Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 9.2e-75 283.5 146 100.0
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.9e-72 275.8 146 97.9
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.9e-72 275.8 146 97.9
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.9e-72 275.8 146 97.9
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 9.6e-64 246.9 146 88.4
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 4.8e-63 244.6 146 87.0
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 4.0e-62 241.5 146 86.3
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 1.2e-61 240.0 146 87.0
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 5.8e-61 237.7 146 85.6
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 5.8e-61 237.7 146 85.6
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 1.3e-60 236.5 146 84.2
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 1.9e-59 232.6 146 86.3
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 1.9e-59 232.6 146 85.6
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 2.4e-59 232.3 146 86.3
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 5.4e-59 231.1 146 82.9
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 5.4e-59 231.1 146 82.9
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 7.1e-59 230.7 148 81.8
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 1.2e-58 229.9 146 82.9
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 2.7e-58 228.8 144 82.6
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.7e-58 228.8 144 82.6
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 2.7e-58 228.8 144 82.6
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.7e-58 228.8 146 83.6
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 4.6e-58 228.0 144 82.6
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 6.0e-58 227.6 144 81.9
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 7.9e-58 227.3 144 81.9
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 1.0e-57 226.9 147 82.3
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.3e-57 226.5 146 82.9
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 80.1
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 80.8
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.9e-57 224.9 147 83.0
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.9e-57 224.9 147 83.0
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 3.9e-57 224.9 146 78.8
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 8.7e-57 223.8 147 81.6
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 8.7e-57 223.8 147 80.3
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 1.1e-56 223.4 146 82.2
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 1.1e-56 223.4 146 80.1
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 1.1e-56 223.4 146 81.5
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 1.1e-56 223.4 147 83.0
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 1.9e-56 222.6 146 80.8
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 1.9e-56 222.6 147 80.3
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 1.9e-56 222.6 146 80.1
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.9e-56 222.6 146 78.8
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 1.9e-56 222.6 147 80.3
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 2.5e-56 222.2 146 80.1
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 4.3e-56 221.5 146 80.1
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 4.3e-56 221.5 146 79.5
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 4.3e-56 221.5 146 80.1
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 9.6e-56 220.3 146 82.9
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 1.3e-55 219.9 146 79.5
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 2.1e-55 219.2 147 79.6
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 2.1e-55 219.2 147 79.6
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 2.1e-55 219.2 147 79.6
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 2.1e-55 219.2 146 78.1
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 3.7e-55 218.4 146 78.8
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 4.8e-55 218.0 147 78.9
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 4.8e-55 218.0 146 78.8
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 6.2e-55 217.6 146 78.8
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 6.2e-55 217.6 147 78.9
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 6.2e-55 217.6 146 82.2
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 8.1e-55 217.2 146 80.8
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 8.1e-55 217.2 144 79.9
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.1e-54 216.9 147 80.3
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.1e-54 216.9 147 80.3
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 1.8e-54 216.1 145 79.3
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 3.1e-54 215.3 149 77.9
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.0e-54 214.9 147 79.6
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 6.9e-54 214.2 147 78.9
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 2.6e-53 212.2 147 76.9
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 4.5e-53 211.5 147 78.9
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 4.5e-53 211.5 147 75.5
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 4.5e-53 211.5 147 77.6
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 9.9e-53 210.3 137 80.3
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 1.3e-52 209.9 147 77.6
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 2.9e-52 208.8 147 76.9
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 6.4e-52 207.6 147 78.9
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 1.1e-51 206.8 147 76.2
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 1.4e-51 206.5 149 75.2
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 3.2e-51 205.3 145 74.5
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 5.5e-51 204.5 155 74.2
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 5.5e-51 204.5 147 71.4
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 7.9e-50 200.7 146 76.0
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 1.0e-49 200.3 146 76.0
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.7e-49 197.6 150 72.7
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.7e-49 197.6 150 72.7
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 1.1e-48 196.8 149 72.5
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 1.1e-48 196.8 139 76.3
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.6e-47 193.0 152 71.7
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.8e-47 192.2 139 77.0
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 2.8e-47 192.2 150 74.0
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 4.8e-47 191.4 152 71.7
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 1.4e-46 189.9 150 70.7
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 2.4e-46 189.1 154 69.5
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 4.0e-46 188.3 153 69.9
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 5.3e-46 188.0 150 68.0
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 9.0e-46 187.2 157 67.5
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.0e-45 186.0 146 71.2
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 2.6e-45 185.7 152 69.7
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.4e-45 185.3 146 71.2
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.4e-45 185.3 153 68.0
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 7.6e-45 184.1 115 83.5
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 7.6e-45 184.1 146 71.2
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 1.0e-44 183.7 154 68.2
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 1.9e-43 179.5 147 68.7
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 5.5e-43 177.9 147 68.0
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 7.4e-40 167.5 138 68.8
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 7.4e-40 167.5 138 68.8
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 7.4e-40 167.5 152 63.2
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 2.2e-39 166.0 145 65.5
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.2e-39 166.0 109 82.6
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 8.2e-39 164.1 149 61.1
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 6.9e-38 161.0 111 80.2
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 3.4e-37 158.7 161 57.1
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 7.7e-37 157.5 105 78.1
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.7e-36 156.4 149 61.7
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 1.4e-35 153.3 100 80.0
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 7.2e-35 151.0 147 61.2
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 2.1e-34 149.4 146 59.6
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 2.1e-34 149.4 150 58.7
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.8e-30 136.3 102 72.5
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 2.4e-30 136.0 102 72.5
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 6.9e-30 134.4 152 54.6
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 2.2e-28 129.4 151 51.7
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 2.9e-28 129.0 133 59.4
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 1.4e-27 126.7 166 50.0
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 4.2e-27 125.2 86 80.2
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 7.2e-27 124.4 128 53.9
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 2.3e-25 119.4 85 74.1
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.2e-21 107.1 148 47.3
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 2.1e-18 96.3 79 58.2
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.6e-18 95.5 83 63.9
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 8.8e-17 90.9 134 40.3
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 8.8e-17 90.9 71 66.2
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 8.8e-17 90.9 71 66.2
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 1.1e-16 90.5 78 64.1
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 1.7e-15 86.7 79 57.0
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 3.1e-14 82.4 144 41.0
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 9.1e-14 80.9 71 59.2
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.2e-13 80.5 69 55.1
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.2e-13 80.5 69 60.9
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.6e-13 80.1 69 59.4
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.0e-13 79.7 69 59.4
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 7.2e-11 71.2 72 51.4
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 1.2e-10 70.5 72 51.4
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 8.0e-10 67.8 124 42.7
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 6.7e-09 64.7 72 47.2
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 4.4e-08 62.0 70 47.1


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