Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 7.9e-208 726.9 364 100.0
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 7.0e-156 554.3 342 79.2
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 8.9e-151 537.3 344 74.4
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 1.8e-143 513.1 344 72.4
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 1.5e-142 510.0 333 73.9
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 3.2e-140 502.3 336 70.5
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 3.5e-139 498.8 332 70.8
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 4.6e-139 498.4 347 72.3
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 1.0e-138 497.3 345 69.9
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 2.3e-138 496.1 335 71.3
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 3.0e-138 495.7 344 69.8
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 5.0e-138 495.0 339 67.6
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 6.6e-138 494.6 344 70.1
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 8.6e-138 494.2 335 71.6
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 1.1e-137 493.8 342 70.8
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 1.5e-137 493.4 344 69.5
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 1.5e-137 493.4 335 71.0
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 2.5e-137 492.7 336 67.6
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 5.6e-137 491.5 339 67.3
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 7.3e-137 491.1 334 69.2
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 9.5e-137 490.7 340 67.4
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 2.1e-136 489.6 334 68.3
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 2.8e-136 489.2 338 67.8
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 4.7e-136 488.4 334 69.2
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 6.2e-136 488.0 338 66.9
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 8.0e-136 487.6 335 67.8
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 8.0e-136 487.6 342 69.3
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 8.0e-136 487.6 342 68.1
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 1.4e-135 486.9 338 67.5
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 2.3e-135 486.1 337 66.2
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 2.3e-135 486.1 344 69.5
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 8.9e-135 484.2 344 68.3
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.2e-134 483.8 342 67.8
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 1.5e-134 483.4 348 66.7
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.5e-134 483.4 342 67.5
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 2.6e-134 482.6 337 65.9
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 7.5e-134 481.1 343 68.2
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 9.8e-134 480.7 342 68.1
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 9.8e-134 480.7 347 67.4
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 1.3e-133 480.3 338 69.8
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 1.7e-133 479.9 346 67.6
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 3.7e-133 478.8 344 66.6
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 4.9e-133 478.4 336 68.8
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 6.4e-133 478.0 335 68.4
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 8.3e-133 477.6 335 65.7
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 8.3e-133 477.6 346 66.8
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 1.1e-132 477.2 335 69.0
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 1.1e-132 477.2 340 68.2
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 1.4e-132 476.9 338 67.8
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 1.9e-132 476.5 347 67.4
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 2.4e-132 476.1 335 67.2
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 5.4e-132 474.9 339 65.5
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 7.0e-132 474.6 340 68.2
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 1.2e-131 473.8 340 68.2
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 1.2e-131 473.8 345 66.7
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 1.6e-131 473.4 340 66.8
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 1.6e-131 473.4 344 67.4
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 2.1e-131 473.0 341 66.6
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.7e-130 469.9 339 67.3
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 3.0e-130 469.2 329 69.6
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 3.0e-130 469.2 345 66.7
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 6.6e-130 468.0 343 66.5
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.6e-130 468.0 329 69.3
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 8.6e-130 467.6 333 67.6
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.1e-129 467.2 338 67.8
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 3.3e-129 465.7 341 66.3
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.2e-128 463.8 338 67.5
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 1.2e-128 463.8 338 65.1
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 2.8e-128 462.6 344 65.7
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 6.2e-128 461.5 341 64.8
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.8e-127 459.9 338 67.5
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.8e-127 459.9 329 68.1
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 3.1e-127 459.1 344 64.8
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 4.0e-127 458.8 372 61.3
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 5.2e-127 458.4 342 66.7
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 8.9e-127 457.6 341 63.3
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 1.2e-126 457.2 335 63.6
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 1.5e-126 456.8 335 66.3
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 1.5e-126 456.8 341 63.3
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 1.5e-126 456.8 339 64.9
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.5e-126 456.8 345 67.0
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.6e-126 456.1 341 63.0
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 3.4e-126 455.7 342 63.5
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 4.4e-126 455.3 335 63.6
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 9.9e-126 454.1 391 59.1
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 1.3e-125 453.8 341 66.6
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 3.7e-125 452.2 333 64.6
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 5.4e-124 448.4 332 65.1
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 7.1e-124 448.0 337 63.8
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 6.0e-123 444.9 380 59.5
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 1.3e-122 443.7 291 77.0
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 5.8e-118 428.3 344 59.9
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 2.2e-117 426.4 334 61.7
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 6.4e-117 424.9 349 60.2
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 1.2e-115 420.6 344 57.8
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 5.6e-113 411.8 337 59.6
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 2.1e-112 409.8 337 57.9
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 3.1e-111 406.0 349 61.0
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 2.9e-109 399.4 343 55.4
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 4.2e-108 395.6 432 48.6
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 4.2e-108 395.6 343 56.0
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 3.5e-107 392.5 262 70.2
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 6.2e-104 381.7 337 56.7
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 1.8e-103 380.2 330 55.2
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 9.0e-103 377.9 348 58.3
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 5.1e-98 362.1 334 52.7
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.0e-90 337.8 295 56.9
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 1.1e-89 334.3 255 63.5
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 1.5e-89 334.0 256 63.3
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 8.2e-88 328.2 229 65.9
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.1e-83 313.5 185 80.0
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 4.6e-83 312.4 183 80.9
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 3.6e-75 286.2 348 43.4
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 4.2e-68 262.7 338 39.9
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.8e-66 257.3 338 41.4
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.9e-66 256.1 201 65.7
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 1.5e-57 227.6 182 64.8
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.0e-50 203.4 195 56.4
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 5.2e-50 202.6 168 64.3
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.1e-47 193.4 183 56.8
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 7.2e-44 182.2 181 55.2
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 1.6e-43 181.0 255 38.8
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 8.8e-42 175.3 203 48.8
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 1.4e-26 124.8 81 70.4
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.9e-23 114.4 159 36.5
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.2e-19 99.4 136 44.9
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.8e-18 97.8 58 77.6
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.8e-18 97.8 58 77.6
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.8e-18 97.8 58 77.6
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 1.2e-17 95.1 168 35.1
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 1.5e-17 94.7 58 75.9
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 1.5e-17 94.7 72 66.7
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 5.8e-17 92.8 72 65.3
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.3e-16 91.7 72 65.3
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 9.2e-15 85.5 56 73.2
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 4.6e-14 83.2 51 74.5
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 4.6e-14 83.2 51 74.5
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 1.8e-10 71.2 60 51.7
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 5.2e-10 69.7 67 53.7
FAN19G1473 Fragaria x ananassa HOM05D000005 ORTHO05D000294 6.4e-08 62.8 83 44.6
SHI23126 Sapria himalayana HOM05D006263 ORTHO05D007549 6.0e-06 56.2 47 53.2


User provided reference genes

Program Settings