Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025071 Camellia sinensis var. sinensis HOM05D007913 ORTHO05D009599 7.2e-44 180.6 124 100.0
Rhsim12G0143600 Rhododendron simsii HOM05D007913 ORTHO05D009599 2.7e-19 99.0 86 65.1
Actinidia18937 Actinidia chinensis HOM05D010627 ORTHO05D009599 3.6e-19 98.6 88 67.0
vmacro16450 Vaccinium macrocarpon HOM05D010627 ORTHO05D009599 6.1e-19 97.8 90 64.4
Hma1.2p1_1001F.1_g246480 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 3.4e-17 92.0 78 66.7
Actinidia35085 Actinidia chinensis HOM05D010627 ORTHO05D013125 4.8e-16 88.2 86 62.8
Dinv09801 Davidia involucrata HOM05D007913 ORTHO05D009599 7.0e-15 84.3 77 62.3
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 7.2e-12 74.3 81 59.3
Manes.05G137750 Manihot esculenta HOM05D021252 ORTHO05D012395 9.4e-12 73.9 96 52.1
Rhsim12G0143700 Rhododendron simsii HOM05D001813 ORTHO05D009599 2.7e-11 72.4 71 60.6
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 6.1e-11 71.2 84 56.0
Manes.01G012300 Manihot esculenta HOM05D021252 ORTHO05D012395 2.3e-10 69.3 93 48.4
Thecc.03G034200 Theobroma cacao HOM05D021252 ORTHO05D012395 8.8e-10 67.4 99 47.5
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 2.0e-09 66.2 61 62.3
Ciclev10033117m.g Citrus clementina HOM05D013794 ORTHO05D009599 1.7e-08 63.2 82 51.2
Dinv28091 Davidia involucrata HOM05D007913 ORTHO05D009599 2.2e-08 62.8 44 77.3
Cc04_g07190 Coffea canephora HOM05D010627 ORTHO05D013125 3.7e-08 62.0 76 51.3
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 8.3e-08 60.8 85 49.4
MSTRG.4515 Avicennia marina HOM05D019774 ORTHO05D018531 1.1e-07 60.5 86 51.2
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 1.8e-07 59.7 86 47.7
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 2.4e-07 59.3 89 42.7
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 3.1e-07 58.9 82 43.9
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 4.1e-07 58.5 88 45.5
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 4.1e-07 58.5 94 43.6
Oeu006381.1 Olea europaea HOM05D010627 ORTHO05D013125 5.4e-07 58.2 80 45.0
Potri.008G119900 Populus trichocarpa HOM05D013794 ORTHO05D009599 5.4e-07 58.2 83 42.2
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 5.4e-07 58.2 95 43.2
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 9.2e-07 57.4 101 46.5
CiPaw.16G064300 Carya illinoinensis HOM05D007913 ORTHO05D009599 2.0e-06 56.2 85 43.5
CiPaw.16G064400 Carya illinoinensis HOM05D007913 ORTHO05D009599 2.7e-06 55.8 93 43.0
QL01p043322 Quercus lobata HOM05D013794 ORTHO05D009599 2.7e-06 55.8 78 44.9
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 2.7e-06 55.8 96 39.6
Sabra08G0090900 Salix brachista HOM05D013794 ORTHO05D009599 2.7e-06 55.8 84 44.0
RcHm_v2.0_Chr4g0435331 Rosa chinensis HOM05D007913 ORTHO05D009599 3.5e-06 55.5 82 40.2
Haze_06703 Corylus avellana HOM05D023498 ORTHO05D012395 5.9e-06 54.7 46 69.6


User provided reference genes

Program Settings