Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003777 Camellia sinensis var. sinensis HOM05D010327 ORTHO05D010465 2.7e-43 178.3 94 100.0
CSS0025370 Camellia sinensis var. sinensis HOM05D010327 ORTHO05D010465 2.7e-43 178.3 94 100.0
Peaxi162Scf00305g01119 Petunia axillaris HOM05D010327 ORTHO05D010465 4.6e-19 97.8 90 62.2
MSTRG.23391 Avicennia marina HOM05D010327 ORTHO05D010465 3.8e-13 78.2 61 75.4
Oeu032260.1 Olea europaea HOM05D002749 ORTHO05D000708 1.6e-11 72.8 73 54.8
QL93p0100_0410 Quercus lobata HOM05D010327 ORTHO05D010465 2.1e-11 72.4 90 56.7
QL02p058001 Quercus lobata HOM05D010327 ORTHO05D010465 6.1e-11 70.9 90 55.6
TAR371G0200 Trochodendron aralioides HOM05D001630 ORTHO05D010465 7.9e-11 70.5 68 58.8
CsaV3_5G024170 Cucumis sativus L. HOM05D010327 ORTHO05D010465 8.8e-10 67.0 81 49.4
Atru.chr1.1896 Acer truncatum HOM05D010327 ORTHO05D010465 3.3e-09 65.1 60 60.0
FAN23G1235 Fragaria x ananassa HOM05D010327 ORTHO05D010465 1.7e-08 62.8 71 54.9
Rhsim13G0216800 Rhododendron simsii HOM05D010327 ORTHO05D010465 1.7e-08 62.8 60 58.3
FAN19G0505 Fragaria x ananassa HOM05D010327 ORTHO05D010465 2.2e-08 62.4 119 41.2
Cfa007553 Carpinus fangiana HOM05D009987 ORTHO05D010465 1.4e-07 59.7 60 55.0
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.8e-07 59.3 65 52.3
vmacro18191 Vaccinium macrocarpon HOM05D009987 ORTHO05D010465 3.1e-07 58.5 73 53.4
ClCG10G015020 Citrullus lanatus HOM05D009987 ORTHO05D010465 5.3e-07 57.8 85 48.2
AUR62008417 Chenopodium quinoa HOM05D024303 ORTHO05D010465 6.9e-07 57.4 91 42.9
SGA_v2.0_scaffold42G16091 Striga asiatica HOM05D010327 ORTHO05D010465 1.5e-06 56.2 73 43.8
CSS0049432 Camellia sinensis var. sinensis HOM05D009987 ORTHO05D010465 2.0e-06 55.8 93 41.9
TPR.G19663 Trifolium pratense HOM05D010327 ORTHO05D010465 3.4e-06 55.1 82 41.5
CSS0008541 Camellia sinensis var. sinensis HOM05D009987 ORTHO05D010465 4.5e-06 54.7 92 40.2
FAN09G0586 Fragaria x ananassa HOM05D009987 ORTHO05D010465 4.5e-06 54.7 81 45.7
FAN14G3494 Fragaria x ananassa HOM05D031568 ORTHO05D010465 4.5e-06 54.7 80 45.0
FvH4_6g24960 Fragaria vesca HOM05D031568 ORTHO05D010465 5.9e-06 54.3 80 43.8
MD03G1169600 Malus domestica HOM05D010327 ORTHO05D010465 5.9e-06 54.3 75 45.3


User provided reference genes

Program Settings