Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.4e-105 386.3 204 100.0
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.9e-64 247.7 159 86.2
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 4.2e-57 225.3 192 68.8
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 8.7e-55 217.6 189 68.3
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 2.5e-54 216.1 189 66.1
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.6e-54 214.9 188 67.6
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.3e-39 166.4 170 58.2
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 8.2e-37 157.9 197 53.3
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 6.9e-36 154.8 162 54.3
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 6.9e-36 154.8 152 55.9
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 2.6e-35 152.9 149 59.1
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 4.5e-35 152.1 163 56.4
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 4.5e-35 152.1 91 84.6
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 4.5e-35 152.1 180 52.2
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 4.5e-35 152.1 142 58.5
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 5.9e-35 151.8 124 66.1
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 5.9e-35 151.8 103 77.7
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 7.7e-35 151.4 194 52.1
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.7e-34 150.2 130 62.3
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 2.9e-34 149.4 145 59.3
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 5.0e-34 148.7 140 60.7
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 5.0e-34 148.7 114 66.7
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 5.0e-34 148.7 154 55.2
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 5.0e-34 148.7 174 52.3
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 8.5e-34 147.9 148 54.7
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 1.1e-33 147.5 94 80.9
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.9e-33 146.7 96 76.0
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 2.5e-33 146.4 150 58.0
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 2.5e-33 146.4 149 57.0
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 4.2e-33 145.6 160 54.4
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 4.2e-33 145.6 125 64.8
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.2e-33 145.6 169 54.4
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 4.2e-33 145.6 152 57.2
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 7.2e-33 144.8 96 75.0
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 7.2e-33 144.8 117 66.7
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 9.4e-33 144.4 158 55.7
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 9.4e-33 144.4 151 55.6
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 9.4e-33 144.4 139 56.8
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.2e-32 144.1 138 58.0
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.6e-32 143.7 190 49.5
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.6e-32 143.7 169 53.8
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.1e-32 143.3 169 53.8
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 2.7e-32 142.9 187 48.7
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 2.7e-32 142.9 172 50.6
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 4.6e-32 142.1 85 84.7
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 6.1e-32 141.7 96 71.9
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.1e-32 141.7 124 62.1
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 6.1e-32 141.7 114 63.2
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.4e-31 140.6 150 56.7
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.4e-31 140.6 122 62.3
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.4e-31 140.6 108 67.6
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.4e-31 140.6 91 74.7
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.4e-31 140.6 91 75.8
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.8e-31 140.2 190 46.8
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 3.9e-31 139.0 88 78.4
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 6.7e-31 138.3 153 53.6
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.7e-31 138.3 174 51.7
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 1.1e-30 137.5 90 75.6
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.5e-30 137.1 142 54.9
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.0e-30 136.7 192 48.4
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.0e-30 136.7 154 52.6
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 2.0e-30 136.7 105 66.7
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 3.3e-30 136.0 151 52.3
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 3.3e-30 136.0 142 53.5
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.3e-30 136.0 117 65.0
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 5.7e-30 135.2 117 64.1
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 5.7e-30 135.2 117 64.1
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 5.7e-30 135.2 151 53.6
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 9.7e-30 134.4 96 70.8
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 2.8e-29 132.9 187 49.7
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.7e-29 132.5 117 63.2
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.7e-29 132.5 108 65.7
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 3.7e-29 132.5 156 48.7
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.8e-29 132.1 85 77.6
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 6.3e-29 131.7 188 43.6
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 6.3e-29 131.7 151 49.0
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 6.3e-29 131.7 109 58.7
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 8.2e-29 131.3 195 46.7
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.4e-28 130.6 126 61.1
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 1.8e-28 130.2 151 48.3
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 1.8e-28 130.2 110 57.3
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.8e-28 130.2 108 63.9
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 2.4e-28 129.8 105 60.0
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 2.4e-28 129.8 88 72.7
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 3.1e-28 129.4 142 52.1
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 4.1e-28 129.0 124 54.8
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 4.1e-28 129.0 122 59.8
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 4.1e-28 129.0 151 53.0
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 5.3e-28 128.6 127 58.3
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 6.9e-28 128.3 173 44.5
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 6.9e-28 128.3 88 72.7
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 6.9e-28 128.3 132 57.6
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 6.9e-28 128.3 149 53.7
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 6.9e-28 128.3 149 53.7
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 9.1e-28 127.9 88 71.6
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.0e-27 126.7 117 58.1
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 2.0e-27 126.7 117 58.1
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.0e-26 124.4 154 51.9
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 3.8e-26 122.5 89 69.7
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.8e-26 122.5 104 61.5
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 6.5e-26 121.7 118 53.4
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 8.5e-26 121.3 174 46.0
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.4e-25 120.6 86 68.6
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 3.2e-25 119.4 206 40.3
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 5.5e-25 118.6 137 51.1
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 5.2e-23 112.1 119 53.8
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 6.7e-23 111.7 106 55.7
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 1.2e-19 100.9 131 45.0
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 7.2e-17 91.7 171 34.5
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 4.7e-16 89.0 53 77.4
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 6.7e-15 85.1 106 47.2
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 7.7e-11 71.6 50 62.0
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 3.2e-09 66.2 128 37.5
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 4.2e-09 65.9 74 41.9
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.1e-08 63.5 108 42.6
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 5.2e-07 58.9 95 32.6


User provided reference genes

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