Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 7.7e-36 153.3 78 100.0
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 3.4e-23 111.3 66 83.3
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 1.3e-22 109.4 66 81.8
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 2.8e-22 108.2 66 78.8
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 2.8e-22 108.2 68 76.5
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 3.7e-22 107.8 66 80.3
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 3.7e-22 107.8 66 78.8
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 6.3e-22 107.1 66 78.8
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 8.3e-22 106.7 66 80.3
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 1.1e-21 106.3 66 77.3
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 1.4e-21 105.9 67 77.6
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 1.8e-21 105.5 66 77.3
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 2.4e-21 105.1 66 78.8
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 3.1e-21 104.8 66 77.3
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 3.1e-21 104.8 66 78.8
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 3.1e-21 104.8 66 77.3
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 4.1e-21 104.4 66 75.8
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 4.1e-21 104.4 66 78.8
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 7.0e-21 103.6 66 78.8
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 7.0e-21 103.6 66 74.2
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 7.0e-21 103.6 66 75.8
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 9.1e-21 103.2 66 75.8
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 1.2e-20 102.8 66 77.3
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 2.7e-20 101.7 65 76.9
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 7.7e-20 100.1 64 76.6
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 7.7e-20 100.1 64 76.6
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 1.0e-19 99.8 67 76.1
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 1.0e-19 99.8 64 75.0
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 1.0e-19 99.8 66 69.7
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 1.3e-19 99.4 66 74.2
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 1.3e-19 99.4 67 74.6
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 2.3e-19 98.6 66 72.7
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 5.0e-19 97.4 67 73.1
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 5.0e-19 97.4 66 72.7
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 6.6e-19 97.1 67 74.6
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 6.6e-19 97.1 66 72.7
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 6.6e-19 97.1 68 69.1
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 8.6e-19 96.7 64 68.8
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 8.6e-19 96.7 64 68.8
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 1.9e-18 95.5 68 64.7
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 2.5e-18 95.1 71 62.0
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 4.2e-18 94.4 64 67.2
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 7.2e-18 93.6 64 70.3
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 7.2e-18 93.6 64 65.6
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 9.5e-18 93.2 64 70.3
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 9.5e-18 93.2 67 71.6
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 9.5e-18 93.2 66 68.2
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 1.2e-17 92.8 64 67.2
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 1.6e-17 92.4 63 66.7
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 2.1e-17 92.0 88 58.0
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.1e-17 92.0 68 63.2
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 2.8e-17 91.7 64 64.1
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 3.6e-17 91.3 66 65.2
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 4.7e-17 90.9 66 65.2
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 4.7e-17 90.9 65 63.1
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 6.1e-17 90.5 66 63.6
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 6.1e-17 90.5 66 63.6
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 8.0e-17 90.1 66 62.1
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 8.0e-17 90.1 66 63.6
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 8.0e-17 90.1 66 63.6
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 8.0e-17 90.1 66 63.6
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 8.0e-17 90.1 66 63.6
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 8.0e-17 90.1 66 63.6
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 8.0e-17 90.1 66 69.7
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 8.0e-17 90.1 66 63.6
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 1.0e-16 89.7 61 68.9
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 1.4e-16 89.4 65 63.1
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.8e-16 89.0 64 64.1
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 1.8e-16 89.0 66 60.6
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 2.3e-16 88.6 66 65.2
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.0e-16 88.2 64 64.1
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 2.0e-15 85.5 67 65.7
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 2.0e-15 85.5 64 62.5
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 3.4e-15 84.7 65 63.1
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 3.4e-15 84.7 65 63.1
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 4.4e-15 84.3 65 61.5
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 4.4e-15 84.3 65 61.5
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 4.4e-15 84.3 64 62.5
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 5.7e-15 84.0 64 62.5
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 5.7e-15 84.0 62 64.5
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 7.5e-15 83.6 64 62.5
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 2.2e-14 82.0 62 62.9
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 2.9e-14 81.6 64 59.4
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 4.9e-14 80.9 64 59.4
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 1.4e-13 79.3 40 100.0
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 2.4e-13 78.6 59 69.5
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 9.2e-13 76.6 63 57.1
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 7.8e-12 73.6 43 76.7
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 1.7e-11 72.4 42 76.2
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 8.6e-11 70.1 63 52.4
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 1.5e-10 69.3 60 53.3
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 1.9e-10 68.9 62 50.0
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 3.3e-10 68.2 79 49.4
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 1.6e-09 65.9 66 45.5
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 2.1e-09 65.5 41 78.0
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 4.7e-09 64.3 69 43.5
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 3.1e-08 61.6 40 75.0
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 3.1e-08 61.6 46 65.2
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 1.2e-07 59.7 46 63.0
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 5.8e-07 57.4 63 49.2
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 5.8e-07 57.4 41 65.9
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 2.9e-06 55.1 41 61.0
Hma1.2p1_0024F.1_g016010 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 4.9e-06 54.3 42 66.7


User provided reference genes

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