Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025359 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.0e-55 218.8 102 100.0
CSS0024732 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.8e-54 214.9 102 98.0
CSS0046961 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.8e-43 177.9 102 85.3
CSS0045379 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 5.9e-36 154.1 99 63.6
CSS0031335 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.8e-35 151.4 97 66.0
CSS0005869 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.6e-33 144.8 102 62.7
CSS0005179 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.6e-25 118.2 98 45.9
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.8e-24 114.0 82 61.0
CSS0002270 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.3e-22 107.5 76 50.0
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.1e-21 104.8 99 41.4
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-20 102.4 96 41.7
CSS0034649 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 4.5e-20 101.3 87 43.7
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-19 99.0 96 41.7
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.9e-19 98.6 59 64.4
CSS0016353 Camellia sinensis var. sinensis HOM05D002203 ORTHO05D013815 1.1e-18 96.7 101 41.6
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-18 96.3 96 38.5
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-18 95.9 100 38.0
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 9.5e-18 93.6 96 37.5
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-17 92.4 97 38.1
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.7e-14 81.6 100 39.0
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-12 75.5 96 31.2
CSS0024939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.6e-12 74.7 96 36.5
Atru.chr1.3206 Acer truncatum HOM05D000003 ORTHO05D002259 6.0e-12 74.3 97 29.9
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.0e-11 72.0 75 36.0
CSS0010072 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.9e-10 69.3 48 64.6
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-10 68.6 99 32.3
CSS0029089 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-10 68.2 56 46.4
CSS0026307 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.3e-10 67.4 55 47.3
CSS0022483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-10 67.0 55 47.3
CSS0039930 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-10 67.0 55 47.3
CSS0021010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 66.6 92 32.6
CSS0044712 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-09 65.5 62 40.3
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 2.8e-09 65.5 86 31.4
Atru.chr13.2301 Acer truncatum HOM05D000003 ORTHO05D002259 3.6e-09 65.1 99 30.3
Atru.chr1.3846 Acer truncatum HOM05D000003 ORTHO05D002259 4.7e-09 64.7 96 31.2
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.2e-09 64.3 98 31.6
Rhsim12G0011400 Rhododendron simsii HOM05D012301 ORTHO05D013815 1.4e-08 63.2 70 35.7
Atru.chr6.184 Acer truncatum HOM05D000003 ORTHO05D002259 1.8e-08 62.8 97 26.8
Atru.chr6.296 Acer truncatum HOM05D000003 ORTHO05D002259 1.8e-08 62.8 99 33.3
Atru.chr11.1160 Acer truncatum HOM05D000003 ORTHO05D002259 3.1e-08 62.0 97 29.9
CSS0011659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-08 62.0 94 31.9
Sc24g0002380 Simmondsia chinensis HOM05D003282 ORTHO05D003637 3.1e-08 62.0 57 50.9
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-07 58.9 101 27.7
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-07 58.9 95 26.3
CSS0008056 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-07 58.5 58 44.8
Thecc.05G093100 Theobroma cacao HOM05D000003 ORTHO05D002259 5.8e-07 57.8 87 32.2
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-06 55.5 56 37.5
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-06 55.5 56 37.5
Thecc.05G198700 Theobroma cacao HOM05D000003 ORTHO05D002259 2.9e-06 55.5 64 39.1
Atru.chr7.607 Acer truncatum HOM05D000003 ORTHO05D002259 6.4e-06 54.3 74 27.0
PSO017G5521 Papaver somniferum HOM05D000003 ORTHO05D000004 6.4e-06 54.3 76 34.2
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-06 53.9 56 37.5
PSO421G0296 Papaver somniferum HOM05D000003 ORTHO05D000004 8.3e-06 53.9 88 31.8


User provided reference genes

Program Settings