Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.9e-72 275.8 143 100.0
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.8e-59 232.6 120 98.3
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 7.7e-50 200.7 136 79.4
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 1.5e-48 196.4 149 73.2
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 8.0e-47 190.7 146 72.6
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 1.0e-46 190.3 149 73.8
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 4.4e-45 184.9 142 71.1
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 2.8e-44 182.2 128 74.2
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 8.3e-44 180.6 143 69.9
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 3.1e-43 178.7 143 69.9
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 4.1e-43 178.3 143 69.9
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 7.0e-43 177.6 147 68.0
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 7.0e-43 177.6 144 69.4
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 1.6e-42 176.4 138 68.8
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 1.6e-42 176.4 145 69.7
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.6e-42 176.4 142 66.2
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 2.0e-42 176.0 138 68.8
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 2.0e-42 176.0 124 73.4
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 2.7e-42 175.6 140 72.1
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 7.7e-42 174.1 143 69.2
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 1.0e-41 173.7 134 70.1
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 2.3e-41 172.6 148 64.9
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 2.3e-41 172.6 113 77.9
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 2.9e-41 172.2 139 69.1
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 3.8e-41 171.8 103 80.6
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 5.0e-41 171.4 142 69.0
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 6.5e-41 171.0 104 81.7
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 6.5e-41 171.0 143 68.5
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 8.6e-41 170.6 149 68.5
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 1.1e-40 170.2 149 68.5
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 1.1e-40 170.2 103 79.6
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 1.9e-40 169.5 148 65.5
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 2.5e-40 169.1 145 66.2
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 2.5e-40 169.1 145 66.2
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 4.2e-40 168.3 142 66.2
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 5.5e-40 167.9 112 74.1
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 5.5e-40 167.9 138 68.8
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 9.5e-40 167.2 142 64.8
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.1e-39 166.0 105 79.0
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 2.8e-39 165.6 143 63.6
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 4.7e-39 164.9 141 64.5
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 6.1e-39 164.5 105 80.0
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 6.1e-39 164.5 136 66.9
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 6.1e-39 164.5 140 63.6
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 1.0e-38 163.7 114 73.7
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 1.4e-38 163.3 131 65.6
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 1.4e-38 163.3 143 63.6
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 1.4e-38 163.3 98 81.6
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 1.8e-38 162.9 142 66.2
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.8e-38 162.9 100 78.0
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 2.3e-38 162.5 138 67.4
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 2.3e-38 162.5 122 70.5
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 2.3e-38 162.5 114 72.8
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 3.0e-38 162.2 102 78.4
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 4.0e-38 161.8 131 65.6
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 5.2e-38 161.4 128 65.6
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 6.8e-38 161.0 98 79.6
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 8.9e-38 160.6 142 62.7
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 8.9e-38 160.6 149 64.4
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 1.5e-37 159.8 101 78.2
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 2.0e-37 159.5 151 63.6
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 2.6e-37 159.1 103 76.7
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 2.6e-37 159.1 125 69.6
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 4.4e-37 158.3 131 64.9
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 5.7e-37 157.9 97 80.4
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 5.7e-37 157.9 135 65.9
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 9.8e-37 157.1 130 64.6
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 1.7e-36 156.4 100 79.0
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 3.7e-36 155.2 116 65.5
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 8.3e-36 154.1 134 64.9
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 1.1e-35 153.7 143 62.9
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 2.4e-35 152.5 112 69.6
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 3.1e-35 152.1 118 72.0
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 7.0e-35 151.0 139 60.4
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 1.6e-34 149.8 123 71.5
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 7.8e-34 147.5 101 70.3
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 5.0e-33 144.8 129 67.4
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 6.6e-33 144.4 117 70.1
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 1.1e-32 143.7 117 67.5
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 1.9e-32 142.9 114 72.8
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 1.9e-32 142.9 105 66.7
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 2.1e-31 139.4 119 66.4
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 1.8e-30 136.3 117 64.1
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 3.0e-30 135.6 156 55.8
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 5.2e-30 134.8 79 83.5
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 1.5e-29 133.3 110 64.5
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 2.0e-29 132.9 94 67.0
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 2.6e-29 132.5 143 51.7
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 2.6e-29 132.5 102 61.8
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 7.5e-29 131.0 78 82.1
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.7e-28 129.8 79 79.7
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 2.2e-28 129.4 80 77.5
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 3.7e-28 128.6 93 61.3
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 1.8e-27 126.3 113 63.7
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 5.4e-27 124.8 94 70.2
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 9.2e-27 124.0 111 55.0
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 1.0e-25 120.6 115 58.3
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 3.3e-24 115.5 104 54.8
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 2.1e-23 112.8 92 59.8
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 6.8e-22 107.8 65 76.9
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 7.8e-18 94.4 110 50.0
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 1.9e-16 89.7 52 82.7
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 4.0e-14 82.0 96 57.3
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 1.7e-12 76.6 135 37.8
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 1.1e-11 73.9 79 60.8
Cre07.g357300 Chlamydomonas reinhardtii HOM05D007294 ORTHO05D009205 2.4e-11 72.8 106 34.9
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 2.1e-10 69.7 46 71.7
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 9.5e-08 60.8 109 40.4


User provided reference genes

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