Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 1.5e-84 316.2 175 100.0
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 1.4e-37 160.2 141 74.5
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 7.3e-34 147.9 148 73.0
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 1.4e-32 143.7 157 62.4
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 5.2e-32 141.7 154 49.4
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 5.2e-32 141.7 148 55.4
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.5e-31 140.2 86 74.4
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.5e-31 140.2 86 74.4
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 1.5e-31 140.2 86 74.4
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 1.5e-31 140.2 144 54.2
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.0e-31 139.8 149 53.0
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 4.4e-31 138.7 83 78.3
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 9.8e-31 137.5 73 86.3
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 9.8e-31 137.5 83 77.1
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 1.3e-30 137.1 143 65.7
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 1.3e-30 137.1 81 79.0
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 2.2e-30 136.3 144 64.6
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 3.7e-30 135.6 92 69.6
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 4.9e-30 135.2 85 75.3
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 6.4e-30 134.8 84 77.4
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 6.4e-30 134.8 85 70.6
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 6.4e-30 134.8 71 83.1
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 6.4e-30 134.8 147 50.3
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 8.3e-30 134.4 83 75.9
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 8.3e-30 134.4 153 52.3
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 1.1e-29 134.0 78 80.8
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 1.1e-29 134.0 144 52.8
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 1.1e-29 134.0 63 92.1
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 1.4e-29 133.7 73 82.2
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 1.4e-29 133.7 144 50.7
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 1.9e-29 133.3 155 48.4
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 1.9e-29 133.3 144 59.0
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 2.4e-29 132.9 144 50.7
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 3.2e-29 132.5 63 87.3
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 3.2e-29 132.5 151 55.6
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 4.1e-29 132.1 85 71.8
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 4.1e-29 132.1 60 95.0
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 4.1e-29 132.1 81 75.3
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 4.1e-29 132.1 81 75.3
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 4.1e-29 132.1 83 71.1
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 7.0e-29 131.3 72 83.3
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 7.0e-29 131.3 81 71.6
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 7.0e-29 131.3 60 93.3
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 7.0e-29 131.3 61 90.2
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 1.2e-28 130.6 79 74.7
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 1.2e-28 130.6 79 72.2
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 1.6e-28 130.2 80 73.8
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 2.0e-28 129.8 77 76.6
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 2.0e-28 129.8 64 85.9
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 2.7e-28 129.4 75 80.0
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 3.5e-28 129.0 90 66.7
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 4.6e-28 128.6 155 51.0
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 4.6e-28 128.6 60 91.7
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 4.6e-28 128.6 80 72.5
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 4.6e-28 128.6 60 90.0
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 6.0e-28 128.3 144 48.6
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 7.8e-28 127.9 60 90.0
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 1.0e-27 127.5 66 80.3
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 1.3e-27 127.1 151 47.0
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 1.7e-27 126.7 78 74.4
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 1.7e-27 126.7 63 82.5
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 3.0e-27 125.9 146 50.0
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 3.0e-27 125.9 82 68.3
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 3.9e-27 125.6 68 82.4
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 3.9e-27 125.6 71 76.1
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 3.9e-27 125.6 68 79.4
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 5.0e-27 125.2 63 82.5
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 5.0e-27 125.2 81 70.4
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 8.6e-27 124.4 64 81.2
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 8.6e-27 124.4 64 81.2
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 8.6e-27 124.4 64 81.2
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 1.1e-26 124.0 80 70.0
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 1.5e-26 123.6 80 70.0
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 1.5e-26 123.6 80 70.0
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 1.5e-26 123.6 61 90.2
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 3.3e-26 122.5 81 69.1
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 4.3e-26 122.1 165 44.2
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 5.6e-26 121.7 60 85.0
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 5.6e-26 121.7 71 74.6
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 5.6e-26 121.7 71 74.6
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 7.3e-26 121.3 81 65.4
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 7.3e-26 121.3 61 80.3
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 9.5e-26 120.9 60 85.0
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 9.5e-26 120.9 60 85.0
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 9.5e-26 120.9 60 85.0
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 9.5e-26 120.9 63 79.4
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 1.2e-25 120.6 81 69.1
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 1.2e-25 120.6 63 82.5
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 2.1e-25 119.8 63 81.0
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 2.1e-25 119.8 63 81.0
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 2.8e-25 119.4 69 75.4
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 3.6e-25 119.0 145 57.2
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 3.6e-25 119.0 60 83.3
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 4.7e-25 118.6 60 83.3
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 6.2e-25 118.2 60 83.3
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 6.2e-25 118.2 80 66.2
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 1.4e-24 117.1 60 83.3
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 5.2e-24 115.2 80 63.8
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 7.5e-23 111.3 65 75.4
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 2.2e-22 109.8 68 69.1
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 3.7e-22 109.0 72 66.7
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 2.4e-21 106.3 73 63.0
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 5.4e-21 105.1 52 84.6
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 1.9e-18 96.7 60 65.0
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 4.9e-14 82.0 68 51.5
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 3.5e-12 75.9 63 47.6
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 8.9e-08 61.2 75 41.3
MBI06_g44793_MAGBIO Magnolia biondii HOM05D007361 ORTHO05D009239 1.7e-06 57.0 69 46.4


User provided reference genes

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