Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025136 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 2.1e-74 282.3 151 100.0
CSS0035317 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 4.8e-66 254.6 179 77.7
CSS0014725 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 2.4e-65 252.3 178 80.9
CSS0002990 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 4.0e-65 251.5 181 80.7
Dinv14174 Davidia involucrata HOM05D004142 ORTHO05D005411 2.4e-41 172.6 184 53.8
Nitab4.5_0005657g0020 Nicotiana tabacum HOM05D004142 ORTHO05D005411 3.1e-41 172.2 151 63.6
Nitab4.5_0001700g0140 Nicotiana tabacum HOM05D004142 ORTHO05D005411 5.3e-41 171.4 157 61.8
Rhsim11G0198100 Rhododendron simsii HOM05D004142 ORTHO05D005411 7.6e-40 167.5 166 55.4
Lj5C171T17 Lonicera japonica HOM05D004142 ORTHO05D005411 8.5e-39 164.1 186 50.5
TAR633G0693 Trochodendron aralioides HOM05D004142 ORTHO05D005411 8.5e-39 164.1 187 52.4
vmacro02340 Vaccinium macrocarpon HOM05D004142 ORTHO05D005411 1.1e-38 163.7 183 55.2
Actinidia20577 Actinidia chinensis HOM05D004142 ORTHO05D005411 5.5e-38 161.4 185 53.0
Actinidia17993 Actinidia chinensis HOM05D004142 ORTHO05D005411 2.1e-37 159.5 185 53.0
CANSAT25G0210 Cannabis sativa HOM05D004142 ORTHO05D005411 2.7e-37 159.1 185 49.7
MD05G1138800 Malus domestica HOM05D004142 ORTHO05D005411 4.6e-37 158.3 154 55.8
AL3G50110 Arabidopsis lyrata HOM05D004142 ORTHO05D005411 1.8e-36 156.4 188 47.3
CAN.G765.24 Capsicum annuum HOM05D004142 ORTHO05D005411 2.3e-36 156.0 162 54.3
Oeu037462.1 Olea europaea HOM05D004142 ORTHO05D005411 3.0e-36 155.6 165 52.1
Cpa.g.sc60.19 Carica papaya HOM05D004142 ORTHO05D005411 3.9e-36 155.2 189 49.2
Solyc10g074560.2 Solanum lycopersicum HOM05D004142 ORTHO05D005411 5.1e-36 154.8 186 51.1
QL11p056391 Quercus lobata HOM05D004142 ORTHO05D005411 1.1e-35 153.7 184 52.7
Sopen10g027050 Solanum pennellii HOM05D004142 ORTHO05D005411 1.1e-35 153.7 186 50.5
Carub.0003s3119 Capsella rubella HOM05D004142 ORTHO05D005411 1.9e-35 152.9 187 46.0
Prupe.8G180000 Prunus persica HOM05D004142 ORTHO05D005411 1.9e-35 152.9 185 48.6
TAR318G0001 Trochodendron aralioides HOM05D004142 ORTHO05D005411 3.3e-35 152.1 131 64.1
MD10G1141700 Malus domestica HOM05D004142 ORTHO05D005411 5.7e-35 151.4 185 47.6
GSVIVG01004114001 Vitis vinifera HOM05D004142 ORTHO05D005411 7.4e-35 151.0 180 52.2
Cfa005371 Carpinus fangiana HOM05D004142 ORTHO05D005411 1.3e-34 150.2 187 50.3
SGA_v2.0_scaffold98G29302 Striga asiatica HOM05D004142 ORTHO05D005411 1.3e-34 150.2 185 47.6
CARHR293590 Cardamine hirsuta HOM05D004142 ORTHO05D005411 1.6e-34 149.8 194 44.8
SalBow5G4664 Salvia bowleyana HOM05D004142 ORTHO05D005411 2.2e-34 149.4 183 51.4
Haze_02000 Corylus avellana HOM05D004142 ORTHO05D005411 2.8e-34 149.1 187 50.3
Peaxi162Scf01986g00004 Petunia axillaris HOM05D004142 ORTHO05D005411 2.8e-34 149.1 172 52.9
SalBow5G1400 Salvia bowleyana HOM05D004142 ORTHO05D005411 2.8e-34 149.1 184 51.1
Eucgr.G01885 Eucalyptus grandis HOM05D004142 ORTHO05D005411 4.8e-34 148.3 164 51.2
Eucgr.H04975 Eucalyptus grandis HOM05D004142 ORTHO05D005411 4.8e-34 148.3 164 51.2
Nn5g31006 Nelumbo nucifera HOM05D004142 ORTHO05D005411 4.8e-34 148.3 188 48.4
Thhalv10022610m.g Eutrema salsugineum HOM05D004142 ORTHO05D005411 6.3e-34 147.9 201 44.8
AT2G17250 Arabidopsis thaliana HOM05D004142 ORTHO05D005411 8.2e-34 147.5 180 47.8
Aa31LG8G14620 Aethionema arabicum HOM05D004142 ORTHO05D005411 1.1e-33 147.1 197 46.7
Sed0023655 Sechium edule HOM05D004142 ORTHO05D005411 1.4e-33 146.7 182 51.1
Sp3g30590 Schrenkiella parvula HOM05D004142 ORTHO05D005411 2.4e-33 146.0 199 45.7
RcHm_v2.0_Chr6g0280901 Rosa chinensis HOM05D004142 ORTHO05D005411 3.1e-33 145.6 185 46.5
TWI75G0433 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 3.1e-33 145.6 168 49.4
BcaB07g31738 Brassica carinata HOM05D004142 ORTHO05D005411 4.1e-33 145.2 196 44.4
C09p13280 Brassica napus HOM05D004142 ORTHO05D005411 5.3e-33 144.8 205 43.4
BolC9t54221H Brassica oleracea HOM05D004142 ORTHO05D005411 5.3e-33 144.8 205 43.4
Potri.009G168100 Populus trichocarpa HOM05D004142 ORTHO05D005411 1.2e-32 143.7 167 46.7
PGR042G3440 Punica granatum HOM05D004142 ORTHO05D005411 1.5e-32 143.3 166 49.4
FAN24G0393 Fragaria x ananassa HOM05D004142 ORTHO05D005411 2.6e-32 142.5 181 44.8
Thecc.02G146100 Theobroma cacao HOM05D004142 ORTHO05D005411 2.6e-32 142.5 188 45.2
Atru.chr3.3247 Acer truncatum HOM05D004142 ORTHO05D005411 3.4e-32 142.1 188 45.2
CiPaw.06G115400 Carya illinoinensis HOM05D004142 ORTHO05D005411 3.4e-32 142.1 188 48.4
FAN15G2670 Fragaria x ananassa HOM05D004142 ORTHO05D005411 3.4e-32 142.1 183 44.3
FvH4_2g16780 Fragaria vesca HOM05D004142 ORTHO05D005411 7.7e-32 141.0 181 44.2
Sabra09G0130600 Salix brachista HOM05D004142 ORTHO05D005852 1.3e-31 140.2 167 46.7
Ah.05g178840 Amaranthus hybridus HOM05D004142 ORTHO05D005411 1.7e-31 139.8 168 46.4
MSTRG.27614 Avicennia marina HOM05D004142 ORTHO05D005411 1.7e-31 139.8 167 47.9
Ciclev10028022m.g Citrus clementina HOM05D004142 ORTHO05D005411 2.2e-31 139.4 173 48.0
COL.COLO4_34310 Corchorus olitorius HOM05D004142 ORTHO05D005411 2.2e-31 139.4 187 45.5
Duzib052G0377 Durio zibethinus HOM05D004142 ORTHO05D005411 3.8e-31 138.7 188 44.1
Manes.04G066800 Manihot esculenta HOM05D004142 ORTHO05D005411 3.8e-31 138.7 166 49.4
BraA09t36766Z Brassica rapa HOM05D004142 ORTHO05D005411 5.0e-31 138.3 197 42.6
Gohir.A13G065000 Gossypium hirsutum HOM05D004142 ORTHO05D005411 8.5e-31 137.5 188 45.2
GSVIVG01004442001 Vitis vinifera HOM05D004142 ORTHO05D005411 1.1e-30 137.1 139 58.3
BcaC04g22983 Brassica carinata HOM05D004142 ORTHO05D005411 1.9e-30 136.3 203 42.4
A07p03800 Brassica napus HOM05D004142 ORTHO05D005411 1.9e-30 136.3 198 41.9
Ca_05793_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 1.9e-30 136.3 166 46.4
CsaV3_7G001920 Cucumis sativus L. HOM05D004142 ORTHO05D005411 4.2e-30 135.2 164 49.4
Phvul.008G235900 Phaseolus vulgaris HOM05D004142 ORTHO05D005411 4.2e-30 135.2 167 47.3
Sc08g0002210 Simmondsia chinensis HOM05D004142 ORTHO05D005411 5.5e-30 134.8 162 47.5
Aqoxy6G01597 Aquilegia oxysepala HOM05D004142 ORTHO05D005411 7.2e-30 134.4 186 44.1
BcaB03g16472 Brassica carinata HOM05D004142 ORTHO05D005411 7.2e-30 134.4 183 44.3
Glyma.14G215500 Glycine max HOM05D004142 ORTHO05D005411 7.2e-30 134.4 169 45.0
BraA07t28174Z Brassica rapa HOM05D004142 ORTHO05D005411 9.4e-30 134.0 198 41.4
A09p11250 Brassica napus HOM05D004142 ORTHO05D005411 1.2e-29 133.7 198 41.9
Gohir.D13G057300 Gossypium hirsutum HOM05D004142 ORTHO05D005411 1.2e-29 133.7 188 44.1
CSS0034003 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 1.6e-29 133.3 148 62.2
Glyma.02G245400 Glycine max HOM05D004142 ORTHO05D005411 2.1e-29 132.9 164 46.3
Migut.B01359 Erythranthe guttata HOM05D004142 ORTHO05D005411 2.7e-29 132.5 167 48.5
Gorai.013G064000 Gossypium raimondii HOM05D004142 ORTHO05D005411 2.7e-29 132.5 188 43.1
THA.LOC104819692 Tarenaya hassleriana HOM05D004142 ORTHO05D005411 3.6e-29 132.1 156 52.6
EL10Ac9g21530 Beta vulgaris HOM05D004142 ORTHO05D005411 4.6e-29 131.7 170 45.3
Ca_01556_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 4.6e-29 131.7 163 46.6
Psat2g043640 Pisum sativum HOM05D004142 ORTHO05D005411 4.6e-29 131.7 165 45.5
TWI31G1182 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 4.6e-29 131.7 115 59.1
ClCG02G003400 Citrullus lanatus HOM05D004142 ORTHO05D005411 1.0e-28 130.6 169 46.7
MELO3C013248.2 Cucumis melo HOM05D004142 ORTHO05D005411 1.0e-28 130.6 169 49.7
Hund06363 Selenicereus undatus HOM05D004142 ORTHO05D005411 1.4e-28 130.2 167 44.3
Lsat_1_v5_gn_5_183861 Lactuca sativa HOM05D004142 ORTHO05D005411 1.8e-28 129.8 175 43.4
Lalb_Chr04g0251341 Lupinus albus HOM05D004142 ORTHO05D005411 3.0e-28 129.0 177 47.5
CDE05G3311 Ceratophyllum demersum HOM05D004142 ORTHO05D005411 6.7e-28 127.9 167 40.7
VMungo0647G1269 Vigna mungo HOM05D004142 ORTHO05D005411 2.0e-27 126.3 170 44.1
DCAR_005486 Daucus carota HOM05D004142 ORTHO05D005411 2.2e-26 122.9 165 42.4
ECA233G5375 Erigeron canadensis HOM05D004142 ORTHO05D005411 4.8e-26 121.7 174 42.5
HanXRQChr09g0239911 Helianthus annuus HOM05D004142 ORTHO05D005411 1.1e-25 120.6 157 45.2
TPR.G8874 Trifolium pratense HOM05D004142 ORTHO05D005411 1.8e-25 119.8 165 43.0
Medtr5g078780 Medicago truncatula HOM05D004142 ORTHO05D005411 2.4e-25 119.4 166 40.4
Cc09_g10830 Coffea canephora HOM05D004142 ORTHO05D005411 5.3e-25 118.2 172 43.6
HanXRQChr16g0515111 Helianthus annuus HOM05D004142 ORTHO05D005411 5.3e-25 118.2 163 42.9
arahy.Tifrunner.gnm1.ann1.FRA838 Arachis hypogaea HOM05D004142 ORTHO05D005411 9.1e-25 117.5 171 39.2
LjContig00141g0017492 Lotus japonicus HOM05D004142 ORTHO05D005411 3.4e-24 115.5 183 45.9
SHI03796 Sapria himalayana HOM05D004142 ORTHO05D005411 5.9e-24 114.8 184 38.0
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 1.0e-23 114.0 162 45.7
arahy.Tifrunner.gnm1.ann1.52DH7S Arachis hypogaea HOM05D004142 ORTHO05D005411 1.7e-23 113.2 172 39.5
HPP92_025663 Vanilla planifolia HOM05D004142 ORTHO05D005411 3.8e-23 112.1 166 42.2
ATR0807G091 Amborella trichopoda HOM05D004142 ORTHO05D005411 4.2e-22 108.6 173 35.3
arahy.Tifrunner.gnm1.ann1.0H97XI Arachis hypogaea HOM05D004142 ORTHO05D005411 1.6e-21 106.7 172 36.6
TAR381G0855 Trochodendron aralioides HOM05D004142 ORTHO05D005411 1.5e-19 100.1 148 40.5
AUR62013175 Chenopodium quinoa HOM05D004142 ORTHO05D005411 5.7e-19 98.2 177 34.5
Os04g0585300 Oryza sativa ssp. japonica HOM05D004142 ORTHO05D005411 7.4e-19 97.8 162 36.4
Zm00001eb428130 Zea mays HOM05D004142 ORTHO05D005411 3.7e-18 95.5 162 34.6
PSO541G0415 Papaver somniferum HOM05D004142 ORTHO05D005411 6.3e-18 94.7 129 40.3
BcaC04g22984 Brassica carinata HOM05D004142 ORTHO05D005411 8.2e-18 94.4 101 52.5
PSO675G0945 Papaver somniferum HOM05D004142 ORTHO05D005411 1.8e-17 93.2 115 43.5
C07p06050 Brassica napus HOM05D004142 ORTHO05D005411 5.3e-17 91.7 179 34.6
MD11G1014300 Malus domestica HOM05D004142 ORTHO05D005411 2.0e-16 89.7 87 59.8
BolC7t41018H Brassica oleracea HOM05D004142 ORTHO05D005411 3.5e-16 89.0 142 36.6
BcaC06g36246 Brassica carinata HOM05D004142 ORTHO05D005411 1.0e-15 87.4 126 42.1
Atru.chr5.3556 Acer truncatum HOM05D004142 ORTHO05D005411 9.4e-14 80.9 162 32.7
BcaB07g31742 Brassica carinata HOM05D004142 ORTHO05D005411 2.3e-12 76.3 146 38.4
BcaB07g31740 Brassica carinata HOM05D004142 ORTHO05D005411 4.1e-09 65.5 89 39.3
Mapoly0043s0054 Marchantia polymorpha HOM05D004142 ORTHO05D005411 7.0e-09 64.7 163 28.8
SEGI_29991 Sequoiadendron giganteum HOM05D004142 ORTHO05D031210 7.0e-09 64.7 178 28.7
BcaB07g31739 Brassica carinata HOM05D004142 ORTHO05D005411 9.1e-09 64.3 203 30.0
SEGI_00997 Sequoiadendron giganteum HOM05D004142 ORTHO05D031210 2.7e-08 62.8 123 34.1


User provided reference genes

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