Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025322 Camellia sinensis var. sinensis HOM05D002012 ORTHO05D001992 3.1e-96 355.1 179 100.0
Hma1.2p1_2051F.1_g312560 Hydrangea macrophylla HOM05D002012 ORTHO05D001992 6.3e-41 171.4 120 72.5
Rhsim13G0040500 Rhododendron simsii HOM05D002012 ORTHO05D001992 6.9e-40 167.9 120 71.7
vmacro02714 Vaccinium macrocarpon HOM05D002012 ORTHO05D001992 6.5e-38 161.4 119 73.1
TWI12G0950 Tripterygium wilfordii HOM05D002012 ORTHO05D001992 1.6e-36 156.8 123 65.0
CiPaw.04G191100 Carya illinoinensis HOM05D002012 ORTHO05D001992 1.5e-34 150.2 123 63.4
PGR044G2406 Punica granatum HOM05D002012 ORTHO05D001992 2.8e-33 146.0 120 65.8
MD05G1186700 Malus domestica HOM05D002012 ORTHO05D001992 1.1e-32 144.1 123 61.8
TAR365G0650 Trochodendron aralioides HOM05D002012 ORTHO05D001992 4.1e-32 142.1 132 61.4
Cc01_g17700 Coffea canephora HOM05D002012 ORTHO05D001992 5.3e-32 141.7 125 64.8
QL09p042353 Quercus lobata HOM05D002012 ORTHO05D001992 2.0e-31 139.8 125 62.4
Prupe.8G213500 Prunus persica HOM05D002012 ORTHO05D001992 2.6e-31 139.4 119 62.2
MD10G1174800 Malus domestica HOM05D002012 ORTHO05D001992 5.9e-31 138.3 123 62.6
CiPaw.03G272000 Carya illinoinensis HOM05D002012 ORTHO05D001992 1.3e-30 137.1 127 60.6
Atru.chr5.1958 Acer truncatum HOM05D002012 ORTHO05D001992 2.9e-30 136.0 129 59.7
Haze_24719 Corylus avellana HOM05D002012 ORTHO05D001992 2.9e-30 136.0 113 63.7
Cpa.g.sc87.50 Carica papaya HOM05D002012 ORTHO05D001992 1.5e-29 133.7 115 60.9
Thecc.01G248500 Theobroma cacao HOM05D002012 ORTHO05D001992 1.5e-29 133.7 124 58.9
Lj1C76G4 Lonicera japonica HOM05D002012 ORTHO05D001992 1.9e-29 133.3 121 63.6
ClCG06G001350 Citrullus lanatus HOM05D002012 ORTHO05D001992 5.5e-29 131.7 125 60.8
Ciclev10018880m.g Citrus clementina HOM05D002012 ORTHO05D001992 2.1e-28 129.8 122 61.5
Peaxi162Scf00517g00034 Petunia axillaris HOM05D002012 ORTHO05D001992 2.7e-28 129.4 117 59.8
Psat3g052200 Pisum sativum HOM05D002012 ORTHO05D001992 4.7e-28 128.6 120 57.5
CsaV3_6G007290 Cucumis sativus L. HOM05D002012 ORTHO05D001992 2.3e-27 126.3 125 57.6
MELO3C022397.2 Cucumis melo HOM05D002012 ORTHO05D001992 3.9e-27 125.6 125 57.6
CAN.G771.43 Capsicum annuum HOM05D002012 ORTHO05D001992 5.2e-27 125.2 117 58.1
FvH4_2g20280 Fragaria vesca HOM05D002012 ORTHO05D001992 5.2e-27 125.2 123 55.3
FAN24G3044 Fragaria x ananassa HOM05D002012 ORTHO05D001992 5.2e-27 125.2 123 55.3
FAN27G2338 Fragaria x ananassa HOM05D002012 ORTHO05D001992 5.2e-27 125.2 123 55.3
Sabra02G0194200 Salix brachista HOM05D002012 ORTHO05D001992 5.2e-27 125.2 124 58.9
Glyma.19G170000 Glycine max HOM05D002012 ORTHO05D001992 6.7e-27 124.8 124 51.6
Potri.002G255500 Populus trichocarpa HOM05D002012 ORTHO05D001992 6.7e-27 124.8 124 57.3
Medtr7g099030 Medicago truncatula HOM05D002012 ORTHO05D001992 1.1e-26 124.0 122 54.9
Gorai.001G237100 Gossypium raimondii HOM05D002012 ORTHO05D001992 1.5e-26 123.6 123 54.5
Solyc06g083710.3 Solanum lycopersicum HOM05D002012 ORTHO05D001992 2.6e-26 122.9 117 58.1
Sopen06g035130 Solanum pennellii HOM05D002012 ORTHO05D001992 2.6e-26 122.9 117 58.1
TPR.G30853 Trifolium pratense HOM05D002012 ORTHO05D001992 2.6e-26 122.9 122 53.3
Oeu052092.1 Olea europaea HOM05D002012 ORTHO05D001992 3.3e-26 122.5 125 52.8
FAN15G2348 Fragaria x ananassa HOM05D002012 ORTHO05D001992 4.4e-26 122.1 123 54.5
Gohir.A07G203700 Gossypium hirsutum HOM05D002012 ORTHO05D001992 4.4e-26 122.1 123 54.5
Lj1g0010723 Lotus japonicus HOM05D002012 ORTHO05D001992 7.4e-26 121.3 129 51.2
Ca_08757_v3 Cicer arietinum L. HOM05D002012 ORTHO05D001992 1.3e-25 120.6 121 52.1
Duzib138G0128 Durio zibethinus HOM05D002012 ORTHO05D001992 1.3e-25 120.6 125 55.2
VMungo1383G3347 Vigna mungo HOM05D002012 ORTHO05D001992 1.3e-25 120.6 120 54.2
Nn1g03012 Nelumbo nucifera HOM05D002012 ORTHO05D001992 2.2e-25 119.8 121 57.0
Glyma.03G168600 Glycine max HOM05D002012 ORTHO05D001992 2.8e-25 119.4 121 51.2
Gohir.D07G209700 Gossypium hirsutum HOM05D002012 ORTHO05D001992 2.8e-25 119.4 123 52.8
Sed0023546 Sechium edule HOM05D002012 ORTHO05D001992 2.8e-25 119.4 122 52.5
Gohir.A11G134100 Gossypium hirsutum HOM05D002012 ORTHO05D001992 6.3e-25 118.2 126 54.0
Gorai.007G150400 Gossypium raimondii HOM05D002012 ORTHO05D001992 6.3e-25 118.2 126 54.0
Phvul.001G167000 Phaseolus vulgaris HOM05D002012 ORTHO05D001992 6.3e-25 118.2 124 48.4
RcHm_v2.0_Chr6g0286081 Rosa chinensis HOM05D002012 ORTHO05D001992 1.1e-24 117.5 129 55.8
Gohir.D11G140200 Gossypium hirsutum HOM05D002012 ORTHO05D001992 1.4e-24 117.1 126 54.0
Manes.13G038800 Manihot esculenta HOM05D002012 ORTHO05D001992 1.4e-24 117.1 127 54.3
Migut.N02235 Erythranthe guttata HOM05D002012 ORTHO05D001992 1.6e-23 113.6 128 52.3
SalBow6G1269 Salvia bowleyana HOM05D002012 ORTHO05D001992 1.6e-23 113.6 126 54.8
MSTRG.17526 Avicennia marina HOM05D002012 ORTHO05D001992 2.0e-23 113.2 126 52.4
AUR62008816 Chenopodium quinoa HOM05D002012 ORTHO05D001992 2.6e-23 112.8 118 54.2
Lalb_Chr01g0019471 Lupinus albus HOM05D002012 ORTHO05D001992 2.6e-23 112.8 133 46.6
AUR62025424 Chenopodium quinoa HOM05D002012 ORTHO05D001992 7.7e-23 111.3 118 53.4
Aqoxy5G00110 Aquilegia oxysepala HOM05D002012 ORTHO05D001992 1.3e-22 110.5 128 55.5
Sc17g0002730 Simmondsia chinensis HOM05D002012 ORTHO05D001992 2.2e-22 109.8 117 51.3
Ah.15g091510 Amaranthus hybridus HOM05D002012 ORTHO05D001992 3.8e-22 109.0 118 52.5
EL10Ac7g17707 Beta vulgaris HOM05D002012 ORTHO05D001992 5.0e-22 108.6 118 53.4
Nitab4.5_0003167g0100 Nicotiana tabacum HOM05D002012 ORTHO05D001992 1.9e-21 106.7 103 58.3
Nitab4.5_0002538g0090 Nicotiana tabacum HOM05D002012 ORTHO05D001992 7.2e-21 104.8 103 57.3
Lalb_Chr25g0289771 Lupinus albus HOM05D002012 ORTHO05D001992 1.2e-20 104.0 129 48.1
GSVIVG01028445001 Vitis vinifera HOM05D002012 ORTHO05D001992 2.1e-20 103.2 70 70.0
PSO832G4575 Papaver somniferum HOM05D002012 ORTHO05D001992 4.7e-20 102.1 113 50.4
Hund05494 Selenicereus undatus HOM05D002012 ORTHO05D001992 8.0e-20 101.3 120 50.8
PSO210G6626 Papaver somniferum HOM05D002012 ORTHO05D001992 1.8e-19 100.1 113 49.6
AT2G20320 Arabidopsis thaliana HOM05D002012 ORTHO05D001992 4.4e-18 95.5 92 59.8
Aa31LG8G17310 Aethionema arabicum HOM05D002012 ORTHO05D001992 9.8e-18 94.4 96 59.4
Thhalv10001892m.g Eutrema salsugineum HOM05D002012 ORTHO05D001992 9.8e-18 94.4 92 58.7
AL3G53270 Arabidopsis lyrata HOM05D002012 ORTHO05D001992 1.3e-17 94.0 92 58.7
Manes.12G041101 Manihot esculenta HOM05D002012 ORTHO05D001992 1.7e-17 93.6 153 41.2
BcaNung04797 Brassica carinata HOM05D002012 ORTHO05D001992 2.2e-17 93.2 94 57.4
C09p15180 Brassica napus HOM05D002012 ORTHO05D001992 2.2e-17 93.2 94 57.4
A07p00390 Brassica napus HOM05D002012 ORTHO05D001992 2.8e-17 92.8 94 57.4
BraA07t27831Z Brassica rapa HOM05D002012 ORTHO05D001992 2.8e-17 92.8 94 57.4
Sp3g33560 Schrenkiella parvula HOM05D002012 ORTHO05D001992 2.8e-17 92.8 92 57.6
BcaB03g16819 Brassica carinata HOM05D002012 ORTHO05D001992 6.3e-17 91.7 94 56.4
A09p12820 Brassica napus HOM05D002012 ORTHO05D001992 6.3e-17 91.7 94 56.4
C07p00810 Brassica napus HOM05D002012 ORTHO05D001992 6.3e-17 91.7 94 56.4
Hund18299 Selenicereus undatus HOM05D002012 ORTHO05D001992 1.1e-16 90.9 117 47.0
BraA09t36925Z Brassica rapa HOM05D002012 ORTHO05D001992 1.4e-16 90.5 94 55.3
BolC9t54424H Brassica oleracea HOM05D002012 ORTHO05D001992 1.8e-16 90.1 94 56.4
Carub.0003s3466 Capsella rubella HOM05D002012 ORTHO05D001992 1.8e-16 90.1 95 57.9
BcaC06g36715 Brassica carinata HOM05D002012 ORTHO05D001992 2.4e-16 89.7 94 55.3
BolC7t40520H Brassica oleracea HOM05D002012 ORTHO05D001992 2.4e-16 89.7 94 55.3
Nn3g19823 Nelumbo nucifera HOM05D002012 ORTHO05D001992 2.4e-16 89.7 120 50.8
CARHR110850 Cardamine hirsuta HOM05D002012 ORTHO05D001992 3.1e-16 89.4 118 46.6
THA.LOC104814537 Tarenaya hassleriana HOM05D002012 ORTHO05D001992 7.0e-16 88.2 118 48.3
SGA_v2.0_scaffold138G35174 Striga asiatica HOM05D002012 ORTHO05D001992 1.2e-15 87.4 127 39.4
arahy.Tifrunner.gnm1.ann1.NDA83R Arachis hypogaea HOM05D002012 ORTHO05D001992 2.7e-15 86.3 153 38.6
BcaB07g31600 Brassica carinata HOM05D002012 ORTHO05D001992 3.5e-15 85.9 92 54.3
ATR0787G023 Amborella trichopoda HOM05D002012 ORTHO05D001992 1.3e-14 84.0 102 49.0
arahy.Tifrunner.gnm1.ann1.NJ6SD5 Arachis hypogaea HOM05D002012 ORTHO05D001992 3.8e-14 82.4 153 37.9
THA.LOC104820065 Tarenaya hassleriana HOM05D002012 ORTHO05D001992 5.0e-14 82.0 91 57.1
SHI26793 Sapria himalayana HOM05D000105 ORTHO05D000023 6.5e-14 81.6 123 41.5
ECA248G2013 Erigeron canadensis HOM05D002012 ORTHO05D001992 3.0e-11 72.8 68 54.4
DCAR_026766 Daucus carota HOM05D002012 ORTHO05D001992 5.2e-11 72.0 71 53.5
MBI10_g39248_MAGBIO Magnolia biondii HOM05D002012 ORTHO05D001992 8.8e-11 71.2 111 40.5
HanXRQChr01g0014901 Helianthus annuus HOM05D002012 ORTHO05D001992 1.5e-10 70.5 66 57.6
Migut.D00487 Erythranthe guttata HOM05D002012 ORTHO05D001992 4.4e-10 68.9 127 37.8
Ah.08g213680 Amaranthus hybridus HOM05D002012 ORTHO05D001992 9.8e-10 67.8 103 42.7
MBI07_g21078_MAGBIO Magnolia biondii HOM05D002012 ORTHO05D001992 6.3e-09 65.1 121 38.0
SEGI_14720 Sequoiadendron giganteum HOM05D002012 ORTHO05D001992 6.3e-09 65.1 102 39.2


User provided reference genes

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