Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1706.8 896 100.0
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1705.3 896 99.9
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 0.0e+00 1284.2 905 77.0
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1280.8 906 77.2
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 0.0e+00 1280.0 906 77.0
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 0.0e+00 1243.4 904 75.8
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 0.0e+00 1242.6 900 76.2
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 0.0e+00 1226.1 910 73.5
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 0.0e+00 1179.1 905 72.7
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 0.0e+00 1151.7 874 71.6
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 0.0e+00 1150.6 899 71.0
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 0.0e+00 1090.5 904 66.6
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 0.0e+00 1080.1 774 76.5
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 0.0e+00 1080.1 904 65.7
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 2.1e-310 1068.9 904 66.5
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 2.5e-308 1062.0 904 64.8
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 1.1e-303 1046.6 903 65.1
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 5.1e-301 1037.7 907 64.2
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 7.4e-300 1033.9 903 65.3
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 1.7e-299 1032.7 907 64.1
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 4.1e-298 1028.1 906 64.6
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 6.9e-298 1027.3 901 64.4
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 8.5e-296 1020.4 912 64.5
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 5.5e-295 1017.7 906 61.9
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 5.5e-295 1017.7 912 62.6
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.7e-294 1015.4 912 64.4
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 5.1e-293 1011.1 906 61.6
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 8.2e-291 1003.8 906 63.6
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 1.1e-290 1003.4 900 64.0
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.8e-288 995.0 906 62.8
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 1.1e-287 993.4 906 62.6
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 5.5e-287 991.1 903 62.5
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 6.3e-283 977.6 859 65.3
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 2.4e-282 975.7 907 60.7
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 5.3e-282 974.5 905 61.4
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 5.9e-281 971.1 857 64.1
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 5.9e-281 971.1 862 65.4
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.0e-280 970.3 907 60.7
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 3.8e-280 968.4 888 62.3
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.5e-276 956.4 896 60.4
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 2.0e-276 956.1 905 60.3
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 3.7e-275 951.8 903 61.5
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.1e-271 940.3 904 59.5
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 8.0e-270 934.1 899 61.2
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 8.8e-269 930.6 912 59.6
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.0e-268 929.5 906 60.0
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.4e-266 922.5 905 60.2
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 7.0e-266 921.0 903 59.0
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 1.7e-264 916.4 920 59.7
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 2.9e-264 915.6 920 59.7
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 1.1e-263 913.7 908 59.0
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.9e-263 912.9 916 58.3
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 2.5e-263 912.5 904 58.6
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 4.7e-262 908.3 802 63.8
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 8.0e-262 907.5 904 59.1
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 1.0e-261 907.1 901 59.2
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 1.0e-261 907.1 904 57.1
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 4.0e-261 905.2 908 59.5
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 8.9e-261 904.0 896 60.2
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 5.7e-260 901.4 906 60.2
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 1.8e-258 896.3 907 57.8
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 5.4e-258 894.8 895 59.9
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 9.2e-258 894.0 895 59.9
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.7e-257 892.5 895 59.9
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 1.5e-255 886.7 902 58.5
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 5.6e-255 884.8 920 56.8
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 9.5e-255 884.0 890 58.4
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 1.6e-254 883.2 904 59.0
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 2.1e-254 882.9 898 58.0
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 4.7e-254 881.7 920 57.9
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 5.2e-253 878.2 793 63.2
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 5.2e-253 878.2 793 63.2
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 5.2e-253 878.2 882 56.0
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 6.8e-253 877.9 913 57.2
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 8.9e-253 877.5 904 57.1
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 7.5e-252 874.4 901 57.8
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 4.9e-251 871.7 919 56.8
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 4.9e-251 871.7 919 56.8
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 5.0e-248 861.7 911 57.5
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 8.6e-248 860.9 889 57.7
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 8.6e-248 860.9 899 57.4
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 1.1e-247 860.5 902 57.1
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.2e-246 857.1 906 57.6
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 6.2e-246 854.7 887 58.3
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 3.4e-244 849.0 856 58.1
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 7.5e-244 847.8 860 58.1
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.7e-243 846.7 908 58.3
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 8.3e-243 844.3 915 56.1
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 1.2e-241 840.5 903 55.3
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 6.6e-240 834.7 904 56.2
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 2.5e-239 832.8 906 56.3
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 1.6e-238 830.1 887 57.4
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 4.7e-238 828.6 887 57.4
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 6.2e-238 828.2 862 57.5
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.5e-236 823.5 836 56.6
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 2.0e-236 823.2 857 57.3
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 2.4e-234 816.2 843 57.9
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 5.4e-234 815.1 910 53.2
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 1.3e-232 810.4 860 55.9
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 8.6e-232 807.7 907 53.8
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 1.5e-231 807.0 909 55.1
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 9.6e-231 804.3 846 57.7
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 1.3e-227 793.9 905 53.8
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 1.3e-227 793.9 904 54.4
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.7e-227 793.5 864 57.6
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 2.5e-223 779.6 911 54.9
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 9.6e-223 777.7 906 54.2
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 1.6e-222 776.9 876 54.6
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 1.7e-219 766.9 841 56.6
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.4e-218 763.8 911 53.3
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 8.7e-216 754.6 861 53.3
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 5.8e-212 741.9 778 56.0
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 2.0e-204 716.8 901 51.2
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 3.4e-204 716.1 733 58.5
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 1.4e-202 710.7 929 50.8
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 4.2e-202 709.1 900 50.1
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 9.6e-199 698.0 903 49.5
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.8e-197 693.7 909 48.7
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 5.3e-197 692.2 882 50.0
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 2.6e-196 689.9 914 48.2
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 3.0e-192 676.4 846 50.8
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 2.8e-190 669.8 851 49.8
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 4.8e-190 669.1 791 52.6
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 1.7e-187 660.6 917 49.2
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.8e-187 659.4 886 48.4
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 8.5e-187 658.3 886 49.4
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 8.5e-187 658.3 876 50.3
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 1.9e-186 657.1 915 48.7
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 4.2e-186 656.0 889 47.2
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 4.6e-185 652.5 878 49.5
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 7.7e-180 635.2 864 49.5
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 6.5e-179 632.1 879 49.0
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 5.5e-178 629.0 880 48.9
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 1.6e-177 627.5 880 48.8
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 3.0e-176 623.2 862 49.1
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 1.7e-171 607.4 900 47.1
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 3.2e-170 603.2 880 47.3
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 1.8e-168 597.4 905 47.1
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.8e-166 590.1 918 45.0
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 3.1e-165 586.6 773 50.1
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 1.9e-162 577.4 764 49.1
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 2.7e-161 573.5 897 46.3
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 2.7e-161 573.5 900 46.2
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 7.5e-159 565.5 888 45.6
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 1.8e-157 560.8 769 48.1
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 2.8e-153 547.0 848 46.0
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 2.2e-150 537.3 748 48.7
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 4.5e-148 529.6 851 45.5
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 6.4e-142 509.2 908 44.2
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 2.7e-132 477.2 754 48.0
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 4.9e-126 456.4 459 57.5
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 1.1e-125 455.3 751 46.2
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.6e-121 441.4 914 39.5
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.7e-116 424.1 646 47.8
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 4.4e-111 406.8 939 39.5
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 1.1e-109 402.1 901 36.6
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 5.6e-106 389.8 937 37.1
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 9.6e-106 389.0 930 38.7
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 2.1e-105 387.9 406 56.9
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 2.0e-103 381.3 789 38.5
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 4.0e-96 357.1 919 36.8
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 5.8e-95 353.2 927 36.7
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 1.3e-91 342.0 933 34.3
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 2.4e-88 331.3 873 36.5
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 6.0e-84 316.6 1011 32.6
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 7.4e-82 309.7 422 50.9
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 1.8e-75 288.5 355 48.2
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 4.5e-71 273.9 506 42.1
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 3.7e-65 254.2 379 45.6
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 4.1e-64 250.8 309 47.2
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 3.0e-59 234.6 258 53.9
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 6.7e-59 233.4 294 46.6
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.9e-53 215.3 1109 28.7
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 6.1e-52 210.3 915 30.4
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 4.0e-51 207.6 485 36.1
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.4e-48 199.1 345 39.7
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 9.1e-48 196.4 794 29.6
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 1.2e-47 196.1 262 54.6
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.4e-43 182.6 288 41.0
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.8e-43 182.2 141 61.7
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 5.7e-42 177.2 97 93.8
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.7e-38 165.6 109 74.3
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.3e-21 107.8 213 36.6
unitig_27.g24881 Utricularia gibba HOM05D003671 ORTHO05D004285 4.6e-07 61.2 65 49.2
SEGI_26240 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.9e-06 58.2 491 23.4


User provided reference genes

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