Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 1.1e-110 403.3 205 100.0
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 2.9e-74 282.3 161 85.7
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 2.8e-69 265.8 167 77.2
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 1.2e-67 260.4 166 74.7
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 3.4e-67 258.8 167 75.4
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 4.5e-67 258.5 154 81.2
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 4.5e-67 258.5 194 70.1
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 5.8e-67 258.1 158 81.6
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 2.9e-66 255.8 148 85.1
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 1.4e-65 253.4 163 73.0
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 2.5e-65 252.7 148 83.1
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 2.5e-65 252.7 162 77.2
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 5.5e-65 251.5 163 74.8
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.6e-64 250.0 166 71.1
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 2.1e-64 249.6 152 78.9
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 2.7e-64 249.2 152 78.3
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 4.6e-64 248.4 163 74.2
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 6.0e-64 248.1 159 76.7
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 1.8e-63 246.5 163 73.6
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 3.9e-63 245.4 152 77.0
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 5.1e-63 245.0 167 73.1
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 5.1e-63 245.0 163 75.5
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 1.1e-62 243.8 159 74.8
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.1e-62 243.8 167 70.7
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 1.1e-62 243.8 148 78.4
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 1.5e-62 243.4 165 73.3
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 1.9e-62 243.0 163 71.8
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 1.9e-62 243.0 164 71.3
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 2.5e-62 242.7 205 60.5
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 3.3e-62 242.3 149 76.5
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 4.3e-62 241.9 159 74.8
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 7.4e-62 241.1 163 70.6
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 2.8e-61 239.2 164 73.2
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 2.8e-61 239.2 158 75.3
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 3.7e-61 238.8 168 72.0
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 4.8e-61 238.4 163 71.2
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 4.8e-61 238.4 163 71.2
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 6.3e-61 238.0 180 67.2
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 1.8e-60 236.5 158 74.1
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.4e-60 236.1 154 75.3
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 3.1e-60 235.7 143 79.0
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 9.0e-60 234.2 161 70.2
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 9.0e-60 234.2 161 70.8
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 9.0e-60 234.2 142 79.6
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 1.5e-59 233.4 146 77.4
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 2.0e-59 233.0 144 77.1
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 2.0e-59 233.0 142 79.6
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 3.4e-59 232.3 158 73.4
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 3.4e-59 232.3 160 73.8
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 5.9e-59 231.5 148 76.4
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 1.0e-58 230.7 185 64.3
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 3.8e-58 228.8 157 72.6
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 5.0e-58 228.4 207 58.9
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 6.5e-58 228.0 159 68.6
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 6.5e-58 228.0 158 72.2
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 8.5e-58 227.6 152 73.7
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 1.1e-57 227.3 154 69.5
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 1.1e-57 227.3 150 72.7
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 1.1e-57 227.3 163 67.5
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 1.4e-57 226.9 150 72.7
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 1.9e-57 226.5 150 71.3
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 1.9e-57 226.5 148 73.0
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 2.5e-57 226.1 173 65.9
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 3.2e-57 225.7 150 72.0
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 3.2e-57 225.7 150 72.0
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 3.2e-57 225.7 161 68.3
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 3.2e-57 225.7 150 72.7
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 4.2e-57 225.3 150 72.0
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 7.2e-57 224.6 144 72.2
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 9.3e-57 224.2 159 67.9
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 1.2e-56 223.8 153 70.6
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 1.2e-56 223.8 150 71.3
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 1.6e-56 223.4 143 74.8
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 2.1e-56 223.0 164 65.9
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 2.1e-56 223.0 158 69.0
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 2.1e-56 223.0 158 70.3
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 2.1e-56 223.0 150 70.0
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 2.7e-56 222.6 163 68.1
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 4.6e-56 221.9 143 73.4
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 7.9e-56 221.1 163 65.0
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 7.9e-56 221.1 143 72.0
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 7.9e-56 221.1 164 64.0
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 7.9e-56 221.1 161 68.9
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 1.0e-55 220.7 143 71.3
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 1.0e-55 220.7 148 70.9
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 1.0e-55 220.7 148 70.9
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.0e-55 220.7 163 67.5
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 1.0e-55 220.7 143 73.4
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 1.0e-55 220.7 143 73.4
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 1.0e-55 220.7 150 72.0
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.3e-55 220.3 151 72.2
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 1.8e-55 219.9 143 77.6
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 2.3e-55 219.5 161 67.1
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 3.0e-55 219.2 161 67.7
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 3.9e-55 218.8 153 69.9
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 5.1e-55 218.4 165 64.8
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 8.7e-55 217.6 153 66.0
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 8.7e-55 217.6 147 71.4
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 1.1e-54 217.2 144 74.3
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 1.1e-54 217.2 158 68.4
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 1.9e-54 216.5 143 74.8
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 2.5e-54 216.1 159 72.3
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.5e-54 216.1 147 70.7
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 3.3e-54 215.7 161 67.1
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 5.7e-54 214.9 150 66.7
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 9.7e-54 214.2 149 69.8
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 1.6e-53 213.4 143 72.7
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 2.2e-53 213.0 159 68.6
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.2e-53 213.0 147 69.4
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 2.2e-53 213.0 152 67.8
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 3.7e-53 212.2 150 68.7
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 8.2e-53 211.1 143 71.3
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 1.4e-52 210.3 165 63.6
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 6.9e-52 208.0 141 70.9
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 7.7e-51 204.5 153 64.7
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 1.0e-50 204.1 143 69.2
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.3e-50 203.8 153 66.0
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 1.7e-50 203.4 153 64.7
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 3.8e-50 202.2 161 62.7
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 6.5e-50 201.4 161 64.0
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.1e-49 200.7 166 62.0
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 2.5e-49 199.5 143 67.1
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 4.4e-46 188.7 158 57.0
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 1.3e-45 187.2 164 61.0
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 2.6e-43 179.5 186 53.2
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 5.0e-42 175.3 165 56.4
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 2.7e-40 169.5 154 56.5
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 7.9e-40 167.9 145 56.6
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.4e-39 167.2 180 48.3
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 1.8e-39 166.8 97 82.5
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 7.4e-38 161.4 101 75.2
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 9.7e-38 161.0 153 54.2
Nitab4.5_0000642g0190 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.4e-36 156.4 149 57.0
SalBow5G1630 Salvia bowleyana HOM05D004983 ORTHO05D005847 1.3e-34 150.6 164 52.4
Sed0011699 Sechium edule HOM05D004983 ORTHO05D005847 1.1e-33 147.5 90 78.9
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 2.0e-27 126.7 144 43.1
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 3.6e-24 115.9 136 46.3
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 6.1e-24 115.2 94 62.8
Nitab4.5_0009486g0020 Nicotiana tabacum HOM05D004983 ORTHO05D005847 4.4e-22 109.0 65 78.5
Pp3c12_22470 Physcomitrium patens HOM05D004983 ORTHO05D005847 4.4e-22 109.0 129 48.1
Pp3c3_32060 Physcomitrium patens HOM05D004983 ORTHO05D005847 4.8e-21 105.5 80 62.5
GSVIVG01020126001 Vitis vinifera HOM05D004983 ORTHO05D005847 1.0e-18 97.8 77 58.4
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 7.2e-17 91.7 152 36.8
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 2.1e-16 90.1 156 36.5
SEGI_36548 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 5.7e-14 82.0 73 54.8
Ca_28882_v3 Cicer arietinum L. HOM05D004983 ORTHO05D005847 4.4e-06 55.8 109 35.8


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