Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025385 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.2e-137 492.3 244 100.0
CSS0007937 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 4.5e-74 282.0 241 65.6
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 3.9e-70 268.9 249 64.3
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 3.7e-68 262.3 158 86.7
CSS0038762 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.9e-64 250.0 307 52.8
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.4e-59 233.8 252 56.7
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 8.8e-46 188.0 147 67.3
Dinv24565 Davidia involucrata HOM05D005286 ORTHO05D006348 7.7e-42 174.9 229 47.2
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 1.1e-40 171.0 228 47.4
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 1.6e-39 167.2 230 44.8
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 6.1e-39 165.2 233 44.6
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 1.0e-38 164.5 236 44.5
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 1.0e-38 164.5 234 44.9
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 1.8e-38 163.7 235 43.8
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 1.8e-38 163.7 230 45.2
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 2.3e-38 163.3 225 44.9
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 2.3e-38 163.3 225 44.9
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 1.5e-37 160.6 234 46.2
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 9.8e-37 157.9 228 45.6
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 1.7e-36 157.1 230 45.7
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 3.7e-36 156.0 231 44.6
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 3.7e-36 156.0 226 45.6
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 6.3e-36 155.2 233 43.3
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 8.3e-36 154.8 241 43.2
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 5.4e-35 152.1 222 43.2
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 1.2e-34 151.0 211 44.5
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 1.6e-34 150.6 233 42.9
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.0e-34 150.2 230 42.6
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 2.7e-34 149.8 229 44.5
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 2.7e-34 149.8 236 41.9
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 4.5e-34 149.1 225 40.9
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 5.9e-34 148.7 230 41.3
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 5.9e-34 148.7 230 41.3
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 7.8e-34 148.3 235 41.3
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 7.8e-34 148.3 173 49.1
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 1.3e-33 147.5 181 44.8
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 1.7e-33 147.1 238 43.7
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 2.9e-33 146.4 234 40.2
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 2.9e-33 146.4 171 48.5
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 5.0e-33 145.6 232 40.1
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 6.6e-33 145.2 230 40.9
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 6.6e-33 145.2 230 40.9
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 6.6e-33 145.2 229 43.2
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 6.6e-33 145.2 232 40.1
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 6.6e-33 145.2 221 42.1
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 8.6e-33 144.8 239 41.4
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 1.1e-32 144.4 189 43.4
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 1.5e-32 144.1 224 42.4
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 3.3e-32 142.9 229 41.0
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 4.3e-32 142.5 232 39.7
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 5.6e-32 142.1 227 41.4
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 5.6e-32 142.1 234 41.5
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 5.6e-32 142.1 234 41.0
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 7.3e-32 141.7 226 41.2
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 9.5e-32 141.4 227 42.7
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 1.6e-31 140.6 207 41.5
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 1.6e-31 140.6 221 41.6
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 2.1e-31 140.2 230 40.4
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 2.1e-31 140.2 230 40.4
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 2.8e-31 139.8 175 44.6
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 3.6e-31 139.4 232 38.4
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 4.7e-31 139.0 207 43.5
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 4.7e-31 139.0 230 42.2
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 4.7e-31 139.0 227 38.3
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 6.1e-31 138.7 226 42.9
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 6.1e-31 138.7 170 46.5
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 6.1e-31 138.7 234 40.6
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 6.1e-31 138.7 193 45.6
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 8.0e-31 138.3 231 40.3
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 8.0e-31 138.3 192 44.3
QL10p041267 Quercus lobata HOM05D005286 ORTHO05D006348 1.4e-30 137.5 217 42.4
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 1.4e-30 137.5 175 44.6
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 1.8e-30 137.1 230 38.7
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 1.8e-30 137.1 210 43.8
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 1.8e-30 137.1 203 44.3
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 2.3e-30 136.7 222 40.1
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 6.8e-30 135.2 245 37.6
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 1.2e-29 134.4 243 39.5
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 2.6e-29 133.3 240 40.8
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 3.4e-29 132.9 240 36.7
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 4.4e-29 132.5 226 38.9
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 5.8e-29 132.1 179 44.1
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 5.8e-29 132.1 197 43.1
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 5.8e-29 132.1 252 37.3
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 7.5e-29 131.7 240 37.9
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 7.5e-29 131.7 207 39.1
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 7.5e-29 131.7 241 38.6
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 2.2e-28 130.2 241 38.6
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 1.4e-27 127.5 159 44.0
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 1.4e-27 127.5 177 44.6
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 5.4e-27 125.6 180 42.8
unitig_748.g8003 Utricularia gibba HOM05D005286 ORTHO05D006348 5.4e-27 125.6 229 40.2
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 7.0e-27 125.2 184 43.5
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 9.2e-27 124.8 189 41.3
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 2.7e-26 123.2 165 45.5
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 4.6e-26 122.5 184 45.1
Cpa.g.sc37.6 Carica papaya HOM05D005286 ORTHO05D006348 7.8e-26 121.7 148 46.6
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 1.0e-25 121.3 199 41.2
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 1.0e-25 121.3 205 39.0
Nitab4.5_0004530g0050 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.0e-25 121.3 171 43.9
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 1.3e-25 120.9 240 37.5
CDE08G1426 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 1.9e-24 117.1 169 41.4
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 5.6e-24 115.5 160 48.8
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 7.3e-24 115.2 147 44.9
RcHm_v2.0_Chr6g0261231 Rosa chinensis HOM05D005286 ORTHO05D006348 9.5e-24 114.8 147 42.9
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 1.4e-22 110.9 166 44.0
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 1.8e-22 110.5 147 42.9
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 1.8e-22 110.5 194 37.6
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 5.8e-21 105.5 172 39.0
Nitab4.5_0008592g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.3e-20 104.4 120 48.3
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 2.4e-19 100.1 157 39.5
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 2.1e-18 97.1 232 32.8
Nitab4.5_0008217g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 6.0e-18 95.5 84 54.8
Pp3c3_10560 Physcomitrium patens HOM05D005286 ORTHO05D006348 9.5e-16 88.2 147 34.7
Haze_10873 Corylus avellana HOM05D005286 ORTHO05D006348 1.6e-15 87.4 116 46.6
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis HOM05D005286 ORTHO05D006348 2.1e-15 87.0 182 31.9
SEGI_37681 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 1.1e-14 84.7 156 37.2
Os04g0692800 Oryza sativa ssp. japonica HOM05D005286 ORTHO05D006348 9.9e-13 78.2 138 38.4
Sabra07G0083900 Salix brachista HOM05D005286 ORTHO05D006348 1.3e-12 77.8 130 38.5
Mapoly0032s0088 Marchantia polymorpha HOM05D005286 ORTHO05D006348 4.1e-11 72.8 148 33.1
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 3.5e-10 69.7 173 32.4
Peaxi162Scf00151g00815 Petunia axillaris HOM05D005286 ORTHO05D006348 4.0e-06 56.2 66 42.4


User provided reference genes

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