Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 4.8e-182 641.0 309 100.0
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.0e-180 635.6 309 99.0
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 1.9e-133 479.6 287 77.0
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 4.1e-133 478.4 291 77.3
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 1.5e-130 469.9 291 76.3
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.9e-130 469.5 284 78.2
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.5e-130 469.2 284 78.2
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 2.5e-130 469.2 287 77.7
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 8.1e-129 464.2 287 76.3
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 1.4e-128 463.4 289 75.8
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 1.8e-128 463.0 294 74.5
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.1e-128 462.2 284 77.1
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 3.1e-128 462.2 294 74.8
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 5.2e-128 461.5 308 74.7
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.7e-126 456.4 306 72.9
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 6.4e-126 454.5 287 73.2
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 1.1e-125 453.8 291 73.9
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 1.1e-125 453.8 289 73.0
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.4e-125 453.4 299 72.6
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 5.4e-125 451.4 289 73.4
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 7.1e-125 451.1 288 74.7
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 1.2e-124 450.3 293 71.0
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 1.6e-124 449.9 307 69.7
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 2.1e-124 449.5 289 71.6
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 2.1e-124 449.5 287 72.5
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.7e-124 449.1 309 70.2
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 6.0e-124 448.0 287 73.2
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 1.7e-123 446.4 288 72.6
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 2.3e-123 446.0 296 70.9
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 5.1e-123 444.9 287 72.8
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 6.6e-123 444.5 288 72.2
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 8.7e-123 444.1 287 71.8
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 1.1e-122 443.7 286 73.8
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.5e-122 443.4 288 72.2
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.9e-122 443.0 305 71.5
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 1.9e-122 443.0 289 72.7
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.3e-121 440.3 302 70.5
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 2.1e-121 439.5 287 72.1
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 8.1e-121 437.6 306 68.0
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 1.4e-120 436.8 282 72.0
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 2.4e-120 436.0 306 69.6
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 3.1e-120 435.6 283 72.1
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 4.0e-120 435.3 290 71.4
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 4.0e-120 435.3 309 67.0
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 5.3e-120 434.9 287 70.4
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 9.0e-120 434.1 286 73.4
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 1.2e-119 433.7 310 68.1
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 2.6e-119 432.6 287 70.0
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 4.4e-119 431.8 307 68.1
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 4.4e-119 431.8 306 68.6
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 7.6e-119 431.0 291 70.8
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 2.9e-118 429.1 293 69.6
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 2.4e-117 426.0 289 70.6
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 4.2e-117 425.2 283 68.9
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 7.1e-117 424.5 307 67.4
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 1.2e-116 423.7 287 69.0
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 1.6e-116 423.3 308 65.9
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.6e-116 423.3 290 70.0
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.6e-116 423.3 301 71.4
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 3.5e-116 422.2 294 68.7
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.3e-115 420.2 304 65.1
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 2.3e-115 419.5 307 68.7
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 8.7e-115 417.5 310 66.5
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 4.3e-114 415.2 309 65.7
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 3.6e-113 412.1 288 66.3
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 2.4e-112 409.5 288 65.6
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 4.0e-112 408.7 298 62.8
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 1.2e-111 407.1 301 63.1
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 3.4e-111 405.6 286 67.8
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 3.4e-111 405.6 346 60.4
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 3.4e-111 405.6 287 70.4
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.9e-110 402.5 289 66.8
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 9.3e-109 397.5 308 64.3
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 6.0e-108 394.8 284 68.7
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 3.0e-107 392.5 261 70.9
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 1.5e-106 390.2 286 63.6
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 1.5e-106 390.2 235 77.9
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 1.5e-106 390.2 287 64.5
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 4.3e-106 388.7 286 63.6
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 4.3e-106 388.7 281 63.7
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 5.6e-106 388.3 286 63.6
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 5.6e-106 388.3 286 63.6
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 7.4e-106 387.9 286 62.6
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 2.8e-105 386.0 281 63.3
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 9.0e-104 380.9 379 51.5
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 5.8e-103 378.3 285 61.1
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 5.5e-101 371.7 283 62.5
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 3.5e-100 369.0 303 60.7
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.9e-98 363.2 288 60.8
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 1.0e-94 350.9 289 58.8
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.9e-93 346.7 285 59.6
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 7.9e-92 341.3 228 72.4
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.5e-90 336.3 283 59.7
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.3e-90 335.5 278 60.8
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 4.5e-87 325.5 462 45.0
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 1.3e-86 323.9 207 70.5
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 2.5e-85 319.7 285 54.7
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 2.5e-85 319.7 299 51.8
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 2.7e-84 316.2 284 55.6
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 3.6e-84 315.8 278 54.7
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 3.3e-82 309.3 258 61.2
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 3.1e-72 276.2 290 49.7
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.3e-72 275.4 289 50.5
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 7.7e-71 271.6 183 69.4
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 3.1e-64 249.6 341 40.8
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 7.7e-63 245.0 191 61.3
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 4.0e-59 232.6 201 59.7
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 8.5e-54 214.9 157 61.8
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 8.8e-51 204.9 173 55.5
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.6e-39 166.0 143 59.4
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 3.0e-38 163.3 107 66.4
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 6.2e-36 155.6 208 43.8
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 4.4e-34 149.4 126 56.3
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 3.7e-25 119.8 291 26.5
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 3.0e-22 110.2 66 77.3
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 1.5e-21 107.8 258 26.7
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 2.1e-20 104.0 71 73.2
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 6.4e-17 92.4 67 61.2
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.6e-13 79.3 51 74.5
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 1.9e-08 64.3 54 57.4


User provided reference genes

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