Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025247 Camellia sinensis var. sinensis HOM05D031489 ORTHO05D111148 4.4e-32 140.6 66 100.0
CSS0035738 Camellia sinensis var. sinensis HOM05D031489 ORTHO05D109079 1.6e-29 132.1 66 93.9
CSS0044561 Camellia sinensis var. sinensis HOM05D031489 ORTHO05D109581 4.5e-29 130.6 66 92.4
CSS0031683 Camellia sinensis var. sinensis HOM05D031489 ORTHO05D111031 1.5e-27 125.6 61 95.1
CSS0008975 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D013818 6.8e-17 90.1 42 95.2
CSS0019000 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D013818 2.0e-16 88.6 43 88.4
CSS0002994 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D013818 5.7e-16 87.0 42 92.9
CSS0010404 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D013818 5.7e-16 87.0 42 90.5
CSS0047111 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D013818 6.3e-15 83.6 43 86.0
CSS0043136 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D000055 2.5e-11 71.6 35 91.4
CSS0044532 Camellia sinensis var. sinensis HOM05D000066 ORTHO05D000055 5.6e-11 70.5 35 88.6
Dinv38219 Davidia involucrata HOM05D000066 ORTHO05D000055 2.4e-06 55.1 37 62.2
SalBow3G1875 Salvia bowleyana HOM05D000066 ORTHO05D000055 3.2e-06 54.7 37 64.9
AL9U11190 Arabidopsis lyrata HOM05D000066 ORTHO05D000055 4.1e-06 54.3 40 57.5
Phvul.008G129100 Phaseolus vulgaris HOM05D000066 ORTHO05D000055 4.1e-06 54.3 46 50.0
Manes.03G146800 Manihot esculenta HOM05D000066 ORTHO05D000055 5.4e-06 53.9 37 59.5
Nitab4.5_0002641g0150 Nicotiana tabacum HOM05D000066 ORTHO05D000055 7.0e-06 53.5 35 68.6
Manes.13G046500 Manihot esculenta HOM05D000066 ORTHO05D000055 9.2e-06 53.1 35 62.9
SMO146G0030 Selaginella moellendorffii HOM05D000066 ORTHO05D001011 9.2e-06 53.1 37 62.2
TPR.G31306 Trifolium pratense HOM05D000066 ORTHO05D000055 9.2e-06 53.1 39 56.4


User provided reference genes

Program Settings