Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025210 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 8.7e-69 263.5 129 100.0
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 2.8e-51 205.3 125 82.4
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 3.2e-47 191.8 125 75.2
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 5.5e-47 191.0 125 75.2
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 1.2e-46 189.9 127 71.7
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 1.2e-46 189.9 101 88.1
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 1.2e-46 189.9 125 72.8
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 4.7e-46 188.0 123 74.0
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 3.0e-45 185.3 123 72.4
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 3.0e-45 185.3 101 87.1
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 4.0e-45 184.9 125 71.2
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 3.3e-44 181.8 126 69.0
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 7.5e-44 180.6 127 71.7
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 9.7e-44 180.3 125 69.6
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 3.7e-43 178.3 127 67.7
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 4.8e-43 177.9 125 68.0
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 6.3e-43 177.6 100 84.0
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 6.3e-43 177.6 100 84.0
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 8.2e-43 177.2 132 68.2
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 8.2e-43 177.2 132 68.2
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 1.1e-42 176.8 125 67.2
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 1.4e-42 176.4 130 70.8
Peaxi162Scf00175g00121 Petunia axillaris HOM05D001391 ORTHO05D005432 1.8e-42 176.0 125 67.2
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 1.8e-42 176.0 116 70.7
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 4.1e-42 174.9 125 67.2
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 5.3e-42 174.5 126 69.0
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 5.3e-42 174.5 126 69.0
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 2.0e-41 172.6 125 68.8
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 3.5e-41 171.8 125 66.4
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 4.5e-41 171.4 138 63.8
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 5.9e-41 171.0 125 64.8
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 7.7e-41 170.6 115 72.2
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 1.0e-40 170.2 117 68.4
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 1.3e-40 169.9 127 67.7
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 1.7e-40 169.5 124 66.1
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 3.8e-40 168.3 126 65.9
CDE02G0606 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 5.0e-40 167.9 116 69.8
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 1.1e-39 166.8 153 56.9
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 1.1e-39 166.8 125 64.8
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 2.5e-39 165.6 121 65.3
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 2.5e-39 165.6 125 61.6
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 3.2e-39 165.2 113 69.9
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 4.2e-39 164.9 123 65.9
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 7.2e-39 164.1 113 69.9
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 9.4e-39 163.7 90 78.9
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 1.2e-38 163.3 114 69.3
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 1.6e-38 162.9 129 61.2
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 2.1e-38 162.5 125 64.8
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 2.1e-38 162.5 125 63.2
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 2.7e-38 162.2 128 63.3
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 4.7e-38 161.4 114 68.4
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 8.0e-38 160.6 102 70.6
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 1.0e-37 160.2 80 87.5
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 1.4e-37 159.8 85 88.2
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.4e-37 159.8 130 62.3
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 1.8e-37 159.5 125 60.0
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 1.8e-37 159.5 125 64.8
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 1.8e-37 159.5 125 64.8
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 4.0e-37 158.3 125 63.2
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 5.2e-37 157.9 99 70.7
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 5.2e-37 157.9 126 61.1
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 5.2e-37 157.9 126 63.5
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 5.2e-37 157.9 83 83.1
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 5.2e-37 157.9 126 59.5
Thecc.02G331800 Theobroma cacao HOM05D001391 ORTHO05D005432 5.2e-37 157.9 126 61.9
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 6.8e-37 157.5 125 62.4
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 6.8e-37 157.5 125 62.4
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 6.8e-37 157.5 125 62.4
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 6.8e-37 157.5 127 63.8
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 8.8e-37 157.1 102 69.6
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 8.8e-37 157.1 126 64.3
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 8.8e-37 157.1 125 62.4
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 8.8e-37 157.1 125 62.4
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 1.2e-36 156.8 126 65.1
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 1.5e-36 156.4 84 79.8
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 1.5e-36 156.4 126 63.5
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 4.4e-36 154.8 125 60.0
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 4.4e-36 154.8 132 59.1
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 4.4e-36 154.8 125 61.6
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 5.7e-36 154.5 125 64.0
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 5.7e-36 154.5 126 63.5
Eucgr.B03155 Eucalyptus grandis HOM05D001391 ORTHO05D005432 7.5e-36 154.1 83 78.3
Gohir.A13G082200 Gossypium hirsutum HOM05D001391 ORTHO05D005432 7.5e-36 154.1 125 62.4
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 9.8e-36 153.7 125 60.8
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 9.8e-36 153.7 125 60.8
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 9.8e-36 153.7 125 60.8
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 9.8e-36 153.7 125 60.8
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 9.8e-36 153.7 120 60.8
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 1.7e-35 152.9 100 72.0
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 2.8e-35 152.1 98 73.5
Hund25181 Selenicereus undatus HOM05D001391 ORTHO05D005432 2.8e-35 152.1 128 61.7
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 3.7e-35 151.8 125 60.8
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 6.3e-35 151.0 125 62.4
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 6.3e-35 151.0 127 59.1
Gorai.008G177400 Gossypium raimondii HOM05D001391 ORTHO05D005432 8.3e-35 150.6 85 76.5
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 8.3e-35 150.6 126 60.3
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 1.1e-34 150.2 127 62.2
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.4e-34 149.1 125 60.0
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.4e-34 149.1 125 60.0
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 4.1e-34 148.3 125 59.2
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 4.1e-34 148.3 126 62.7
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 4.1e-34 148.3 86 75.6
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 4.1e-34 148.3 100 72.0
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 5.4e-34 147.9 97 67.0
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 1.6e-33 146.4 125 58.4
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 1.6e-33 146.4 88 73.9
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 2.7e-33 145.6 125 59.2
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 2.7e-33 145.6 141 57.4
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 4.5e-33 144.8 83 78.3
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 4.5e-33 144.8 82 76.8
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 1.7e-32 142.9 128 60.2
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 1.7e-32 142.9 127 59.8
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 2.3e-32 142.5 83 74.7
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 2.9e-32 142.1 129 59.7
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 5.0e-32 141.4 114 61.4
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 1.1e-31 140.2 103 64.1
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 3.2e-31 138.7 96 68.8
QL01p050908 Quercus lobata HOM05D001391 ORTHO05D005432 2.8e-30 135.6 144 52.1
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 4.7e-30 134.8 84 71.4
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 1.0e-29 133.7 110 60.9
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 2.3e-29 132.5 123 57.7
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 4.0e-29 131.7 108 60.2
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 4.0e-29 131.7 108 60.2
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 4.4e-28 128.3 103 62.1
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 5.7e-28 127.9 69 79.7
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 7.5e-28 127.5 93 64.5
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 1.7e-27 126.3 125 52.0
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 1.7e-27 126.3 94 63.8
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 1.2e-25 120.2 108 59.3
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 1.6e-25 119.8 107 61.7
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 1.6e-25 119.8 71 73.2
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 4.5e-25 118.2 97 56.7
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 1.5e-23 113.2 68 76.5
SEGI_10839 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.8e-18 96.3 73 61.6
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 3.2e-18 95.5 84 57.1
Os03g0421400 Oryza sativa ssp. japonica HOM05D001391 ORTHO05D005432 9.2e-18 94.0 92 55.4
SEGI_38290 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.7e-16 89.7 56 67.9
MD16G1164500 Malus domestica HOM05D001391 ORTHO05D005432 6.6e-16 87.8 54 72.2
Mapoly0004s0019 Marchantia polymorpha HOM05D001391 ORTHO05D005432 8.3e-11 70.9 67 40.3
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 1.6e-09 66.6 38 73.7
Eucgr.B03159 Eucalyptus grandis HOM05D001391 ORTHO05D005432 2.0e-09 66.2 38 76.3
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 2.5e-07 59.3 125 39.2


User provided reference genes

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