Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025139 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 5.2e-41 170.6 87 100.0
CSS0002638 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 5.8e-40 167.2 87 98.9
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.5e-27 125.9 104 66.3
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.6e-26 122.5 104 64.4
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 8.1e-26 120.2 104 63.5
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 8.1e-10 67.0 90 45.6
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-09 66.6 103 44.7
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.8e-09 65.9 100 45.0
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.9e-09 63.9 101 43.6
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-08 63.2 100 44.0
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.4e-08 61.2 89 43.8
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.4e-08 61.2 99 40.4
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.6e-08 60.5 100 39.0
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-07 59.7 92 41.3
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.9e-07 57.8 100 39.0
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.4e-07 57.4 96 36.5
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.4e-07 57.4 100 38.0
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 8.4e-07 57.0 96 36.5
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-06 56.6 98 39.8
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.4e-06 56.2 83 41.0
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.4e-06 56.2 96 35.4
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.4e-06 56.2 95 36.8
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.2e-06 55.1 96 34.4
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 4.2e-06 54.7 97 34.0
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 7.1e-06 53.9 90 38.9


User provided reference genes

Program Settings