Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025251 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 1.1e-99 366.7 189 100.0
CSS0004859 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 6.8e-54 214.5 166 74.1
CSS0017210 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 6.8e-54 214.5 166 74.1
Actinidia34077 Actinidia chinensis HOM05D005596 ORTHO05D006994 7.1e-51 204.5 166 71.1
QL09p015812 Quercus lobata HOM05D005596 ORTHO05D006994 5.6e-48 194.9 165 66.7
Potri.012G133900 Populus trichocarpa HOM05D005596 ORTHO05D006994 1.2e-47 193.7 166 65.7
Hma1.2p1_0099F.1_g048580 Hydrangea macrophylla HOM05D005596 ORTHO05D006994 2.8e-47 192.6 166 66.3
QL09p016060 Quercus lobata HOM05D005596 ORTHO05D006994 2.8e-47 192.6 165 66.1
Rhsim03G0176700 Rhododendron simsii HOM05D005596 ORTHO05D006994 3.6e-47 192.2 166 68.7
Cfa008276 Carpinus fangiana HOM05D005596 ORTHO05D006994 1.8e-46 189.9 165 64.8
vmacro06733 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 3.1e-46 189.1 166 65.1
Sabra12G0100700 Salix brachista HOM05D005596 ORTHO05D006994 4.0e-46 188.7 166 63.9
CiPaw.03G102200 Carya illinoinensis HOM05D005596 ORTHO05D006994 4.4e-45 185.3 165 64.8
Manes.06G143300 Manihot esculenta HOM05D005596 ORTHO05D006994 7.6e-45 184.5 166 63.3
Lj8A29T43 Lonicera japonica HOM05D005596 ORTHO05D006994 2.2e-44 183.0 165 63.0
GSVIVG01010628001 Vitis vinifera HOM05D005596 ORTHO05D006994 2.2e-44 183.0 165 64.2
Prupe.2G289700 Prunus persica HOM05D005596 ORTHO05D006994 2.9e-44 182.6 166 65.1
FvH4_7g28970 Fragaria vesca HOM05D005596 ORTHO05D006994 8.4e-44 181.0 165 64.2
CANSAT21G1758 Cannabis sativa HOM05D005596 ORTHO05D006994 1.4e-43 180.3 165 65.5
TWI39G0482 Tripterygium wilfordii HOM05D005596 ORTHO05D006994 1.4e-43 180.3 165 64.2
Atru.chr1.530 Acer truncatum HOM05D005596 ORTHO05D006994 4.2e-43 178.7 162 65.4
Ciclev10005112m.g Citrus clementina HOM05D005596 ORTHO05D006994 1.2e-42 177.2 165 63.0
Haze_13762 Corylus avellana HOM05D005596 ORTHO05D006994 1.6e-42 176.8 158 63.9
Gohir.A09G039400 Gossypium hirsutum HOM05D005596 ORTHO05D006994 2.7e-42 176.0 167 62.3
Glyma.10G239200 Glycine max HOM05D005596 ORTHO05D006994 3.5e-42 175.6 165 60.6
Lalb_Chr06g0160971 Lupinus albus HOM05D005596 ORTHO05D006994 3.5e-42 175.6 165 60.0
RcHm_v2.0_Chr1g0376671 Rosa chinensis HOM05D005596 ORTHO05D006994 3.5e-42 175.6 165 63.0
FAN01G2242 Fragaria x ananassa HOM05D005596 ORTHO05D006994 4.6e-42 175.3 165 62.4
Thecc.03G170100 Theobroma cacao HOM05D005596 ORTHO05D006994 4.6e-42 175.3 166 62.7
FAN10G2089 Fragaria x ananassa HOM05D005596 ORTHO05D006994 7.8e-42 174.5 176 60.8
FAN10G3222 Fragaria x ananassa HOM05D005596 ORTHO05D006994 7.8e-42 174.5 176 60.8
TAR375G0353 Trochodendron aralioides HOM05D005596 ORTHO05D006994 7.8e-42 174.5 166 62.0
Lsat_1_v5_gn_8_7641 Lactuca sativa HOM05D005596 ORTHO05D006994 1.0e-41 174.1 165 61.2
MD01G1196400 Malus domestica HOM05D005596 ORTHO05D006994 1.0e-41 174.1 164 62.8
Eucgr.K00221 Eucalyptus grandis HOM05D005596 ORTHO05D006994 1.3e-41 173.7 165 60.0
Phvul.007G066540 Phaseolus vulgaris HOM05D005596 ORTHO05D006994 1.7e-41 173.3 166 60.2
Duzib205G1479 Durio zibethinus HOM05D005596 ORTHO05D006994 2.3e-41 172.9 160 63.1
FAN06G1108 Fragaria x ananassa HOM05D005596 ORTHO05D006994 3.0e-41 172.6 176 60.2
FAN06G4254 Fragaria x ananassa HOM05D005596 ORTHO05D006994 3.0e-41 172.6 176 60.2
FAN03G2823 Fragaria x ananassa HOM05D005596 ORTHO05D006994 3.9e-41 172.2 176 60.2
Peaxi162Scf00648g00016 Petunia axillaris HOM05D005596 ORTHO05D006994 5.1e-41 171.8 166 59.0
Ca_10798_v3 Cicer arietinum L. HOM05D005596 ORTHO05D006994 6.6e-41 171.4 167 59.3
Gohir.D09G040500 Gossypium hirsutum HOM05D005596 ORTHO05D006994 6.6e-41 171.4 167 61.1
Gorai.006G046300 Gossypium raimondii HOM05D005596 ORTHO05D006994 6.6e-41 171.4 167 61.1
FAN03G1867 Fragaria x ananassa HOM05D005596 ORTHO05D006994 8.7e-41 171.0 176 59.7
Nn6g34264 Nelumbo nucifera HOM05D005596 ORTHO05D006994 2.5e-40 169.5 165 61.8
Nitab4.5_0002394g0030 Nicotiana tabacum HOM05D005596 ORTHO05D006994 4.3e-40 168.7 166 57.2
Oeu022544.2 Olea europaea HOM05D005596 ORTHO05D006994 5.6e-40 168.3 165 60.0
Cc02_g03410 Coffea canephora HOM05D005596 ORTHO05D006994 7.3e-40 167.9 165 58.8
CAN.G548.11 Capsicum annuum HOM05D005596 ORTHO05D006994 9.6e-40 167.5 190 53.2
ECA233G5181 Erigeron canadensis HOM05D005596 ORTHO05D006994 9.6e-40 167.5 165 58.2
Nitab4.5_0001083g0020 Nicotiana tabacum HOM05D005596 ORTHO05D006994 9.6e-40 167.5 166 56.6
Psat6g200160 Pisum sativum HOM05D005596 ORTHO05D006994 1.2e-39 167.2 189 52.4
MSTRG.8768 Avicennia marina HOM05D005596 ORTHO05D006994 2.8e-39 166.0 163 60.7
PGSC0003DMG400014264 Solanum tuberosum HOM05D005596 ORTHO05D006994 3.6e-39 165.6 190 53.7
ClCG05G007790 Citrullus lanatus HOM05D005596 ORTHO05D006994 4.7e-39 165.2 158 61.4
MELO3C006872.2 Cucumis melo HOM05D005596 ORTHO05D006994 6.2e-39 164.9 162 60.5
vmacro06726 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 6.2e-39 164.9 128 69.5
DCAR_018164 Daucus carota HOM05D005596 ORTHO05D006994 1.1e-38 164.1 165 58.8
Solyc03g026260.3 Solanum lycopersicum HOM05D005596 ORTHO05D006994 1.1e-38 164.1 190 52.6
Sopen03g005130 Solanum pennellii HOM05D005596 ORTHO05D006994 1.1e-38 164.1 190 52.6
Medtr1g101540 Medicago truncatula HOM05D005596 ORTHO05D006994 1.8e-38 163.3 165 56.4
CsaV3_3G016780 Cucumis sativus L. HOM05D005596 ORTHO05D006994 2.4e-38 162.9 162 59.9
LjContig00238g0007789 Lotus japonicus HOM05D005596 ORTHO05D006994 3.1e-38 162.5 164 58.5
AUR62016035 Chenopodium quinoa HOM05D005596 ORTHO05D006994 9.0e-38 161.0 165 58.2
Sed0010012 Sechium edule HOM05D005596 ORTHO05D006994 2.6e-37 159.5 162 58.6
HanXRQChr13g0405601 Helianthus annuus HOM05D005596 ORTHO05D006994 3.4e-37 159.1 166 58.4
Hund04701 Selenicereus undatus HOM05D005596 ORTHO05D006994 3.4e-37 159.1 164 59.8
AUR62021241 Chenopodium quinoa HOM05D005596 ORTHO05D006994 4.4e-37 158.7 165 57.0
arahy.Tifrunner.gnm1.ann1.8H8JUA Arachis hypogaea HOM05D005596 ORTHO05D006994 7.6e-37 157.9 166 56.0
PSO782G2992 Papaver somniferum HOM05D005596 ORTHO05D006994 2.2e-36 156.4 167 58.1
Eucgr.K00218 Eucalyptus grandis HOM05D005596 ORTHO05D006994 2.9e-36 156.0 158 58.2
Migut.F00380 Erythranthe guttata HOM05D005596 ORTHO05D006994 3.8e-36 155.6 159 60.4
Cpa.g.sc107.2 Carica papaya HOM05D005596 ORTHO05D006994 6.4e-36 154.8 163 55.2
PSO478G4610 Papaver somniferum HOM05D005596 ORTHO05D006994 8.4e-36 154.5 167 57.5
EL10Ac5g12249 Beta vulgaris HOM05D005596 ORTHO05D006994 1.1e-35 154.1 128 65.6
PGR142G4172 Punica granatum HOM05D005596 ORTHO05D006994 1.9e-35 153.3 166 56.6
THA.LOC104811480 Tarenaya hassleriana HOM05D005596 ORTHO05D006994 1.9e-35 153.3 190 52.1
SGA_v2.0_scaffold2G01084 Striga asiatica HOM05D005596 ORTHO05D006994 5.4e-35 151.8 163 57.1
Aa31LG3G8420 Aethionema arabicum HOM05D005596 ORTHO05D006994 9.3e-35 151.0 165 55.8
MBI12_g25031_MAGBIO Magnolia biondii HOM05D005596 ORTHO05D006994 1.6e-34 150.2 167 55.7
SalBow4G2853 Salvia bowleyana HOM05D005596 ORTHO05D006994 1.6e-34 150.2 163 56.4
AL8G26370 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 2.7e-34 149.4 164 56.1
BcaC03g14556 Brassica carinata HOM05D005596 ORTHO05D006994 6.0e-34 148.3 167 55.1
C02p20060 Brassica napus HOM05D005596 ORTHO05D006994 6.0e-34 148.3 167 55.1
AT5G52030 Arabidopsis thaliana HOM05D005596 ORTHO05D006994 7.8e-34 147.9 164 56.1
A02p12010 Brassica napus HOM05D005596 ORTHO05D006994 7.8e-34 147.9 167 55.1
BolC2t08136H Brassica oleracea HOM05D005596 ORTHO05D006994 7.8e-34 147.9 167 55.1
BraA02t06264Z Brassica rapa HOM05D005596 ORTHO05D006994 7.8e-34 147.9 167 55.1
Actinidia32899 Actinidia chinensis HOM05D005596 ORTHO05D006994 2.3e-33 146.4 166 53.6
Carub.0008s1212 Capsella rubella HOM05D005596 ORTHO05D006994 2.3e-33 146.4 164 56.1
CARHR264970 Cardamine hirsuta HOM05D005596 ORTHO05D006994 3.0e-33 146.0 167 54.5
BcaB05g23951 Brassica carinata HOM05D005596 ORTHO05D006994 5.1e-33 145.2 167 53.9
Sp6g14270 Schrenkiella parvula HOM05D005596 ORTHO05D006994 2.5e-32 142.9 167 53.9
Actinidia28519 Actinidia chinensis HOM05D005596 ORTHO05D006994 3.3e-32 142.5 93 76.3
Thhalv10013712m.g Eutrema salsugineum HOM05D005596 ORTHO05D006994 3.3e-32 142.5 167 54.5
CDE11G1004 Ceratophyllum demersum HOM05D005596 ORTHO05D006994 9.6e-32 141.0 182 49.5
unitig_0.g2489 Utricularia gibba HOM05D005596 ORTHO05D006994 1.7e-28 130.2 150 53.3
Os08g0545700 Oryza sativa ssp. japonica HOM05D005596 ORTHO05D006994 2.9e-28 129.4 166 50.0
VMungo0720G0093 Vigna mungo HOM05D005596 ORTHO05D006994 1.1e-27 127.5 134 56.7
ATR0757G105 Amborella trichopoda HOM05D005596 ORTHO05D006994 1.9e-27 126.7 165 46.7
Sc25g0000360 Simmondsia chinensis HOM05D005596 ORTHO05D006994 3.5e-26 122.5 93 68.8
Zm00001eb037540 Zea mays HOM05D005596 ORTHO05D006994 4.6e-26 122.1 164 47.6
TPR.G17416 Trifolium pratense HOM05D005596 ORTHO05D006994 8.7e-25 117.9 133 52.6
vmacro14494 Vaccinium macrocarpon HOM05D005596 ORTHO05D001545 3.4e-21 105.9 74 73.0
Pp3c25_14680 Physcomitrium patens HOM05D005596 ORTHO05D006994 1.3e-17 94.0 128 43.0
Medtr4g088945 Medicago truncatula HOM05D000054 ORTHO05D259780 1.5e-16 90.5 118 44.9
Mapoly0043s0066 Marchantia polymorpha HOM05D005596 ORTHO05D006994 5.6e-16 88.6 151 37.7
EL10Ac3g05686 Beta vulgaris HOM05D005596 ORTHO05D006994 6.2e-15 85.1 165 39.4
CBR_g7940 Chara braunii HOM05D000019 ORTHO05D000048 6.2e-15 85.1 155 36.1
arahy.Tifrunner.gnm1.ann1.EY18QM Arachis hypogaea HOM05D005596 ORTHO05D006994 1.0e-09 67.8 93 50.5
AagrBONN_evm.TU.Sc2ySwM_344.2862 Anthoceros agrestis HOM05D005596 ORTHO05D006994 1.8e-09 67.0 83 45.8
Cre16.g677800 Chlamydomonas reinhardtii HOM05D005596 ORTHO05D006994 1.8e-09 67.0 113 37.2
MD07G1263300 Malus domestica HOM05D005596 ORTHO05D006994 1.8e-09 67.0 47 68.1
CiPaw.01G039000 Carya illinoinensis HOM05D005596 ORTHO05D006994 1.5e-08 63.9 101 42.6
HPP92_020336 Vanilla planifolia HOM05D005596 ORTHO05D006994 1.3e-07 60.8 120 37.5
Dinv28492 Davidia involucrata HOM05D005596 ORTHO05D006994 6.3e-07 58.5 63 57.1


User provided reference genes

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