Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.8e-48 194.9 93 100.0
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.0e-47 193.0 93 98.9
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-46 189.5 93 96.8
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.6e-42 173.7 92 89.1
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.1e-40 168.7 93 87.1
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.2e-40 167.2 92 85.9
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.3e-39 165.2 92 83.7
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.8e-38 160.6 92 80.4
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.5e-38 160.2 92 80.4
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.4e-36 154.1 97 77.3
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.4e-36 154.1 97 77.3
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.4e-36 154.1 97 77.3
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-35 152.9 97 76.3
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.6e-32 141.4 92 70.7
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-31 138.3 92 67.4
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.0e-31 137.9 92 68.5
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.2e-31 137.5 92 67.4
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 8.9e-31 136.7 92 66.3
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.7e-29 132.5 92 65.2
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.9e-29 131.0 92 64.1
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 6.6e-26 120.6 92 58.7
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 3.3e-25 118.2 91 59.3
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 9.5e-25 116.7 92 57.6
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 1.2e-24 116.3 92 57.6
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 2.8e-24 115.2 92 56.5
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 4.7e-24 114.4 92 55.4
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.2e-24 114.0 74 74.3
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-21 106.3 83 55.4
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.7e-21 105.9 74 68.9
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.9e-21 105.1 96 54.2
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.9e-21 105.1 92 50.0
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.2e-20 101.7 92 50.0
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.2e-20 100.1 92 48.9
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.1e-19 99.0 92 48.9
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 2.7e-19 98.6 92 52.2
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.5e-19 98.2 112 47.3
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.0e-19 97.4 92 48.9
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 6.0e-19 97.4 85 52.9
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.5e-17 92.0 90 50.0
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.6e-17 90.1 78 52.6
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-15 86.7 60 61.7
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.8e-15 84.0 76 48.7
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 5.8e-14 80.9 57 63.2
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 9.9e-14 80.1 88 45.5
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-13 79.7 88 45.5
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-13 79.7 88 45.5
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.2e-13 79.0 55 61.8
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 2.9e-13 78.6 53 64.2
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.8e-13 78.2 54 61.1
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 2.4e-12 75.5 88 43.2
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.2e-12 75.1 114 36.8
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 5.4e-12 74.3 96 41.7
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.3e-12 73.6 55 58.2
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 9.3e-12 73.6 83 44.6
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-11 72.8 79 45.6
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.0e-11 70.9 50 56.0
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 1.0e-10 70.1 101 38.6
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-10 69.7 101 38.6
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 2.3e-10 68.9 101 38.6
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 2.3e-10 68.9 101 37.6
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 2.3e-10 68.9 101 38.6
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 3.0e-10 68.6 96 37.5
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.6e-10 67.4 48 56.2
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 8.7e-10 67.0 101 37.6
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 8.7e-10 67.0 101 37.6
CSS0004170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.1e-09 66.6 34 85.3
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-09 66.6 100 37.0
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.5e-09 66.2 45 64.4
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 1.9e-09 65.9 91 35.2
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-09 65.9 91 35.2
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 4.3e-09 64.7 96 34.4
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 4.3e-09 64.7 91 35.2
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 4.3e-09 64.7 91 35.2
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-09 64.7 91 35.2
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 5.6e-09 64.3 91 35.2
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 9.6e-09 63.5 65 49.2
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 9.6e-09 63.5 91 34.1
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.6e-08 62.8 48 54.2
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 1.6e-08 62.8 91 34.1
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 2.1e-08 62.4 91 33.0
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 2.8e-08 62.0 90 35.6
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 4.8e-08 61.2 91 33.0
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 8.1e-08 60.5 91 34.1
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.1e-07 60.1 39 74.4
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 1.8e-07 59.3 71 39.4
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 2.4e-07 58.9 96 31.2
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.9e-07 57.4 70 41.4
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 6.9e-07 57.4 63 44.4
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 9.0e-07 57.0 41 58.5
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.6 84 32.1
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 1.5e-06 56.2 50 52.0
CSS0037544 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-06 55.8 43 65.1
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 2.0e-06 55.8 86 31.4
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 2.0e-06 55.8 83 28.9
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 2.6e-06 55.5 87 32.2


User provided reference genes

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