Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025159 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 1.7e-42 175.6 89 100.0
CSS0040514 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 3.8e-39 164.5 89 95.5
CSS0027414 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D000991 2.7e-37 158.3 89 89.9
CSS0019716 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 4.5e-32 141.0 89 83.1
CSS0047077 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 8.0e-21 103.6 108 56.5
CSS0041374 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 7.5e-19 97.1 89 59.6
Dinv03970 Davidia involucrata HOM05D001126 ORTHO05D000991 4.2e-14 81.3 85 55.3
Dinv06808 Davidia involucrata HOM05D001126 ORTHO05D000991 4.2e-14 81.3 85 55.3
Dinv06803 Davidia involucrata HOM05D001126 ORTHO05D000991 5.5e-14 80.9 85 56.5
Dinv21624 Davidia involucrata HOM05D001126 ORTHO05D000991 7.2e-14 80.5 85 54.1
CSS0006314 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D012932 1.2e-13 79.7 89 53.9
Hma1.2p1_1814F.1_g303920 Hydrangea macrophylla HOM05D001126 ORTHO05D012932 4.7e-13 77.8 89 52.8
Actinidia02123 Actinidia chinensis HOM05D001126 ORTHO05D000991 8.0e-13 77.0 85 51.8
Hma1.2p1_0916F.1_g236460 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.4e-12 76.3 88 50.0
Hma1.2p1_1395F.1_g280480 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 6.8e-12 73.9 88 48.9
Hma1.2p1_1395F.1_g280520 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 8.9e-12 73.6 87 49.4
Hma1.2p1_1430F.1_g282950 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.0e-11 72.4 80 53.8
Hma1.2p1_1395F.1_g280470 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.6e-11 72.0 84 46.4
Actinidia35914 Actinidia chinensis HOM05D001126 ORTHO05D000991 3.4e-11 71.6 77 50.6
Dinv10278 Davidia involucrata HOM05D001126 ORTHO05D000991 3.4e-11 71.6 77 54.5
Actinidia35911 Actinidia chinensis HOM05D003490 ORTHO05D000991 4.4e-11 71.2 86 47.7
Actinidia35915 Actinidia chinensis HOM05D001126 ORTHO05D000991 9.8e-11 70.1 77 54.5
Hma1.2p1_1635F.1_g294810 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 9.8e-11 70.1 85 51.8
Rhsim04G0033400 Rhododendron simsii HOM05D001126 ORTHO05D000991 9.8e-11 70.1 84 47.6
Dinv21625 Davidia involucrata HOM05D001126 ORTHO05D000991 1.3e-10 69.7 85 55.3
Hma1.2p1_1395F.1_g280460 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.3e-10 69.7 88 48.9
Hma1.2p1_1395F.1_g280490 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.3e-10 69.7 88 47.7
Hma1.2p1_3173F.1_g333590 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.8e-10 68.6 85 49.4
vmacro23133 Vaccinium macrocarpon HOM05D001126 ORTHO05D000991 2.8e-10 68.6 85 45.9
Hma1.2p1_1814F.1_g303925 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 6.3e-10 67.4 88 46.6
Hma1.2p1_1990F.1_g310180 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 6.3e-10 67.4 88 46.6
Hma1.2p1_1990F.1_g310170 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 8.3e-10 67.0 88 46.6
Rhsim07G0176400 Rhododendron simsii HOM05D001126 ORTHO05D000991 8.3e-10 67.0 83 47.0
Rhsim11G0051500 Rhododendron simsii HOM05D001126 ORTHO05D000991 8.3e-10 67.0 83 48.2
vmacro09047 Vaccinium macrocarpon HOM05D001126 ORTHO05D000991 1.4e-09 66.2 83 45.8
Hma1.2p1_2031F.1_g311810 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.4e-09 65.5 79 50.6
Rhsim04G0107300 Rhododendron simsii HOM05D001126 ORTHO05D000991 2.4e-09 65.5 84 44.0
TAR629G0685 Trochodendron aralioides HOM05D001126 ORTHO05D000991 2.4e-09 65.5 73 52.1
Rhsim04G0107100 Rhododendron simsii HOM05D001126 ORTHO05D000991 4.1e-09 64.7 80 47.5
Hma1.2p1_1635F.1_g294780 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 5.4e-09 64.3 58 56.9
Cfa007765 Carpinus fangiana HOM05D001126 ORTHO05D000991 9.2e-09 63.5 85 48.2
Hma1.2p1_1814F.1_g303930 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 9.2e-09 63.5 88 45.5
Hma1.2p1_0916F.1_g236495 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.2e-08 63.2 71 52.1
Hma1.2p1_1814F.1_g303910 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 1.2e-08 63.2 85 45.9
Haze_14308 Corylus avellana HOM05D001126 ORTHO05D000991 1.6e-08 62.8 85 47.1
Dinv21623 Davidia involucrata HOM05D001126 ORTHO05D000991 1.6e-08 62.8 52 65.4
Rhsim04G0106900 Rhododendron simsii HOM05D001126 ORTHO05D000991 1.6e-08 62.8 83 45.8
Hma1.2p1_3357F.1_g335540 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 2.0e-08 62.4 88 45.5
CiPaw.11G153000 Carya illinoinensis HOM05D001126 ORTHO05D000991 3.5e-08 61.6 85 44.7
Lj2C216T3 Lonicera japonica HOM05D001126 ORTHO05D000991 3.5e-08 61.6 58 56.9
Rhsim04G0107800 Rhododendron simsii HOM05D001126 ORTHO05D000991 3.5e-08 61.6 83 45.8
Hma1.2p1_0916F.1_g236480 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 5.9e-08 60.8 68 54.4
Lsat_1_v5_gn_1_46340 Lactuca sativa HOM05D001126 ORTHO05D000991 5.9e-08 60.8 75 46.7
Migut.O00103 Erythranthe guttata HOM05D001126 ORTHO05D000991 7.8e-08 60.5 75 49.3
Lj8C261T5 Lonicera japonica HOM05D001126 ORTHO05D012932 1.0e-07 60.1 61 55.7
Cpa.g.sc29.141 Carica papaya HOM05D001126 ORTHO05D000991 1.3e-07 59.7 84 40.5
Lsat_1_v5_gn_1_46280 Lactuca sativa HOM05D001126 ORTHO05D000991 1.7e-07 59.3 77 45.5
Lj2C216T2 Lonicera japonica HOM05D001126 ORTHO05D000991 2.3e-07 58.9 85 43.5
vmacro02651 Vaccinium macrocarpon HOM05D001126 ORTHO05D012932 2.3e-07 58.9 92 42.4
ECA248G3845 Erigeron canadensis HOM05D001126 ORTHO05D000991 2.9e-07 58.5 74 40.5
Lsat_1_v5_gn_6_40281 Lactuca sativa HOM05D001126 ORTHO05D000991 2.9e-07 58.5 61 50.8
Dinv06805 Davidia involucrata HOM05D001126 ORTHO05D000991 3.9e-07 58.2 51 62.7
Lsat_1_v5_gn_1_46240 Lactuca sativa HOM05D001126 ORTHO05D000991 3.9e-07 58.2 75 44.0
Atru.chr9.1328 Acer truncatum HOM05D001126 ORTHO05D000991 5.0e-07 57.8 86 43.0
Hma1.2p1_1814F.1_g303900 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 5.0e-07 57.8 71 49.3
Hma1.2p1_2370F.1_g320790 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 5.0e-07 57.8 71 49.3
Lj8C261T1 Lonicera japonica HOM05D001126 ORTHO05D000991 5.0e-07 57.8 85 44.7
Oeu016891.1 Olea europaea HOM05D001126 ORTHO05D000991 5.0e-07 57.8 85 40.0
Oeu016895.1 Olea europaea HOM05D001126 ORTHO05D000991 5.0e-07 57.8 85 38.8
TWI81G0441 Tripterygium wilfordii HOM05D001126 ORTHO05D000991 5.0e-07 57.8 85 41.2
Dinv21539 Davidia involucrata HOM05D001126 ORTHO05D000991 6.6e-07 57.4 85 47.1
ECA248G2315 Erigeron canadensis HOM05D001126 ORTHO05D000991 6.6e-07 57.4 80 40.0
ECA248G2329 Erigeron canadensis HOM05D001126 ORTHO05D000991 6.6e-07 57.4 72 41.7
Migut.O00111 Erythranthe guttata HOM05D001126 ORTHO05D000991 6.6e-07 57.4 60 51.7
Lsat_1_v5_gn_6_39441 Lactuca sativa HOM05D001126 ORTHO05D000991 8.6e-07 57.0 61 50.8
Rhsim04G0107200 Rhododendron simsii HOM05D001126 ORTHO05D000991 8.6e-07 57.0 85 41.2
CiPaw.12G108900 Carya illinoinensis HOM05D001126 ORTHO05D000991 1.1e-06 56.6 85 42.4
FAN11G0525 Fragaria x ananassa HOM05D001126 ORTHO05D000991 1.5e-06 56.2 86 41.9
Lsat_1_v5_gn_1_46500 Lactuca sativa HOM05D001126 ORTHO05D000991 1.5e-06 56.2 79 41.8
Oeu050141.1 Olea europaea HOM05D001126 ORTHO05D000991 1.5e-06 56.2 85 38.8
Migut.O00102 Erythranthe guttata HOM05D001126 ORTHO05D000991 1.9e-06 55.8 87 41.4
HanXRQChr17g0545681 Helianthus annuus HOM05D001126 ORTHO05D000991 1.9e-06 55.8 75 41.3
Lsat_1_v5_gn_1_43181 Lactuca sativa HOM05D001126 ORTHO05D000991 1.9e-06 55.8 79 40.5
Lsat_1_v5_gn_6_39901 Lactuca sativa HOM05D001126 ORTHO05D000991 1.9e-06 55.8 61 49.2
Rhsim04G0107000 Rhododendron simsii HOM05D001126 ORTHO05D000991 1.9e-06 55.8 85 40.0
Rhsim04G0107500 Rhododendron simsii HOM05D001126 ORTHO05D000991 1.9e-06 55.8 85 41.2
Duzib205G0781 Durio zibethinus HOM05D001126 ORTHO05D000991 2.5e-06 55.5 86 39.5
Migut.O00101 Erythranthe guttata HOM05D001126 ORTHO05D000991 2.5e-06 55.5 75 45.3
Lsat_1_v5_gn_1_46400 Lactuca sativa HOM05D001126 ORTHO05D000991 2.5e-06 55.5 79 41.8
Lj8P260T34 Lonicera japonica HOM05D001126 ORTHO05D000991 2.5e-06 55.5 85 40.0
Haze_21287 Corylus avellana HOM05D001126 ORTHO05D000991 3.3e-06 55.1 89 43.8
FvH4_3g26880 Fragaria vesca HOM05D001126 ORTHO05D000991 3.3e-06 55.1 86 40.7
Hma1.2p1_1635F.1_g294800 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 3.3e-06 55.1 52 55.8
Hma1.2p1_3207F.1_g333980 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 3.3e-06 55.1 52 55.8
Rhsim04G0107700 Rhododendron simsii HOM05D001126 ORTHO05D000991 3.3e-06 55.1 65 46.2
ECA248G2886 Erigeron canadensis HOM05D001126 ORTHO05D000991 4.3e-06 54.7 80 43.8
Lsat_1_v5_gn_1_43221 Lactuca sativa HOM05D001126 ORTHO05D000991 4.3e-06 54.7 79 41.8
Eucgr.D02066 Eucalyptus grandis HOM05D001126 ORTHO05D000991 5.6e-06 54.3 76 42.1
Lsat_1_v5_gn_1_46560 Lactuca sativa HOM05D001126 ORTHO05D000991 5.6e-06 54.3 76 43.4
Lsat_1_v5_gn_6_40621 Lactuca sativa HOM05D001126 ORTHO05D000991 5.6e-06 54.3 61 47.5
Actinidia05201 Actinidia chinensis HOM05D001126 ORTHO05D000991 7.3e-06 53.9 61 47.5
Hma1.2p1_3173F.1_g333600 Hydrangea macrophylla HOM05D001126 ORTHO05D000991 7.3e-06 53.9 52 55.8
Oeu016890.1 Olea europaea HOM05D001126 ORTHO05D000991 7.3e-06 53.9 85 41.2
Cc08_g12620 Coffea canephora HOM05D001126 ORTHO05D000991 9.5e-06 53.5 79 41.8
FAN16G0079 Fragaria x ananassa HOM05D001126 ORTHO05D000991 9.5e-06 53.5 86 39.5
FAN25G1129 Fragaria x ananassa HOM05D001126 ORTHO05D000991 9.5e-06 53.5 86 39.5
RcHm_v2.0_Chr7g0202961 Rosa chinensis HOM05D001126 ORTHO05D000991 9.5e-06 53.5 86 38.4
SGA_v2.0_scaffold25G10833 Striga asiatica HOM05D001126 ORTHO05D000991 9.5e-06 53.5 76 40.8


User provided reference genes

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