Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 0.0e+00 1243.8 847 100.0
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 1.6e-296 1022.7 879 72.2
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 1.3e-293 1013.1 837 72.6
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 2.5e-289 998.8 847 74.3
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 1.6e-272 943.0 850 66.1
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 8.9e-271 937.2 839 70.2
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 7.1e-268 927.5 834 66.8
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 4.3e-265 918.3 842 66.5
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 5.6e-265 917.9 840 67.3
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 5.6e-265 917.9 841 63.4
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 2.4e-263 912.5 836 69.1
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 4.0e-263 911.8 835 61.8
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 2.6e-262 909.1 844 66.2
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 3.4e-262 908.7 812 66.7
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.7e-261 906.4 835 71.9
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.2e-261 906.0 840 67.5
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 3.8e-261 905.2 840 67.3
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.9e-260 902.9 838 67.2
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 2.4e-260 902.5 851 65.6
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 4.2e-260 901.7 843 64.7
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 4.2e-260 901.7 823 67.0
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 4.2e-260 901.7 843 69.4
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 1.6e-259 899.8 837 65.6
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.6e-259 899.8 823 66.0
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 3.5e-259 898.7 841 62.9
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 1.0e-258 897.1 839 71.4
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 1.1e-257 893.6 835 65.5
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 5.6e-257 891.3 858 64.1
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 9.6e-257 890.6 840 66.0
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.1e-255 887.1 842 63.2
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 3.1e-255 885.6 844 63.5
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 4.0e-255 885.2 866 64.8
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 4.0e-255 885.2 834 66.3
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 4.0e-255 885.2 834 66.2
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 1.2e-254 883.6 843 69.6
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 1.5e-254 883.2 834 60.8
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.3e-253 880.2 844 64.1
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.4e-252 876.7 829 63.9
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.4e-252 876.7 837 69.2
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 7.1e-252 874.4 847 65.6
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 9.3e-252 874.0 833 66.1
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 7.9e-251 870.9 837 67.9
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 1.3e-250 870.2 840 61.2
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 2.3e-250 869.4 843 66.2
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 6.7e-250 867.8 837 67.1
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.5e-249 866.7 838 65.9
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 1.3e-248 863.6 857 59.6
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 4.8e-248 861.7 846 61.9
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 8.1e-248 860.9 836 66.0
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 8.1e-248 860.9 838 62.1
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.4e-247 860.1 838 60.0
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 3.4e-246 855.5 831 59.7
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 4.5e-246 855.1 836 69.6
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 9.9e-246 854.0 843 65.6
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 3.8e-245 852.0 846 60.4
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 3.8e-245 852.0 841 62.8
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 7.1e-244 847.8 844 63.9
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 2.1e-243 846.3 840 62.3
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 4.6e-243 845.1 843 58.2
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 6.0e-243 844.7 842 63.8
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 1.1e-241 840.5 841 69.7
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.0e-239 832.0 840 59.3
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 5.3e-239 831.6 840 58.7
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 1.2e-238 830.5 812 65.9
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 1.5e-238 830.1 837 58.3
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 2.6e-238 829.3 841 63.1
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 4.5e-238 828.6 847 58.3
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 5.8e-238 828.2 842 56.8
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 1.7e-237 826.6 789 65.9
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 2.9e-237 825.9 831 59.2
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 6.5e-237 824.7 866 57.6
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 3.2e-236 822.4 840 60.5
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.3e-234 817.0 813 66.4
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 4.8e-232 808.5 847 57.3
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 3.1e-231 805.8 842 57.0
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 5.3e-231 805.1 843 62.5
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 1.2e-230 803.9 835 57.2
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.5e-230 803.5 839 57.2
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.8e-224 782.7 890 59.0
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 6.9e-223 778.1 704 74.3
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 9.1e-223 777.7 790 58.5
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 3.4e-222 775.8 850 56.7
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 2.9e-221 772.7 834 59.4
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 5.5e-220 768.5 836 56.2
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.5e-212 741.9 833 53.8
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.1e-207 727.6 842 55.9
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.6e-206 723.8 844 59.2
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 1.5e-201 707.2 845 58.2
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 1.3e-200 704.1 842 56.9
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 3.1e-199 699.5 850 57.6
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 2.0e-198 696.8 845 58.1
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 5.9e-198 695.3 845 56.1
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 2.2e-197 693.3 845 58.0
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 5.0e-197 692.2 869 48.7
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.5e-196 690.6 847 59.1
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 1.3e-192 677.6 849 55.9
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 8.3e-192 674.9 848 54.4
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 8.3e-192 674.9 679 63.3
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.3e-189 666.8 813 51.0
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 4.4e-185 652.5 850 48.5
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.3e-181 641.0 920 52.9
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.1e-180 637.9 837 52.0
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 8.9e-178 628.2 844 49.6
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 9.8e-169 598.2 830 44.7
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 3.7e-168 596.3 830 44.6
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.4e-167 594.3 841 50.7
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.4e-167 593.6 830 44.6
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 3.9e-165 586.3 851 44.4
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 2.1e-158 563.9 440 68.0
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 7.8e-158 562.0 881 42.5
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 2.3e-157 560.5 545 67.0
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 5.1e-157 559.3 790 44.8
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.7e-149 534.3 477 71.9
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 4.3e-148 529.6 655 62.9
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 1.2e-142 511.5 489 72.6
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 8.7e-141 505.4 715 52.0
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 5.8e-137 492.7 665 49.0
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 6.2e-131 472.6 882 49.0
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 7.1e-127 459.1 770 45.3
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 6.9e-122 442.6 543 49.7
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 1.2e-118 431.8 585 58.3
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 4.3e-116 423.3 869 39.7
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 3.7e-115 420.2 349 63.9
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.1e-114 417.2 548 54.2
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 2.9e-112 410.6 324 67.3
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 2.1e-110 404.4 463 60.7
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.3e-99 368.6 248 74.2
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 1.3e-96 358.6 536 42.4
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 4.8e-91 340.1 456 43.6
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 4.8e-91 340.1 519 40.3
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 1.2e-89 335.5 831 39.7
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.9e-88 330.9 509 48.1
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 3.0e-85 320.9 795 37.7
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 2.8e-83 314.3 876 39.2
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 2.8e-83 314.3 447 45.2
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 7.2e-71 273.1 178 84.3
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 5.4e-58 230.3 340 59.4
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 5.4e-58 230.3 419 59.2
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 9.2e-58 229.6 507 31.6
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 7.8e-57 226.5 373 52.3
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.9e-47 195.3 410 36.3
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 1.9e-42 178.7 138 62.3
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 1.0e-40 172.9 144 66.0
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.5e-39 168.3 350 36.3
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.7e-38 164.1 329 37.7
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.6e-36 158.3 141 64.5
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 2.3e-32 145.2 137 55.5
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.9e-29 133.7 142 53.5
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 1.3e-24 119.4 109 56.0
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 4.3e-23 114.4 93 60.2
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.6e-23 114.0 122 53.3
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.3e-23 113.6 77 71.4
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.4e-21 109.4 219 39.3
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.2e-19 102.1 77 64.9
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 4.9e-19 100.9 102 54.9
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.1e-18 99.8 84 58.3
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-18 99.8 314 29.3
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.9e-18 99.0 80 63.8
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.5e-18 97.4 165 41.8
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 7.1e-18 97.1 80 60.0
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.1e-16 90.9 79 63.3
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.6e-15 87.4 395 27.8
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.1e-14 85.5 80 53.8
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.2e-14 84.0 104 49.0
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.0e-13 81.3 164 37.8
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 1.2e-12 79.7 106 48.1
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.8e-12 77.4 72 54.2
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 2.2e-11 75.5 140 39.3
HPP92_006544 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.9e-10 72.4 174 36.2
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 2.1e-09 68.9 57 68.4
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.0e-08 66.6 64 53.1
HPP92_006873 Vanilla planifolia HOM05D000450 ORTHO05D002608 1.3e-08 66.2 166 36.7
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 3.9e-08 64.7 45 62.2
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 5.1e-08 64.3 82 51.2
HPP92_028492 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.1e-08 64.3 138 35.5
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 6.7e-08 63.9 46 60.9
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 8.7e-08 63.5 57 57.9
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 1.9e-07 62.4 51 64.7
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 1.9e-07 62.4 41 73.2
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 3.3e-07 61.6 55 58.2
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 1.3e-06 59.7 55 54.5
HPP92_028374 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.1e-06 58.9 105 37.1
HPP92_028506 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.8e-06 58.5 38 76.3
BcaB08g34419 Brassica carinata HOM05D003551 ORTHO05D004869 8.2e-06 57.0 53 62.3


User provided reference genes

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