 ORTHO05D004275 3.7e-09 65.9 45 71.1
CANSAT21G2213 Cannabis sativa HOM05D000588 ORTHO05D004275 4.9e-09 65.5 40 80.0
SEGI_34657 Sequoiadendron giganteum HOM05D000588 ORTHO05D004275 4.9e-09 65.5 42 71.4
Zm00001eb367960 Zea mays HOM05D000588 ORTHO05D004275 4.9e-09 65.5 124 35.5
CSS0046782 Camellia sinensis var. sinensis HOM05D000588 ORTHO05D004275 6.4e-09 65.1 39 79.5
Gohir.D07G102600 Gossypium hirsutum HOM05D000588 ORTHO05D004275 6.4e-09 65.1 45 71.1
HanXRQChr05g0134901 Helianthus annuus HOM05D000588 ORTHO05D004275 6.4e-09 65.1 39 82.1
Lalb_Chr15g0083661 Lupinus albus HOM05D000588 ORTHO05D004275 6.4e-09 65.1 46 67.4
Manes.04G034700 Manihot esculenta HOM05D000588 ORTHO05D004275 6.4e-09 65.1 45 68.9
Migut.D02106 Erythranthe guttata HOM05D002226 ORTHO05D004275 8.3e-09 64.7 45 68.9
Lsat_1_v5_gn_8_73140 Lactuca sativa HOM05D000588 ORTHO05D004275 8.3e-09 64.7 39 79.5
Lj1P154T18 Lonicera japonica HOM05D000588 ORTHO05D004275 8.3e-09 64.7 46 67.4
PGR102G2795 Punica granatum HOM05D000588 ORTHO05D004275 8.3e-09 64.7 40 80.0
ClCG03G001570 Citrullus lanatus HOM05D000588 ORTHO05D004275 1.1e-08 64.3 40 77.5
Sed0018795 Sechium edule HOM05D000588 ORTHO05D004275 1.1e-08 64.3 46 67.4
Hma1.2p1_0418F.1_g149060 Hydrangea macrophylla HOM05D000588 ORTHO05D004275 1.4e-08 63.9 46 67.4
QL01p032133 Quercus lobata HOM05D000588 ORTHO05D004275 1.4e-08 63.9 46 67.4
PGSC0003DMG400030411 Solanum tuberosum HOM05D000588 ORTHO05D004275 1.4e-08 63.9 45 68.9
unitig_90.g27565 Utricularia gibba HOM05D000588 ORTHO05D004275 1.4e-08 63.9 45 68.9
CAN.G394.55 Capsicum annuum HOM05D000588 ORTHO05D004275 1.9e-08 63.5 45 66.7
Potri.006G174900 Populus trichocarpa HOM05D000588 ORTHO05D004275 1.9e-08 63.5 46 67.4
Rhsim01G0227300 Rhododendron simsii HOM05D000588 ORTHO05D004275 1.9e-08 63.5 40 80.0
Sopen06g032520 Solanum pennellii HOM05D000588 ORTHO05D004275 1.9e-08 63.5 45 66.7
THA.LOC104815792 Tarenaya hassleriana HOM05D000588 ORTHO05D004275 1.9e-08 63.5 46 67.4
MBI05_g22049_MAGBIO Magnolia biondii HOM05D000588 ORTHO05D004275 2.4e-08 63.2 46 65.2
Prupe.6G078300 Prunus persica HOM05D000588 ORTHO05D004275 2.4e-08 63.2 40 75.0
Lalb_Chr20g0114361 Lupinus albus HOM05D000588 ORTHO05D004275 3.2e-08 62.8 37 78.4
Peaxi162Scf00089g01810 Petunia axillaris HOM05D000588 ORTHO05D004275 3.2e-08 62.8 45 66.7
MSTRG.18582 Avicennia marina HOM05D000588 ORTHO05D004275 4.1e-08 62.4 45 64.4
EL10Ac7g16014 Beta vulgaris HOM05D000588 ORTHO05D004275 4.1e-08 62.4 39 76.9
Ca_02403_v3 Cicer arietinum L. HOM05D000588 ORTHO05D004275 4.1e-08 62.4 46 67.4
Migut.N02676 Erythranthe guttata HOM05D000588 ORTHO05D004275 4.1e-08 62.4 45 64.4
Os05g0459700 Oryza sativa ssp. japonica HOM05D000588 ORTHO05D004275 4.1e-08 62.4 44 63.6
Solyc03g112880.1 Solanum lycopersicum HOM05D000588 ORTHO05D004275 4.1e-08 62.4 36 80.6
Sopen03g031960 Solanum pennellii HOM05D000588 ORTHO05D004275 4.1e-08 62.4 36 80.6
PGSC0003DMG400018093 Solanum tuberosum HOM05D000588 ORTHO05D004275 4.1e-08 62.4 36 80.6
SGA_v2.0_scaffold203G41509 Striga asiatica HOM05D000588 ORTHO05D004275 4.1e-08 62.4 45 64.4
Zm00001eb289670 Zea mays HOM05D000588 ORTHO05D004275 4.1e-08 62.4 44 63.6
ECA236G3501 Erigeron canadensis HOM05D000588 ORTHO05D004275 7.0e-08 61.6 39 76.9
SalBow3G2904 Salvia bowleyana HOM05D000588 ORTHO05D004275 7.0e-08 61.6 45 66.7
AUR62001791 Chenopodium quinoa HOM05D000588 ORTHO05D004275 9.2e-08 61.2 45 64.4
AUR62009579 Chenopodium quinoa HOM05D000588 ORTHO05D004275 9.2e-08 61.2 45 64.4
Nn2g15189 Nelumbo nucifera HOM05D000588 ORTHO05D004275 9.2e-08 61.2 41 75.6
Nn3g19645 Nelumbo nucifera HOM05D000588 ORTHO05D004275 9.2e-08 61.2 46 67.4
Nitab4.5_0003753g0010 Nicotiana tabacum HOM05D000588 ORTHO05D004275 9.2e-08 61.2 45 66.7
Nitab4.5_0006166g0020 Nicotiana tabacum HOM05D000588 ORTHO05D004275 9.2e-08 61.2 45 66.7
Oeu019197.1 Olea europaea HOM05D000588 ORTHO05D004275 9.2e-08 61.2 40 75.0
Actinidia23942 Actinidia chinensis HOM05D000588 ORTHO05D004275 1.6e-07 60.5 46 65.2
DCAR_015624 Daucus carota HOM05D000588 ORTHO05D004275 1.6e-07 60.5 45 64.4
Oeu054146.1 Olea europaea HOM05D000588 ORTHO05D004275 1.6e-07 60.5 45 66.7
unitig_736.g22965 Utricularia gibba HOM05D000588 ORTHO05D004275 1.6e-07 60.5 45 66.7
Lsat_1_v5_gn_9_23341 Lactuca sativa HOM05D000588 ORTHO05D004275 2.0e-07 60.1 36 80.6
Medtr2g437700 Medicago truncatula HOM05D000588 ORTHO05D004275 2.0e-07 60.1 46 65.2
Ah.15g097240 Amaranthus hybridus HOM05D000588 ORTHO05D004275 2.7e-07 59.7 39 74.4
HanXRQChr11g0350861 Helianthus annuus HOM05D000588 ORTHO05D004275 2.7e-07 59.7 39 76.9
TWI31G1202 Tripterygium wilfordii HOM05D000588 ORTHO05D004275 3.5e-07 59.3 46 60.9
ATR0559G275 Amborella trichopoda HOM05D000588 ORTHO05D004275 6.0e-07 58.5 36 72.2
Peaxi162Scf00774g00007 Petunia axillaris HOM05D000588 ORTHO05D004275 6.0e-07 58.5 39 66.7
Psat1g151360 Pisum sativum HOM05D000588 ORTHO05D004275 6.0e-07 58.5 46 63.0
TPR.G30928 Trifolium pratense HOM05D000588 ORTHO05D004275 6.0e-07 58.5 46 60.9
Ah.08g219490 Amaranthus hybridus HOM05D000588 ORTHO05D004275 7.8e-07 58.2 52 55.8
MSTRG.21200 Avicennia marina HOM05D000588 ORTHO05D004275 7.8e-07 58.2 45 62.2
Lj2A1062T47 Lonicera japonica HOM05D000588 ORTHO05D004275 7.8e-07 58.2 37 73.0
RcHm_v2.0_Chr5g0064411 Rosa chinensis HOM05D000588 ORTHO05D004275 7.8e-07 58.2 46 58.7
CAN.G1305.32 Capsicum annuum HOM05D000588 ORTHO05D004275 1.3e-06 57.4 45 60.0
FvH4_3g36000 Fragaria vesca HOM05D000588 ORTHO05D004275 1.7e-06 57.0 46 58.7
FAN16G3196 Fragaria x ananassa HOM05D000588 ORTHO05D004275 1.7e-06 57.0 46 58.7
FAN21G1353 Fragaria x ananassa HOM05D000588 ORTHO05D004275 1.7e-06 57.0 46 58.7
FAN25G0853 Fragaria x ananassa HOM05D000588 ORTHO05D004275 1.7e-06 57.0 46 58.7
MSTRG.12648 Avicennia marina HOM05D000588 ORTHO05D004275 2.3e-06 56.6 45 60.0
Sc21g0005760 Simmondsia chinensis HOM05D000588 ORTHO05D004275 2.3e-06 56.6 39 69.2
Lj6g0012231 Lotus japonicus HOM05D000588 ORTHO05D004275 5.0e-06 55.5 40 67.5
FAN11G0300 Fragaria x ananassa HOM05D000588 ORTHO05D004275 8.6e-06 54.7 46 56.5


User provided reference genes

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