Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 1.2e-109 400.2 261 100.0
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 1.2e-109 400.2 261 100.0
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 3.3e-67 259.2 255 72.5
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 3.3e-67 259.2 264 71.2
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 7.4e-67 258.1 255 72.2
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 3.8e-63 245.7 251 64.5
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 4.0e-60 235.7 259 54.8
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 5.7e-59 231.9 260 63.5
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 2.8e-58 229.6 268 59.0
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 4.8e-58 228.8 257 65.0
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 4.8e-58 228.8 259 54.8
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 2.4e-57 226.5 259 66.4
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 9.1e-57 224.6 260 63.8
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 1.2e-56 224.2 259 60.2
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 2.7e-56 223.0 260 53.8
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 2.7e-56 223.0 259 56.0
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 3.5e-56 222.6 262 63.0
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 3.5e-56 222.6 259 57.5
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 7.7e-56 221.5 259 60.2
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 7.7e-56 221.5 256 63.3
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 1.0e-55 221.1 259 58.3
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.3e-55 220.7 259 58.3
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.1e-54 217.6 259 57.9
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.5e-54 217.2 259 62.2
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 3.2e-54 216.1 258 60.5
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 5.5e-54 215.3 262 63.7
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 5.5e-54 215.3 259 65.6
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 1.6e-53 213.8 264 63.6
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 1.6e-53 213.8 258 49.6
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 3.6e-53 212.6 262 62.6
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 2.3e-52 209.9 265 53.6
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 3.0e-52 209.5 259 60.2
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 4.0e-52 209.1 259 63.3
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 5.2e-52 208.8 258 62.8
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 1.2e-51 207.6 265 61.1
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 2.6e-51 206.5 262 51.5
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 2.6e-51 206.5 258 63.2
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 2.6e-51 206.5 258 62.4
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 4.4e-51 205.7 264 58.7
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 1.3e-50 204.1 264 59.8
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 1.7e-50 203.8 201 56.7
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 2.8e-50 203.0 254 59.1
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 4.8e-50 202.2 259 48.3
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 6.3e-50 201.8 259 56.8
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 8.3e-50 201.4 258 61.6
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 8.3e-50 201.4 258 61.6
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 8.3e-50 201.4 254 48.8
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 1.4e-49 200.7 258 48.4
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 1.8e-49 200.3 258 61.6
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 2.4e-49 199.9 258 64.7
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 2.4e-49 199.9 260 58.1
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 2.4e-49 199.9 207 68.6
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 9.1e-49 198.0 202 67.8
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 1.2e-48 197.6 254 58.7
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 1.6e-48 197.2 279 56.3
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 2.7e-48 196.4 255 59.6
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 2.7e-48 196.4 259 61.4
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 5.9e-48 195.3 258 60.9
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 1.0e-47 194.5 265 49.8
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 1.0e-47 194.5 259 50.2
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 1.3e-47 194.1 258 55.0
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 2.2e-47 193.4 252 49.6
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 2.2e-47 193.4 254 57.1
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 3.8e-47 192.6 263 60.1
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 6.5e-47 191.8 279 55.9
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 8.5e-47 191.4 261 61.3
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 1.9e-46 190.3 256 60.5
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 2.5e-46 189.9 210 63.3
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 2.5e-46 189.9 259 50.2
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 3.2e-46 189.5 259 45.9
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 9.4e-46 188.0 254 59.4
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 1.6e-45 187.2 266 59.0
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 3.6e-45 186.0 259 45.9
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 6.1e-45 185.3 259 47.5
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 1.4e-44 184.1 259 54.1
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 2.3e-44 183.3 259 59.5
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 3.0e-44 183.0 259 44.8
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 3.0e-44 183.0 261 56.3
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 3.0e-44 183.0 262 56.9
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 4.0e-44 182.6 210 61.9
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 4.0e-44 182.6 261 44.4
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 6.8e-44 181.8 260 55.4
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 1.5e-43 180.6 265 55.1
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 3.4e-43 179.5 215 58.6
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 5.7e-43 178.7 262 57.6
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 7.5e-43 178.3 258 56.6
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 1.7e-42 177.2 260 43.1
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.1e-41 174.5 232 58.6
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 1.4e-41 174.1 260 43.5
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 4.1e-41 172.6 259 43.6
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 1.2e-40 171.0 251 43.4
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 1.6e-40 170.6 261 41.8
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 2.0e-40 170.2 254 46.5
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 3.5e-40 169.5 262 52.7
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 3.5e-40 169.5 191 64.4
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 5.9e-40 168.7 233 54.9
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 1.3e-39 167.5 145 60.7
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 1.1e-38 164.5 249 43.0
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 1.5e-38 164.1 259 52.9
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 1.5e-38 164.1 265 54.3
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 1.9e-38 163.7 206 49.5
Actinidia05342 Actinidia chinensis HOM05D005866 ORTHO05D007078 3.3e-38 162.9 196 61.7
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 3.3e-38 162.9 251 50.6
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 3.3e-38 162.9 193 65.3
Peaxi162Scf00009g01923 Petunia axillaris HOM05D005866 ORTHO05D007078 4.3e-38 162.5 247 48.2
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 1.2e-37 161.0 262 58.0
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 2.8e-37 159.8 209 53.6
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 3.6e-37 159.5 144 63.2
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 1.8e-36 157.1 259 40.9
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 6.8e-36 155.2 127 69.3
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 8.9e-36 154.8 211 52.1
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 2.2e-34 150.2 150 62.7
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 3.7e-34 149.4 252 42.5
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 3.7e-34 149.4 252 42.5
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 1.1e-33 147.9 268 47.8
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 3.2e-33 146.4 218 43.1
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 1.0e-31 141.4 247 52.6
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 4.3e-30 136.0 194 56.7
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 6.2e-29 132.1 126 58.7
Actinidia01118 Actinidia chinensis HOM05D005866 ORTHO05D007078 7.8e-24 115.2 83 77.1
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 3.3e-22 109.8 142 45.1
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 1.8e-20 104.0 212 32.1
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 6.8e-20 102.1 210 31.4
Dinv37082 Davidia involucrata HOM05D005866 ORTHO05D007078 9.8e-19 98.2 98 58.2
Actinidia01119 Actinidia chinensis HOM05D005866 ORTHO05D007078 2.2e-18 97.1 87 64.4
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 2.9e-18 96.7 204 30.4
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 2.9e-18 96.7 202 29.7
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 1.9e-14 84.0 181 28.2
HanXRQChr10g0287001 Helianthus annuus HOM05D005866 ORTHO05D007078 1.8e-12 77.4 87 51.7
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 1.5e-11 74.3 228 29.4
Ah.07g199780 Amaranthus hybridus HOM05D005866 ORTHO05D007078 1.3e-10 71.2 80 52.5
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 6.4e-10 68.9 220 25.9
Pp3c20_9600 Physcomitrium patens HOM05D005866 ORTHO05D007078 5.4e-09 65.9 217 27.6
SGA_v2.0_scaffold1443G53951 Striga asiatica HOM05D005866 ORTHO05D007078 7.1e-09 65.5 87 49.4
Lalb_Chr03g0043011 Lupinus albus HOM05D005866 ORTHO05D007078 1.0e-07 61.6 85 44.7
ATR0618G115 Amborella trichopoda HOM05D005866 ORTHO05D007078 1.9e-06 57.4 87 42.5
Pp3c23_6870 Physcomitrium patens HOM05D005866 ORTHO05D007078 3.3e-06 56.6 195 24.6


User provided reference genes

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