Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025348 Camellia sinensis var. sinensis HOM05D026757 ORTHO05D009802 3.7e-52 208.0 108 100.0
CSS0024975 Camellia sinensis var. sinensis HOM05D026757 ORTHO05D007247 3.1e-43 178.3 107 87.9
CSS0007024 Camellia sinensis var. sinensis HOM05D026757 ORTHO05D007247 5.7e-37 157.5 106 81.1
CSS0021920 Camellia sinensis var. sinensis HOM05D026757 ORTHO05D009802 4.8e-36 154.5 107 79.4
CSS0047449 Camellia sinensis var. sinensis HOM05D002223 ORTHO05D009240 2.0e-18 95.9 64 75.0
CSS0029216 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D009086 3.3e-13 78.6 54 75.9
CSS0012919 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D009086 4.8e-12 74.7 52 75.0
CSS0018387 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D009802 5.3e-11 71.2 54 68.5
CSS0037818 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 7.0e-11 70.9 54 66.7
CSS0013032 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D000165 2.6e-10 68.9 55 69.1
CSS0038117 Camellia sinensis var. sinensis HOM05D007602 ORTHO05D009086 7.7e-10 67.4 55 67.3
CSS0028308 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D009802 1.0e-09 67.0 55 65.5
CSS0050070 Camellia sinensis var. sinensis HOM05D041584 ORTHO05D007247 3.8e-09 65.1 72 54.2
CSS0012521 Camellia sinensis var. sinensis HOM05D003252 ORTHO05D003640 3.2e-08 62.0 80 50.0
CSS0023408 Camellia sinensis var. sinensis HOM05D001561 ORTHO05D001715 5.5e-08 61.2 44 70.5
CSS0045317 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D109946 2.7e-07 58.9 52 63.5
CSS0004827 Camellia sinensis var. sinensis HOM05D000035 ORTHO05D000009 1.0e-06 57.0 31 83.9
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.4e-06 56.6 46 67.4
CSS0035935 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D110269 3.0e-06 55.5 52 61.5
CSS0001140 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.0e-06 55.1 33 81.8
CSS0024929 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.0e-06 55.1 33 81.8
CSS0049581 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.0e-06 55.1 33 81.8
CSS0011426 Camellia sinensis var. sinensis HOM05D041584 ORTHO05D007247 5.2e-06 54.7 47 61.7


User provided reference genes

Program Settings