Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 4.5e-52 207.6 101 100.0
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.1e-47 193.0 101 92.1
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.4e-45 185.3 101 91.1
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 4.0e-45 184.5 103 89.3
CSS0040113 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 7.6e-44 180.3 104 86.5
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 8.5e-27 123.6 102 66.7
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 3.9e-24 114.8 101 62.4
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 2.5e-23 112.1 101 63.4
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 3.3e-23 111.7 101 61.4
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 3.3e-23 111.7 101 61.4
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 5.7e-23 110.9 94 60.6
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 8.2e-22 107.1 101 60.4
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 1.1e-21 106.7 92 66.3
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 1.5e-20 102.8 101 55.4
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 7.7e-20 100.5 106 52.8
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 2.9e-19 98.6 98 55.1
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 3.8e-19 98.2 101 53.5
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 5.0e-19 97.8 101 52.5
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 8.5e-19 97.1 95 56.8
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 1.4e-18 96.3 101 54.5
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 2.5e-18 95.5 101 56.4
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 4.2e-18 94.7 99 55.6
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 9.4e-18 93.6 98 53.1
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 3.6e-17 91.7 98 52.0
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 4.7e-17 91.3 95 53.7
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 4.7e-17 91.3 101 47.5
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 1.0e-16 90.1 103 50.5
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 1.4e-16 89.7 95 50.5
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 3.9e-16 88.2 96 49.0
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 3.9e-16 88.2 101 52.5
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 6.7e-16 87.4 98 46.9
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 6.7e-16 87.4 101 50.5
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 1.1e-15 86.7 98 49.0
SGA_v2.0_scaffold70G23461 Striga asiatica HOM05D004838 ORTHO05D005373 1.5e-15 86.3 98 49.0
QL08p037147 Quercus lobata HOM05D004838 ORTHO05D005373 2.0e-15 85.9 89 51.7
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 5.7e-15 84.3 98 45.9
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 9.7e-15 83.6 94 51.1
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 9.7e-15 83.6 99 53.5
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 1.3e-14 83.2 102 48.0
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 2.2e-14 82.4 101 52.5
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 4.8e-14 81.3 98 49.0
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 6.3e-14 80.9 97 48.5
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 1.1e-13 80.1 98 46.9
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 2.4e-13 79.0 101 47.5
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 5.3e-13 77.8 98 48.0
ECA246G0551 Erigeron canadensis HOM05D004838 ORTHO05D005373 5.3e-13 77.8 92 51.1
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 1.2e-12 76.6 89 48.3
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 1.6e-12 76.3 98 48.0
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 2.6e-12 75.5 98 50.0
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 2.6e-12 75.5 98 50.0
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 2.6e-12 75.5 99 44.4
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 4.5e-12 74.7 98 50.0
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 4.5e-12 74.7 95 46.3
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 5.9e-12 74.3 98 43.9
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 5.9e-12 74.3 99 49.5
Sed0001014 Sechium edule HOM05D004838 ORTHO05D005373 5.9e-12 74.3 98 50.0
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 7.7e-12 73.9 99 49.5
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 1.0e-11 73.6 95 48.4
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 1.3e-11 73.2 98 46.9
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 2.2e-11 72.4 98 45.9
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 2.2e-11 72.4 99 45.5
Actinidia08019 Actinidia chinensis HOM05D004838 ORTHO05D005373 2.9e-11 72.0 100 48.0
MD09G1096600 Malus domestica HOM05D004838 ORTHO05D005373 2.9e-11 72.0 89 49.4
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 2.9e-11 72.0 101 40.6
ECA246G2857 Erigeron canadensis HOM05D004838 ORTHO05D005373 6.5e-11 70.9 103 47.6
Gohir.A01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 8.5e-11 70.5 99 47.5
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 1.5e-10 69.7 98 48.0
ECA246G0483 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.9e-10 69.3 92 45.7
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 1.9e-10 69.3 98 40.8
TWI36G0547 Tripterygium wilfordii HOM05D004838 ORTHO05D005373 1.9e-10 69.3 98 42.9
Gorai.002G017000 Gossypium raimondii HOM05D004838 ORTHO05D005373 2.5e-10 68.9 99 47.5
ECA246G1879 Erigeron canadensis HOM05D000214 ORTHO05D000131 4.2e-10 68.2 89 49.4
MBI18_g19832_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 9.4e-10 67.0 101 42.6
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 9.4e-10 67.0 98 38.8
TPR.G27093 Trifolium pratense HOM05D004838 ORTHO05D005373 1.6e-09 66.2 98 38.8
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 2.7e-09 65.5 98 38.8
Manes.12G082700 Manihot esculenta HOM05D004838 ORTHO05D005373 2.7e-09 65.5 95 43.2
Potri.013G147700 Populus trichocarpa HOM05D004838 ORTHO05D005373 6.1e-09 64.3 99 47.5
Cpa.g.sc34.87 Carica papaya HOM05D004838 ORTHO05D005373 8.0e-09 63.9 100 45.0
CDE02G2086 Ceratophyllum demersum HOM05D001554 ORTHO05D001481 1.0e-08 63.5 101 40.6
Migut.H01015 Erythranthe guttata HOM05D004838 ORTHO05D005373 1.4e-08 63.2 98 43.9
Psat5g269640 Pisum sativum HOM05D004838 ORTHO05D005373 1.8e-08 62.8 98 35.7
MBI18_g27682_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 2.3e-08 62.4 101 40.6
Potri.019G116300 Populus trichocarpa HOM05D004838 ORTHO05D005373 4.0e-08 61.6 98 43.9
Medtr2g090010 Medicago truncatula HOM05D004838 ORTHO05D005373 5.2e-08 61.2 98 39.8
CDE10G0022 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 1.1e-07 60.1 93 36.6
Lsat_1_v5_gn_3_40361 Lactuca sativa HOM05D004838 ORTHO05D005373 1.5e-07 59.7 97 39.2
TAR627G0102 Trochodendron aralioides HOM05D004838 ORTHO05D005373 2.0e-07 59.3 79 43.0
Solyc12g005600.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 3.3e-07 58.5 98 43.9
ATR0852G001 Amborella trichopoda HOM05D004838 ORTHO05D005373 4.4e-07 58.2 93 39.8
Sabra19G0117300 Salix brachista HOM05D004838 ORTHO05D005373 5.7e-07 57.8 98 41.8
Sabra19G0136400 Salix brachista HOM05D004838 ORTHO05D005373 5.7e-07 57.8 98 41.8
Medtr2g090015 Medicago truncatula HOM05D004838 ORTHO05D005373 7.5e-07 57.4 98 36.7
RcHm_v2.0_Chr2g0161551 Rosa chinensis HOM05D004838 ORTHO05D005373 7.5e-07 57.4 95 38.9
FAN02G3359 Fragaria x ananassa HOM05D004838 ORTHO05D005373 9.7e-07 57.0 96 41.7
Sc21g0002490 Simmondsia chinensis HOM05D004838 ORTHO05D005373 9.7e-07 57.0 99 37.4
Carub.0007s1252 Capsella rubella HOM05D004838 ORTHO05D005373 1.7e-06 56.2 102 38.2
Nn2g11248 Nelumbo nucifera HOM05D004838 ORTHO05D005373 2.2e-06 55.8 98 33.7
AL7G24360 Arabidopsis lyrata HOM05D004838 ORTHO05D005373 2.8e-06 55.5 101 38.6
AT4G28240 Arabidopsis thaliana HOM05D004838 ORTHO05D005373 2.8e-06 55.5 101 38.6
Migut.H01016 Erythranthe guttata HOM05D004838 ORTHO05D005373 2.8e-06 55.5 97 42.3
Nitab4.5_0005244g0070 Nicotiana tabacum HOM05D004838 ORTHO05D005373 2.8e-06 55.5 91 44.0
ECA246G1803 Erigeron canadensis HOM05D004838 ORTHO05D005373 3.7e-06 55.1 100 35.0
Sabra13G0119300 Salix brachista HOM05D004838 ORTHO05D005373 3.7e-06 55.1 96 43.8
FAN05G2643 Fragaria x ananassa HOM05D004838 ORTHO05D005373 4.8e-06 54.7 96 40.6
QL05p081093 Quercus lobata HOM05D004838 ORTHO05D005373 6.3e-06 54.3 100 36.0
Thecc.02G170800 Theobroma cacao HOM05D000831 ORTHO05D000660 6.3e-06 54.3 108 35.2


User provided reference genes

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