Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.6e-58 229.2 112 100.0
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.6e-58 229.2 112 100.0
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 1.7e-44 182.6 100 85.0
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 3.8e-44 181.4 100 84.0
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 5.0e-44 181.0 98 88.8
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 8.5e-44 180.3 100 85.0
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 8.5e-44 180.3 100 86.0
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 8.5e-44 180.3 98 88.8
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 1.1e-43 179.9 98 88.8
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 1.1e-43 179.9 98 87.8
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.4e-43 179.5 100 86.0
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 1.9e-43 179.1 99 85.9
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 2.5e-43 178.7 100 83.0
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 2.5e-43 178.7 100 84.0
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 5.5e-43 177.6 98 85.7
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 7.2e-43 177.2 98 86.7
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 9.3e-43 176.8 98 86.7
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 9.3e-43 176.8 98 85.7
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 9.3e-43 176.8 98 85.7
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 9.3e-43 176.8 100 82.0
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 1.2e-42 176.4 100 83.0
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 2.1e-42 175.6 99 86.9
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 2.1e-42 175.6 98 81.6
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 2.7e-42 175.3 100 82.0
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.7e-42 175.3 100 82.0
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 4.6e-42 174.5 98 83.7
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 7.9e-42 173.7 98 85.7
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 7.9e-42 173.7 100 82.0
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 7.9e-42 173.7 98 83.7
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 1.3e-41 172.9 100 83.0
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 1.3e-41 172.9 100 81.0
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 1.3e-41 172.9 99 82.8
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 1.3e-41 172.9 98 84.7
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 1.3e-41 172.9 100 80.0
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 1.8e-41 172.6 98 84.7
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 1.8e-41 172.6 97 85.6
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 1.8e-41 172.6 97 84.5
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 2.3e-41 172.2 100 82.0
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 3.0e-41 171.8 98 83.7
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 3.0e-41 171.8 98 83.7
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 3.0e-41 171.8 98 83.7
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 3.0e-41 171.8 100 82.0
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 3.9e-41 171.4 98 84.7
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 5.1e-41 171.0 99 84.8
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 5.1e-41 171.0 100 82.0
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 6.7e-41 170.6 100 80.0
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 8.7e-41 170.2 100 80.0
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 8.7e-41 170.2 98 82.7
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 1.1e-40 169.9 100 79.0
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 1.1e-40 169.9 97 83.5
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 1.5e-40 169.5 98 81.6
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 1.5e-40 169.5 98 82.7
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 1.5e-40 169.5 100 81.0
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 1.5e-40 169.5 98 82.7
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 1.9e-40 169.1 100 82.0
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 1.9e-40 169.1 100 82.0
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 2.5e-40 168.7 100 82.0
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 2.5e-40 168.7 100 80.0
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 3.3e-40 168.3 110 75.5
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 4.3e-40 167.9 100 78.0
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 4.3e-40 167.9 98 80.6
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 4.3e-40 167.9 102 79.4
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 4.3e-40 167.9 98 81.6
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 4.3e-40 167.9 98 81.6
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 4.3e-40 167.9 98 81.6
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 4.3e-40 167.9 99 82.8
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 5.7e-40 167.5 100 80.0
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 5.7e-40 167.5 99 82.8
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 5.7e-40 167.5 100 80.0
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 7.4e-40 167.2 99 79.8
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 1.7e-39 166.0 100 78.0
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 1.7e-39 166.0 100 80.0
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.8e-39 165.2 97 78.4
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 4.8e-39 164.5 97 78.4
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 8.2e-39 163.7 96 79.2
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 8.2e-39 163.7 96 79.2
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 8.2e-39 163.7 100 76.0
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 8.2e-39 163.7 100 76.0
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 8.2e-39 163.7 100 82.0
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 1.1e-38 163.3 100 77.0
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 1.4e-38 162.9 99 79.8
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 1.4e-38 162.9 98 74.5
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 1.8e-38 162.5 101 77.2
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 2.4e-38 162.2 100 77.0
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 2.4e-38 162.2 105 78.1
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 2.4e-38 162.2 101 78.2
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 3.1e-38 161.8 101 77.2
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 3.1e-38 161.8 101 77.2
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 3.1e-38 161.8 101 77.2
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 4.1e-38 161.4 101 77.2
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 5.3e-38 161.0 101 76.2
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 5.3e-38 161.0 101 76.2
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 5.3e-38 161.0 101 76.2
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 5.3e-38 161.0 101 76.2
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 5.3e-38 161.0 101 76.2
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 5.3e-38 161.0 97 77.3
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 9.1e-38 160.2 101 76.2
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 9.1e-38 160.2 101 76.2
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 1.2e-37 159.8 103 74.8
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 1.5e-37 159.5 101 75.2
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 1.5e-37 159.5 101 75.2
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 2.0e-37 159.1 98 78.6
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 4.5e-37 157.9 101 74.3
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 4.5e-37 157.9 101 74.3
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 7.7e-37 157.1 100 78.0
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 7.7e-37 157.1 100 78.0
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 7.7e-37 157.1 112 69.6
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 7.7e-37 157.1 101 75.2
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 7.7e-37 157.1 101 75.2
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 7.7e-37 157.1 101 75.2
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 7.7e-37 157.1 101 75.2
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 7.7e-37 157.1 101 75.2
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 7.7e-37 157.1 101 75.2
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 1.0e-36 156.8 101 75.2
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 1.0e-36 156.8 120 66.7
HPP92_002836 Vanilla planifolia HOM05D001461 ORTHO05D005534 1.7e-36 156.0 97 73.2
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 1.7e-36 156.0 101 75.2
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 2.2e-36 155.6 99 77.8
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 8.5e-36 153.7 98 74.5
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 1.4e-35 152.9 148 57.4
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 1.9e-35 152.5 99 75.8
Ah.07g196880 Amaranthus hybridus HOM05D001461 ORTHO05D005534 4.2e-35 151.4 107 67.3
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 7.2e-35 150.6 98 77.6
Hund27230 Selenicereus undatus HOM05D001461 ORTHO05D005534 3.6e-34 148.3 104 69.2
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 3.0e-33 145.2 100 70.0
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 6.7e-33 144.1 101 72.3
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 2.0e-32 142.5 96 70.8
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 2.6e-32 142.1 98 65.3
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 2.6e-32 142.1 99 67.7
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 5.7e-32 141.0 98 73.5
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 1.1e-30 136.7 78 83.3
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 1.4e-30 136.3 89 77.5
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 2.3e-25 119.0 98 56.1
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 6.7e-25 117.5 97 55.7
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 4.4e-24 114.8 94 55.3
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 8.5e-20 100.5 98 46.9
QL02p032078 Quercus lobata HOM05D001461 ORTHO05D005534 1.9e-19 99.4 54 83.3
arahy.Tifrunner.gnm1.ann1.2LVS12 Arachis hypogaea HOM05D001461 ORTHO05D005534 4.2e-19 98.2 53 86.8
Zm00001eb376320 Zea mays HOM05D001461 ORTHO05D005534 4.2e-19 98.2 57 73.7
MD08G1130100 Malus domestica HOM05D001461 ORTHO05D005534 9.4e-19 97.1 86 62.8
Actinidia28489 Actinidia chinensis HOM05D001461 ORTHO05D005534 1.2e-18 96.7 53 86.8
Cfa012281 Carpinus fangiana HOM05D001461 ORTHO05D005534 1.4e-17 93.2 53 77.4
MD14G1117200 Malus domestica HOM05D001461 ORTHO05D005534 6.7e-17 90.9 51 76.5
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 9.7e-16 87.0 54 79.6
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 8.2e-15 84.0 46 87.0
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 7.0e-14 80.9 50 78.0
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.6e-13 79.7 46 80.4
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 2.0e-13 79.3 42 90.5
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 1.7e-12 76.3 45 82.2
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 2.2e-12 75.9 46 80.4
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 2.9e-12 75.5 50 74.0
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 3.8e-12 75.1 42 85.7
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 1.1e-11 73.6 42 85.7
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 1.5e-11 73.2 42 83.3
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 7.2e-11 70.9 46 76.1
Glyma.08G020100 Glycine max HOM05D001461 ORTHO05D005534 8.0e-10 67.4 52 67.3
PRCOL_00003773 Prasinoderma coloniale HOM05D001461 ORTHO05D005534 1.8e-09 66.2 119 35.3
MCO07G452 Micromonas commoda HOM05D001461 ORTHO05D005534 1.2e-08 63.5 115 33.0
Sopen07g030150 Solanum pennellii HOM05D018748 ORTHO05D009630 1.2e-08 63.5 35 85.7
MD08G1129600 Malus domestica HOM05D001461 ORTHO05D005534 3.7e-07 58.5 96 43.8


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