Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025438 Camellia sinensis var. sinensis HOM05D005301 ORTHO05D006433 3.3e-143 511.9 305 100.0
Actinidia16194 Actinidia chinensis HOM05D005301 ORTHO05D006433 1.6e-113 413.3 286 87.8
Dinv11108 Davidia involucrata HOM05D005301 ORTHO05D006433 3.0e-112 409.1 306 82.4
vmacro19243 Vaccinium macrocarpon HOM05D005301 ORTHO05D006433 1.8e-104 383.3 306 69.9
Ciclev10019136m.g Citrus clementina HOM05D005301 ORTHO05D006433 3.2e-101 372.5 302 77.2
CiPaw.11G012400 Carya illinoinensis HOM05D005301 ORTHO05D006433 9.2e-101 370.9 292 79.1
Nitab4.5_0003282g0130 Nicotiana tabacum HOM05D005301 ORTHO05D006433 1.2e-100 370.5 306 72.5
Nitab4.5_0010042g0030 Nicotiana tabacum HOM05D005301 ORTHO05D006433 1.3e-99 367.1 307 73.6
Rhsim08G0184700 Rhododendron simsii HOM05D005301 ORTHO05D006433 3.0e-99 365.9 292 69.5
GSVIVG01007548001 Vitis vinifera HOM05D005301 ORTHO05D006433 4.3e-98 362.1 300 77.3
Potri.015G090100 Populus trichocarpa HOM05D005301 ORTHO05D006433 8.1e-97 357.8 297 78.1
PGSC0003DMG400015238 Solanum tuberosum HOM05D005301 ORTHO05D006433 8.1e-97 357.8 306 71.2
Gohir.A12G188000 Gossypium hirsutum HOM05D005301 ORTHO05D006433 4.0e-96 355.5 295 75.9
TAR374G1436 Trochodendron aralioides HOM05D005301 ORTHO05D006433 4.0e-96 355.5 299 74.9
Gohir.D12G190800 Gossypium hirsutum HOM05D005301 ORTHO05D006433 4.4e-95 352.1 293 73.7
Lj9A475G62 Lonicera japonica HOM05D005301 ORTHO05D006433 5.8e-95 351.7 290 67.2
QL10p005311 Quercus lobata HOM05D005301 ORTHO05D006433 1.3e-94 350.5 301 74.1
Gorai.008G204700 Gossypium raimondii HOM05D005301 ORTHO05D006433 1.7e-94 350.1 295 74.6
Sabra15G0112300 Salix brachista HOM05D005301 ORTHO05D006433 2.2e-94 349.7 301 76.1
Oeu011576.1 Olea europaea HOM05D005301 ORTHO05D006433 1.9e-93 346.7 295 68.1
Glyma.04G192600 Glycine max HOM05D005301 ORTHO05D006433 3.2e-93 345.9 286 75.9
Lalb_Chr11g0069731 Lupinus albus HOM05D005301 ORTHO05D006433 4.1e-93 345.5 298 73.5
CAN.G352.5 Capsicum annuum HOM05D005301 ORTHO05D006433 9.2e-93 344.4 291 70.1
Sopen03g030520 Solanum pennellii HOM05D005301 ORTHO05D006433 1.2e-92 344.0 289 72.0
Phvul.009G169100 Phaseolus vulgaris HOM05D005301 ORTHO05D006433 6.0e-92 341.7 283 75.3
MD06G1157400 Malus domestica HOM05D005301 ORTHO05D006433 7.8e-92 341.3 299 71.2
HanXRQChr09g0272861 Helianthus annuus HOM05D005301 ORTHO05D006433 1.0e-91 340.9 298 72.8
VMungo1309G2118 Vigna mungo HOM05D005301 ORTHO05D006433 1.0e-91 340.9 280 76.1
Solyc03g111390.4 Solanum lycopersicum HOM05D005301 ORTHO05D006433 1.3e-91 340.5 289 71.3
arahy.Tifrunner.gnm1.ann1.86E75A Arachis hypogaea HOM05D005301 ORTHO05D006433 2.3e-91 339.7 298 71.5
Duzib205G0739 Durio zibethinus HOM05D005301 ORTHO05D006433 2.3e-91 339.7 304 72.7
Aqoxy5G03589 Aquilegia oxysepala HOM05D005301 ORTHO05D006433 3.9e-91 339.0 295 74.6
Cfa018895 Carpinus fangiana HOM05D005301 ORTHO05D006433 3.9e-91 339.0 302 62.9
Lj1g0016804 Lotus japonicus HOM05D005301 ORTHO05D006433 3.9e-91 339.0 311 70.1
arahy.Tifrunner.gnm1.ann1.11HRG0 Arachis hypogaea HOM05D005301 ORTHO05D006433 5.1e-91 338.6 298 71.5
Haze_07279 Corylus avellana HOM05D005301 ORTHO05D006433 6.6e-91 338.2 302 63.2
Prupe.5G157400 Prunus persica HOM05D005301 ORTHO05D006433 1.1e-90 337.4 291 73.9
PGR083G1269 Punica granatum HOM05D005301 ORTHO05D006433 1.1e-90 337.4 299 70.9
Glyma.06G173200 Glycine max HOM05D005301 ORTHO05D006433 4.3e-90 335.5 303 71.3
Eucgr.B00150 Eucalyptus grandis HOM05D005301 ORTHO05D006433 7.3e-90 334.7 296 73.0
Eucgr.L01339 Eucalyptus grandis HOM05D005301 ORTHO05D006433 1.2e-89 334.0 296 73.0
Manes.06G114900 Manihot esculenta HOM05D005301 ORTHO05D006433 1.2e-89 334.0 301 73.1
Nn4g22465 Nelumbo nucifera HOM05D005301 ORTHO05D006433 2.8e-89 332.8 285 71.6
CsaV3_1G000790 Cucumis sativus L. HOM05D005301 ORTHO05D006433 4.7e-89 332.0 290 71.0
MELO3C026231.2 Cucumis melo HOM05D005301 ORTHO05D006433 6.2e-89 331.6 290 70.7
DCAR_016415 Daucus carota HOM05D005301 ORTHO05D006433 6.2e-89 331.6 298 62.4
Lsat_1_v5_gn_4_78900 Lactuca sativa HOM05D005301 ORTHO05D006433 1.1e-88 330.9 315 68.3
FvH4_5g07300 Fragaria vesca HOM05D005301 ORTHO05D006433 1.4e-88 330.5 292 73.3
FAN18G2536 Fragaria x ananassa HOM05D005301 ORTHO05D006433 1.4e-88 330.5 292 73.3
MBI06_g32519_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 2.3e-88 329.7 272 73.2
Cc04_g10470 Coffea canephora HOM05D005301 ORTHO05D006433 3.1e-88 329.3 281 75.1
Migut.I00257 Erythranthe guttata HOM05D005301 ORTHO05D006433 5.2e-88 328.6 289 69.9
TWI39G1189 Tripterygium wilfordii HOM05D005301 ORTHO05D006433 5.2e-88 328.6 294 71.8
Psat6g217880 Pisum sativum HOM05D005301 ORTHO05D006433 8.9e-88 327.8 296 70.6
CANSAT80G2324 Cannabis sativa HOM05D005301 ORTHO05D006433 1.2e-87 327.4 291 70.4
FAN04G2720 Fragaria x ananassa HOM05D005301 ORTHO05D006433 1.2e-87 327.4 292 72.3
Sc22g0004050 Simmondsia chinensis HOM05D005301 ORTHO05D006433 4.4e-87 325.5 303 64.7
Medtr1g107265 Medicago truncatula HOM05D005301 ORTHO05D006433 7.6e-87 324.7 325 65.5
TPR.G3295 Trifolium pratense HOM05D005301 ORTHO05D006433 1.7e-86 323.6 293 69.3
FAN13G0064 Fragaria x ananassa HOM05D005301 ORTHO05D006433 3.8e-86 322.4 297 69.0
RcHm_v2.0_Chr7g0191331 Rosa chinensis HOM05D005301 ORTHO05D006433 3.8e-86 322.4 292 72.6
SalBow4G2023 Salvia bowleyana HOM05D005301 ORTHO05D006433 4.9e-86 322.0 281 70.1
ECA232G2312 Erigeron canadensis HOM05D005301 ORTHO05D006433 6.4e-86 321.6 297 70.7
SGA_v2.0_scaffold102G29851 Striga asiatica HOM05D005301 ORTHO05D006433 6.4e-86 321.6 246 78.9
MD14G1164000 Malus domestica HOM05D005301 ORTHO05D006433 1.1e-85 320.9 316 67.4
THA.LOC104825004 Tarenaya hassleriana HOM05D005301 ORTHO05D006433 1.9e-85 320.1 294 71.8
AL8G24360 Arabidopsis lyrata HOM05D005301 ORTHO05D006433 3.2e-85 319.3 301 69.4
Sed0013046 Sechium edule HOM05D005301 ORTHO05D006433 3.2e-85 319.3 297 69.0
CARHR258240 Cardamine hirsuta HOM05D005301 ORTHO05D006433 4.1e-85 318.9 276 75.0
Carub.0008s1035 Capsella rubella HOM05D005301 ORTHO05D006433 5.4e-85 318.5 301 69.8
BcaB01g02903 Brassica carinata HOM05D005301 ORTHO05D006433 2.1e-84 316.6 279 70.6
AT5G50310 Arabidopsis thaliana HOM05D005301 ORTHO05D006433 7.8e-84 314.7 301 69.4
BolC3t15670H Brassica oleracea HOM05D005301 ORTHO05D006433 1.7e-83 313.5 281 71.5
Ca_16092_v3 Cicer arietinum L. HOM05D005301 ORTHO05D006433 5.1e-83 312.0 292 59.2
Sp6g12390 Schrenkiella parvula HOM05D005301 ORTHO05D006433 5.1e-83 312.0 299 68.9
C03p33480 Brassica napus HOM05D005301 ORTHO05D006433 2.1e-81 306.6 299 66.6
BcaC01g04820 Brassica carinata HOM05D005301 ORTHO05D006433 6.2e-81 305.1 299 66.2
Aa31LG3G5920 Aethionema arabicum HOM05D005301 ORTHO05D006433 8.1e-81 304.7 302 66.9
BraA03t11987Z Brassica rapa HOM05D005301 ORTHO05D006433 1.1e-80 304.3 299 65.9
ClCG06G017670 Citrullus lanatus HOM05D005301 ORTHO05D006433 1.8e-80 303.5 290 59.0
Thhalv10012907m.g Eutrema salsugineum HOM05D005301 ORTHO05D006433 1.8e-80 303.5 317 67.5
FAN08G2537 Fragaria x ananassa HOM05D005301 ORTHO05D006433 4.0e-80 302.4 292 59.6
unitig_899.g15425 Utricularia gibba HOM05D005301 ORTHO05D006433 4.0e-80 302.4 274 65.7
A03p27760 Brassica napus HOM05D005301 ORTHO05D006433 6.9e-80 301.6 299 65.9
PSO782G4848 Papaver somniferum HOM05D005301 ORTHO05D006433 6.9e-80 301.6 287 67.6
PSO063G0990 Papaver somniferum HOM05D005301 ORTHO05D006433 1.3e-78 297.4 281 68.7
EL10Ac7g18070 Beta vulgaris HOM05D005301 ORTHO05D006433 3.8e-78 295.8 307 62.9
Cpa.g.sc52.36 Carica papaya HOM05D005301 ORTHO05D006433 1.1e-77 294.3 222 82.4
Hund05643 Selenicereus undatus HOM05D005301 ORTHO05D006433 1.4e-77 293.9 305 64.3
Peaxi162Scf00089g00721 Petunia axillaris HOM05D005301 ORTHO05D006433 9.3e-77 291.2 240 74.6
COL.COLO4_09264 Corchorus olitorius HOM05D005301 ORTHO05D006433 2.3e-75 286.6 265 60.4
CDE02G1357 Ceratophyllum demersum HOM05D005301 ORTHO05D006433 3.9e-75 285.8 217 73.7
Os04g0483600 Oryza sativa ssp. japonica HOM05D005301 ORTHO05D006433 8.7e-75 284.6 277 66.8
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 1.1e-74 284.3 310 62.9
Ah.08g218140 Amaranthus hybridus HOM05D005301 ORTHO05D006433 4.8e-73 278.9 267 65.2
Zm00001eb079290 Zea mays HOM05D005301 ORTHO05D006433 5.3e-72 275.4 318 62.9
SEGI_14135 Sequoiadendron giganteum HOM05D005301 ORTHO05D006433 9.9e-71 271.2 293 62.1
AUR62001274 Chenopodium quinoa HOM05D005301 ORTHO05D006433 2.9e-70 269.6 277 55.2
MBI06_g16660_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 8.7e-67 258.1 249 64.7
SMO339G0058 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 5.5e-61 238.8 242 51.7
AagrBONN_evm.TU.Sc2ySwM_344.1825 Anthoceros agrestis HOM05D005301 ORTHO05D006433 3.5e-60 236.1 253 60.9
Pp3c16_5780 Physcomitrium patens HOM05D005301 ORTHO05D006433 1.6e-57 227.3 303 55.4
BcaC01g04819 Brassica carinata HOM05D005301 ORTHO05D006433 2.1e-57 226.9 273 49.5
Atru.chr9.1005 Acer truncatum HOM05D005301 ORTHO05D006433 6.2e-57 225.3 221 70.6
Thecc.03G122400 Theobroma cacao HOM05D005301 ORTHO05D006433 1.4e-56 224.2 213 64.8
Mapoly0001s0540 Marchantia polymorpha HOM05D005301 ORTHO05D006433 1.0e-54 218.0 272 56.2
Hund05630 Selenicereus undatus HOM05D005301 ORTHO05D006433 1.3e-49 201.1 247 58.7
CBR_g40809 Chara braunii HOM05D005301 ORTHO05D006433 4.1e-48 196.1 269 50.9
AUR62025732 Chenopodium quinoa HOM05D005301 ORTHO05D006433 1.6e-44 184.1 254 44.9
HPP92_004591 Vanilla planifolia HOM05D005301 ORTHO05D006433 2.6e-39 166.8 234 56.0
SMO307G0058 Selaginella moellendorffii HOM05D003015 ORTHO05D003733 3.7e-33 146.4 246 36.6
HPP92_004592 Vanilla planifolia HOM05D004180 ORTHO05D005323 1.9e-29 134.0 90 77.8
SMO200G0253 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.1e-28 129.0 215 39.5
Lsat_1_v5_gn_9_521 Lactuca sativa HOM05D005301 ORTHO05D006433 6.7e-27 125.6 70 84.3
Lsat_1_v5_gn_2_63001 Lactuca sativa HOM05D005301 ORTHO05D006433 4.4e-26 122.9 70 82.9
Actinidia19384 Actinidia chinensis HOM05D005301 ORTHO05D006433 3.5e-23 113.2 131 73.3
SMO089G0014 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.5e-22 109.0 182 39.0
SMO024G0003 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 9.4e-21 105.1 217 35.0
SMO200G0172 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 2.7e-20 103.6 239 33.1
Peaxi162Scf00089g00716 Petunia axillaris HOM05D005301 ORTHO05D006433 5.7e-18 95.9 59 86.4
SMO200G0119 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 9.1e-16 88.6 157 36.3
SMO001G0006 Selaginella moellendorffii HOM05D003015 ORTHO05D003733 1.6e-07 61.2 297 26.9


User provided reference genes

Program Settings